Experiment: NoPredeControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24875 and BWI76_RS24880 are separated by 13 nucleotides BWI76_RS24880 and BWI76_RS24885 are separated by 26 nucleotides BWI76_RS24885 and BWI76_RS24890 are separated by 5 nucleotides
BWI76_RS24875: BWI76_RS24875 - tagatose-1,6-bisphosphate aldolase, at 5,184,025 to 5,185,296
_RS24875
BWI76_RS24880: BWI76_RS24880 - PTS galactitol transporter subunit IIA, at 5,185,310 to 5,185,777
_RS24880
BWI76_RS24885: BWI76_RS24885 - PTS galactitol transporter subunit IIB, at 5,185,804 to 5,186,088
_RS24885
BWI76_RS24890: BWI76_RS24890 - PTS system galactitol-specific transporter subunit IIC, at 5,186,094 to 5,187,467
_RS24890
Position (kb) 5185
5186 Strain fitness (log2 ratio) -1
0
1
2 at 5184.400 kb on + strand, within BWI76_RS24875 at 5184.410 kb on + strand, within BWI76_RS24875 at 5184.510 kb on - strand, within BWI76_RS24875 at 5184.588 kb on - strand, within BWI76_RS24875 at 5184.658 kb on + strand, within BWI76_RS24875 at 5184.708 kb on - strand, within BWI76_RS24875 at 5184.871 kb on + strand, within BWI76_RS24875 at 5184.879 kb on - strand, within BWI76_RS24875 at 5184.879 kb on - strand, within BWI76_RS24875 at 5185.029 kb on - strand, within BWI76_RS24875 at 5185.049 kb on + strand, within BWI76_RS24875 at 5185.072 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.175 kb on - strand at 5185.175 kb on - strand at 5185.175 kb on - strand at 5185.175 kb on - strand at 5185.242 kb on + strand at 5185.267 kb on + strand at 5185.437 kb on - strand, within BWI76_RS24880 at 5185.495 kb on + strand, within BWI76_RS24880 at 5185.495 kb on - strand, within BWI76_RS24880 at 5185.644 kb on - strand, within BWI76_RS24880 at 5185.837 kb on - strand, within BWI76_RS24885 at 5185.965 kb on - strand, within BWI76_RS24885 at 5185.991 kb on + strand, within BWI76_RS24885 at 5186.091 kb on + strand at 5186.200 kb on + strand at 5186.200 kb on + strand at 5186.349 kb on - strand, within BWI76_RS24890 at 5186.355 kb on + strand, within BWI76_RS24890 at 5186.496 kb on + strand, within BWI76_RS24890
Per-strain Table
Position Strand Gene LocusTag Fraction NoPredeControl remove 5,184,400 + BWI76_RS24875 0.29 -0.9 5,184,410 + BWI76_RS24875 0.30 +0.0 5,184,510 - BWI76_RS24875 0.38 -0.1 5,184,588 - BWI76_RS24875 0.44 +0.0 5,184,658 + BWI76_RS24875 0.50 +0.2 5,184,708 - BWI76_RS24875 0.54 +0.5 5,184,871 + BWI76_RS24875 0.67 -0.2 5,184,879 - BWI76_RS24875 0.67 -0.0 5,184,879 - BWI76_RS24875 0.67 -1.5 5,185,029 - BWI76_RS24875 0.79 +0.3 5,185,049 + BWI76_RS24875 0.81 -0.4 5,185,072 + BWI76_RS24875 0.82 -1.4 5,185,167 + BWI76_RS24875 0.90 -0.5 5,185,167 + BWI76_RS24875 0.90 +0.5 5,185,167 + BWI76_RS24875 0.90 +0.0 5,185,167 + BWI76_RS24875 0.90 -0.4 5,185,175 - -0.2 5,185,175 - -0.4 5,185,175 - +0.4 5,185,175 - -0.3 5,185,242 + -0.2 5,185,267 + -0.3 5,185,437 - BWI76_RS24880 0.27 -0.2 5,185,495 + BWI76_RS24880 0.40 -0.2 5,185,495 - BWI76_RS24880 0.40 +1.2 5,185,644 - BWI76_RS24880 0.71 +1.9 5,185,837 - BWI76_RS24885 0.12 -0.5 5,185,965 - BWI76_RS24885 0.56 +0.7 5,185,991 + BWI76_RS24885 0.66 +0.1 5,186,091 + +0.3 5,186,200 + -0.2 5,186,200 + +1.2 5,186,349 - BWI76_RS24890 0.19 +1.9 5,186,355 + BWI76_RS24890 0.19 +0.7 5,186,496 + BWI76_RS24890 0.29 +0.3
Or see this region's nucleotide sequence