Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4695

Experiment: carbon source (+)-Arabinogalactan, Larch wood 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source (+)-Arabinogalactan, Larch wood 10 mg/ml
6,162,034	+		BT4694	0.69	-0.4
6,162,112	+		BT4694	0.72	-0.2
6,162,112	+		BT4694	0.72	-2.7
6,162,118	+		BT4694	0.72	-1.3
6,162,380	-		BT4694	0.80	-1.7
6,162,380	-		BT4694	0.80	-1.3
6,162,419	-		BT4694	0.82	-0.4
6,162,462	-		BT4694	0.83	+0.3
6,162,463	+		BT4694	0.83	-0.6
6,162,464	-		BT4694	0.83	-1.2
6,162,481	+		BT4694	0.84	-2.2
6,162,482	-		BT4694	0.84	-1.8
6,162,483	+		BT4694	0.84	-1.1
6,162,508	+		BT4694	0.84	-3.1
6,162,519	-		BT4694	0.85	-2.9
6,162,562	+		BT4694	0.86	-2.1
6,162,562	+		BT4694	0.86	-0.6
6,162,590	-		BT4694	0.87	+0.8
6,162,614	-		BT4694	0.88	-2.6
6,162,614	-		BT4694	0.88	-3.1
6,162,647	-		BT4694	0.89	-2.0
6,162,700	-				-1.2
6,162,744	+				-2.4
6,162,745	-				-2.1
6,162,745	-				-0.7
6,162,876	-				-1.9
6,162,899	-				-0.8
6,162,905	-				-2.7
6,162,983	-				-1.6
6,163,009	+				-2.1
6,163,165	+		BT4695	0.16	-1.6
6,163,166	-		BT4695	0.16	-0.4
6,163,243	-		BT4695	0.22	-1.2
6,163,243	-		BT4695	0.22	-2.1
6,163,280	+		BT4695	0.25	-1.6
6,163,280	+		BT4695	0.25	-0.3
6,163,402	+		BT4695	0.35	-1.6
6,163,403	-		BT4695	0.35	-1.6
6,163,417	-		BT4695	0.36	-2.6
6,163,425	-		BT4695	0.36	-1.9
6,163,425	-		BT4695	0.36	-3.4
6,163,428	+		BT4695	0.37	-0.4
6,163,428	+		BT4695	0.37	-1.5
6,163,523	+		BT4695	0.44	-0.2
6,163,523	+		BT4695	0.44	-0.0
6,163,610	+		BT4695	0.51	-0.9
6,163,637	-		BT4695	0.53	-1.8
6,163,637	-		BT4695	0.53	-0.6
6,163,725	-		BT4695	0.60	-1.6
6,163,789	-		BT4695	0.66	+0.8
6,163,833	-		BT4695	0.69	-2.1
6,163,833	-		BT4695	0.69	+0.4
6,163,843	+		BT4695	0.70	-0.8
6,163,844	-		BT4695	0.70	-1.9
6,163,844	-		BT4695	0.70	-1.5
6,164,059	+		BT4695	0.87	-1.1
6,164,060	-		BT4695	0.87	+0.1
6,164,099	-				-0.2
6,164,099	-				-0.9
6,164,114	+				-1.0
6,164,114	+				-2.4
6,164,115	-				-0.8
6,164,119	-				-1.2
6,164,209	+				-0.6
6,164,416	-				-0.1
6,164,444	+				+0.3
6,164,448	-				-0.0
6,164,533	+				-0.2
6,164,534	-				+0.6
6,164,538	-				-0.5
6,164,538	-				-0.8
6,164,540	+				-0.4
6,164,541	-				+0.2
6,164,642	+		BT4696	0.11	-0.4
6,164,646	+		BT4696	0.12	-0.6
6,164,731	+		BT4696	0.23	-0.1
6,164,909	+		BT4696	0.46	-0.8
6,164,950	+		BT4696	0.51	-0.4
6,165,085	+		BT4696	0.69	-0.3
6,165,096	+		BT4696	0.70	-0.2