Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2131

Experiment: carbon source Mucin from porcine stomach type III 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Mucin from porcine stomach type III 10 mg/ml
2,682,083	+		BT2130	0.20	-0.3
2,682,131	-		BT2130	0.27	+0.2
2,682,253	+		BT2130	0.45	-0.3
2,682,253	+		BT2130	0.45	+0.8
2,682,254	-		BT2130	0.46	-0.3
2,682,257	+		BT2130	0.46	+0.5
2,682,257	+		BT2130	0.46	-0.7
2,682,258	-		BT2130	0.46	-3.0
2,682,308	-		BT2130	0.54	+0.9
2,682,311	-		BT2130	0.54	+0.1
2,682,450	+		BT2130	0.75	+1.0
2,682,450	+		BT2130	0.75	-0.4
2,682,500	+		BT2130	0.83	+0.1
2,682,500	+		BT2130	0.83	-0.2
2,682,531	+		BT2130	0.87	-1.0
2,682,532	-		BT2130	0.87	-0.4
2,682,532	-		BT2130	0.87	-0.6
2,682,604	+				-0.4
2,682,605	-				+0.4
2,682,676	+				+0.5
2,682,677	-				-1.1
2,682,679	+				+0.8
2,682,717	-				-0.6
2,682,724	+				-0.5
2,682,725	-				+0.2
2,682,725	-				-0.2
2,682,725	-				-0.5
2,682,727	+				+0.1
2,682,754	+				+0.2
2,682,783	+				-0.8
2,682,783	+				-0.6
2,682,784	-				-0.9
2,682,827	-				-0.6
2,682,874	+				-1.1
2,682,875	-				-0.4
2,682,875	-				+0.0
2,682,890	+				-1.1
2,682,911	-				-0.7
2,682,921	-				+0.4
2,682,990	-				+1.2
2,683,106	+		BT2131	0.17	-0.5
2,683,132	-		BT2131	0.25	-1.4
2,683,132	-		BT2131	0.25	-1.9
2,683,136	-		BT2131	0.26	+0.1
2,683,144	+		BT2131	0.28	-0.0
2,683,192	+		BT2131	0.42	+0.2
2,683,192	+		BT2131	0.42	-1.5
2,683,214	+		BT2131	0.48	+0.5
2,683,215	-		BT2131	0.48	-0.8
2,683,215	-		BT2131	0.48	+0.6
2,683,274	-		BT2131	0.65	-0.6
2,683,290	-		BT2131	0.70	-0.6
2,683,301	+		BT2131	0.73	-0.7
2,683,304	+		BT2131	0.74	-0.3
2,683,304	+		BT2131	0.74	-1.2
2,683,304	+		BT2131	0.74	-0.7
2,683,305	-		BT2131	0.74	+0.6
2,683,306	+		BT2131	0.74	+0.1
2,683,361	-		BT2131	0.90	+0.4
2,683,394	+				-0.6
2,683,500	-				+0.6
2,683,508	+				+3.4
2,683,557	-				-0.6
2,683,557	-				+0.2
2,683,622	+				-0.4
2,683,626	+				-0.0
2,683,633	+				-0.5
2,683,634	-				-0.4
2,683,653	+				-0.3
2,683,690	+				-0.9
2,683,711	+				-0.5
2,683,711	+				-0.5
2,683,712	-				+1.1
2,683,749	-				+0.2
2,683,790	-				-0.5
2,683,795	+				-0.5
2,683,795	+				-0.6
2,683,845	-				-0.2
2,683,922	-		BT2132	0.23	-0.6
2,683,963	+		BT2132	0.30	+1.1
2,683,964	-		BT2132	0.30	-0.2
2,683,966	-		BT2132	0.30	-0.5
2,683,977	+		BT2132	0.32	+0.2
2,683,985	+		BT2132	0.34	+0.6
2,683,999	+		BT2132	0.36	-0.5
2,684,068	+		BT2132	0.48	+0.3
2,684,089	-		BT2132	0.51	-0.8
2,684,115	+		BT2132	0.56	+1.0
2,684,116	-		BT2132	0.56	+0.3
2,684,145	+		BT2132	0.61	+0.1
2,684,169	+		BT2132	0.65	-0.1
2,684,169	+		BT2132	0.65	-1.0
2,684,183	-		BT2132	0.68	+0.9
2,684,206	-		BT2132	0.71	-0.8
2,684,221	-		BT2132	0.74	-0.1
2,684,245	+		BT2132	0.78	-0.1
2,684,245	+		BT2132	0.78	-0.8
2,684,245	+		BT2132	0.78	-0.0
2,684,246	-		BT2132	0.78	+0.5
2,684,247	+		BT2132	0.79	-0.6
2,684,248	-		BT2132	0.79	+0.6
2,684,248	-		BT2132	0.79	+0.1
2,684,248	-		BT2132	0.79	+1.0
2,684,335	-				-1.0
2,684,369	+				-1.7