Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3801

Experiment: carbon source Mucin from porcine stomach type III 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Mucin from porcine stomach type III 10 mg/ml
4,942,056	-		BT3800	0.79	-1.0
4,942,056	-		BT3800	0.79	-3.6
4,942,135	+		BT3800	0.81	-0.8
4,942,197	+		BT3800	0.82	+1.9
4,942,198	-		BT3800	0.82	-0.8
4,942,224	+		BT3800	0.83	-0.5
4,942,306	+		BT3800	0.85	-0.6
4,942,307	-		BT3800	0.85	-0.6
4,942,307	-		BT3800	0.85	-0.9
4,942,353	-		BT3800	0.86	-0.3
4,942,380	-		BT3800	0.87	-0.4
4,942,380	-		BT3800	0.87	-1.0
4,942,452	-		BT3800	0.89	-0.4
4,942,478	-		BT3800	0.89	+0.3
4,942,535	+				-0.4
4,942,610	+				-2.0
4,942,615	+				+0.6
4,942,615	+				+0.6
4,942,622	+				-0.4
4,942,643	+				-2.0
4,942,673	+				-0.4
4,942,685	+				-0.1
4,942,685	+				-0.8
4,942,727	+				+0.0
4,942,730	-				+0.4
4,942,730	-				-0.3
4,942,730	-				-1.2
4,942,733	+				-0.5
4,942,733	+				-0.3
4,942,734	-				+1.2
4,942,751	+				-0.5
4,942,751	+				-0.5
4,942,751	+				-0.4
4,942,751	+				-0.1
4,942,752	-				+0.0
4,942,752	-				-0.1
4,942,821	+				-0.8
4,942,880	+				+0.5
4,942,881	-				+0.3
4,942,881	-				+1.2
4,942,884	+				+0.7
4,942,884	+				-0.8
4,942,886	+				-0.4
4,942,887	-				-0.6
4,942,893	-				-0.9
4,942,910	+				-0.8
4,942,910	+				-1.2
4,942,942	-				-1.0
4,942,943	+				-0.7
4,943,153	-		BT3801	0.18	-1.6
4,943,501	-		BT3801	0.43	-0.7
4,943,593	-		BT3801	0.50	-0.6
4,943,593	-		BT3801	0.50	+1.0
4,943,984	+		BT3801	0.78	+1.6
4,944,136	+		BT3801	0.89	+1.6
4,944,137	-		BT3801	0.89	-0.4
4,944,390	+				-0.4
4,944,393	+				-1.0
4,944,393	+				+0.0
4,944,508	+		BT3802	0.16	-0.3
4,944,508	+		BT3802	0.16	-0.1
4,944,800	+		BT3802	0.51	+0.1
4,944,957	-		BT3802	0.70	-0.4
4,945,056	-		BT3802	0.82	-0.2
4,945,064	-		BT3802	0.82	+1.2
4,945,064	-		BT3802	0.82	-1.0
4,945,085	+		BT3802	0.85	-0.4
4,945,104	+		BT3802	0.87	-0.2
4,945,224	+				-0.4
4,945,233	+				+1.3