Experiment: NoPredeControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20685 and BWI76_RS20690 are separated by 118 nucleotides BWI76_RS20690 and BWI76_RS20695 overlap by 11 nucleotides BWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotides
BWI76_RS20685: BWI76_RS20685 - cysteine synthase B, at 4,326,837 to 4,327,748
_RS20685
BWI76_RS20690: BWI76_RS20690 - sulfate ABC transporter ATP-binding protein, at 4,327,867 to 4,328,961
_RS20690
BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826
_RS20695
BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659
_RS20700
Position (kb) 4327
4328
4329 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4327.165 kb on - strand, within BWI76_RS20685 at 4327.801 kb on - strand at 4327.822 kb on - strand at 4327.979 kb on + strand, within BWI76_RS20690 at 4328.069 kb on + strand, within BWI76_RS20690 at 4328.214 kb on - strand, within BWI76_RS20690 at 4328.633 kb on + strand, within BWI76_RS20690 at 4328.766 kb on + strand, within BWI76_RS20690 at 4328.766 kb on + strand, within BWI76_RS20690 at 4328.785 kb on + strand, within BWI76_RS20690 at 4328.885 kb on - strand at 4328.914 kb on - strand at 4329.541 kb on - strand, within BWI76_RS20695 at 4329.542 kb on + strand, within BWI76_RS20695 at 4329.550 kb on - strand, within BWI76_RS20695 at 4329.748 kb on + strand at 4329.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPredeControl remove 4,327,165 - BWI76_RS20685 0.36 -0.1 4,327,801 - +1.0 4,327,822 - -0.3 4,327,979 + BWI76_RS20690 0.10 +0.0 4,328,069 + BWI76_RS20690 0.18 +2.4 4,328,214 - BWI76_RS20690 0.32 +0.8 4,328,633 + BWI76_RS20690 0.70 +0.5 4,328,766 + BWI76_RS20690 0.82 -0.3 4,328,766 + BWI76_RS20690 0.82 +3.2 4,328,785 + BWI76_RS20690 0.84 +0.9 4,328,885 - -2.6 4,328,914 - -0.1 4,329,541 - BWI76_RS20695 0.67 -0.2 4,329,542 + BWI76_RS20695 0.67 +1.2 4,329,550 - BWI76_RS20695 0.68 -0.6 4,329,748 + -0.1 4,329,874 - -0.2
Or see this region's nucleotide sequence