Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0118

Experiment: carbon source a1-Acid Glycoprotein from bovine plasma 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source a1-Acid Glycoprotein from bovine plasma 10 mg/ml
108,134	+		BT0116	0.65	+0.3
108,161	+		BT0116	0.67	+0.1
108,163	+		BT0116	0.67	-0.1
108,164	-		BT0116	0.67	-0.7
108,167	+		BT0116	0.67	-1.0
108,202	-		BT0116	0.69	-1.7
108,326	+		BT0116	0.76	-0.9
108,380	+		BT0116	0.79	-0.7
108,381	-		BT0116	0.80	-0.4
108,528	-		BT0116	0.88	-0.5
108,533	+		BT0116	0.88	+2.2
108,534	-		BT0116	0.88	+0.4
108,534	-		BT0116	0.88	-0.2
108,687	+				-0.3
108,699	+				-0.4
108,705	+				-1.1
108,745	-				-0.1
108,760	+				-0.3
108,919	-		BT0117	0.49	-1.7
109,023	-		BT0117	0.81	-1.8
109,294	+		BT0118	0.25	-0.2
109,295	-		BT0118	0.25	-1.5
109,343	+		BT0118	0.32	-0.2
109,343	+		BT0118	0.32	-0.4
109,395	+		BT0118	0.39	-0.0
109,408	-		BT0118	0.41	+1.1
109,412	+		BT0118	0.41	-0.6
109,412	+		BT0118	0.41	-1.4
109,413	-		BT0118	0.42	-1.4
109,511	+		BT0118	0.55	-1.9
109,577	+		BT0118	0.65	-1.1
109,633	-		BT0118	0.73	-2.1
109,650	-		BT0118	0.75	-1.5
109,668	-		BT0118	0.78	-3.2
109,703	+		BT0118	0.82	-1.4
109,720	-		BT0118	0.85	-2.1
109,728	-		BT0118	0.86	-0.9
109,779	-				-1.2
109,830	-				-0.8
109,926	+		BT0119	0.22	-0.3
109,930	+		BT0119	0.23	+0.4
109,980	+		BT0119	0.34	-1.3
109,992	+		BT0119	0.37	-1.6
110,107	+		BT0119	0.63	-0.5
110,150	-		BT0119	0.73	-1.6
110,255	+				+0.8
110,287	+				+0.2
110,499	-				-0.5
110,610	+				-0.4
110,617	-				-1.2
110,617	-				-1.1
110,623	-		BT0121	0.11	+0.1
110,780	-		BT0121	0.69	-0.1
110,825	-		BT0121	0.86	+0.5
110,825	-		BT0121	0.86	-0.1