Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1295

Experiment: carbon source Mucin from porcine stomach type III 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Mucin from porcine stomach type III 10 mg/ml
1,614,080	+		BT1294	0.53	-1.0
1,614,156	-		BT1294	0.58	-0.8
1,614,181	+		BT1294	0.59	+0.0
1,614,249	+		BT1294	0.63	-1.3
1,614,292	+		BT1294	0.66	-1.0
1,614,293	-		BT1294	0.66	-0.2
1,614,339	-		BT1294	0.69	-0.6
1,614,343	-		BT1294	0.69	-1.5
1,614,343	-		BT1294	0.69	+1.0
1,614,343	-		BT1294	0.69	-0.5
1,614,343	-		BT1294	0.69	-0.2
1,614,384	-		BT1294	0.72	+1.1
1,614,384	-		BT1294	0.72	-1.2
1,614,412	-		BT1294	0.73	-2.1
1,614,418	-		BT1294	0.74	-0.9
1,614,498	-		BT1294	0.78	-1.1
1,614,590	+		BT1294	0.84	-1.0
1,614,755	-				+0.4
1,614,800	-				-0.4
1,615,145	+		BT1295	0.18	-2.5
1,615,374	+		BT1295	0.68	-1.1
1,615,439	+		BT1295	0.82	-2.3
1,615,530	-				+0.4
1,615,751	-				-1.6
1,615,771	-		BT1296	0.11	-0.8
1,615,774	+		BT1296	0.11	-1.2
1,615,878	+		BT1296	0.17	-1.7
1,615,912	-		BT1296	0.19	+0.4
1,616,136	+		BT1296	0.31	-0.4
1,616,167	-		BT1296	0.33	+0.4
1,616,229	-		BT1296	0.36	-1.2
1,616,250	+		BT1296	0.37	-1.5
1,616,477	+		BT1296	0.50	-1.1