Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21170

Experiment: L-Carnitine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Carnitine 10 mM (C)
4,756,491	+		PFLU_RS21160	0.23	+0.6
4,756,491	+		PFLU_RS21160	0.23	-0.2
4,756,491	+		PFLU_RS21160	0.23	-1.7
4,756,491	+		PFLU_RS21160	0.23	+1.4
4,756,491	+		PFLU_RS21160	0.23	-1.3
4,756,491	+		PFLU_RS21160	0.23	-1.5
4,756,491	+		PFLU_RS21160	0.23	-1.2
4,756,491	+		PFLU_RS21160	0.23	+0.4
4,756,491	+		PFLU_RS21160	0.23	+0.2
4,756,491	+		PFLU_RS21160	0.23	+0.1
4,756,491	+		PFLU_RS21160	0.23	-0.3
4,756,491	+		PFLU_RS21160	0.23	+0.3
4,756,491	+		PFLU_RS21160	0.23	+0.2
4,756,491	+		PFLU_RS21160	0.23	+0.1
4,756,491	+		PFLU_RS21160	0.23	-0.5
4,756,491	+		PFLU_RS21160	0.23	-1.7
4,756,492	-		PFLU_RS21160	0.23	+2.1
4,756,492	-		PFLU_RS21160	0.23	-1.0
4,756,492	-		PFLU_RS21160	0.23	+0.2
4,756,492	-		PFLU_RS21160	0.23	-1.6
4,756,492	-		PFLU_RS21160	0.23	+1.2
4,756,492	-		PFLU_RS21160	0.23	+0.5
4,756,492	-		PFLU_RS21160	0.23	+1.2
4,756,492	-		PFLU_RS21160	0.23	-1.4
4,756,492	-		PFLU_RS21160	0.23	+1.0
4,756,492	-		PFLU_RS21160	0.23	+0.2
4,756,495	+		PFLU_RS21160	0.24	-1.7
4,756,495	+		PFLU_RS21160	0.24	-0.9
4,756,495	+		PFLU_RS21160	0.24	-0.9
4,756,495	+		PFLU_RS21160	0.24	-0.4
4,756,495	+		PFLU_RS21160	0.24	+1.0
4,756,496	-		PFLU_RS21160	0.24	-1.2
4,756,496	-		PFLU_RS21160	0.24	-0.8
4,756,496	-		PFLU_RS21160	0.24	-0.8
4,756,496	-		PFLU_RS21160	0.24	+0.1
4,756,496	-		PFLU_RS21160	0.24	-0.8
4,756,496	-		PFLU_RS21160	0.24	-0.1
4,756,496	-		PFLU_RS21160	0.24	-1.4
4,756,545	+		PFLU_RS21160	0.41	+0.6
4,756,545	+		PFLU_RS21160	0.41	-0.2
4,756,545	+		PFLU_RS21160	0.41	-1.2
4,756,545	+		PFLU_RS21160	0.41	-1.1
4,756,546	-		PFLU_RS21160	0.41	+0.4
4,756,639	+		PFLU_RS21160	0.73	+0.3
4,756,639	+		PFLU_RS21160	0.73	+0.5
4,756,639	+		PFLU_RS21160	0.73	+0.6
4,756,640	-		PFLU_RS21160	0.73	-0.1
4,756,640	-		PFLU_RS21160	0.73	+0.6
4,756,640	-		PFLU_RS21160	0.73	+1.5
4,756,640	-		PFLU_RS21160	0.73	+1.6
4,756,640	-		PFLU_RS21160	0.73	+1.0
4,756,640	-		PFLU_RS21160	0.73	+0.9
4,756,640	-		PFLU_RS21160	0.73	-2.4
4,756,699	+				-0.1
4,756,725	+				+0.1
4,756,725	+				-0.3
4,756,725	+				+0.5
4,756,725	+				-2.6
4,756,725	+				+0.4
4,756,725	+				-0.7
4,756,726	-				-0.4
4,756,726	-				-1.0
4,756,726	-				+0.4
4,756,726	-				-1.2
4,756,896	+		PFLU_RS21165	0.33	-0.8
4,756,896	+		PFLU_RS21165	0.33	+0.6
4,756,896	+		PFLU_RS21165	0.33	-0.6
4,756,896	+		PFLU_RS21165	0.33	+0.3
4,756,896	+		PFLU_RS21165	0.33	+1.0
4,756,896	+		PFLU_RS21165	0.33	-0.7
4,756,896	+		PFLU_RS21165	0.33	+0.6
4,756,897	-		PFLU_RS21165	0.33	+1.6
4,756,897	-		PFLU_RS21165	0.33	+0.6
4,756,897	-		PFLU_RS21165	0.33	+0.1
4,756,897	-		PFLU_RS21165	0.33	-0.7
4,756,944	+		PFLU_RS21165	0.42	+0.3
4,756,944	+		PFLU_RS21165	0.42	+0.6
4,756,945	-		PFLU_RS21165	0.43	-0.5
4,756,945	-		PFLU_RS21165	0.43	-0.7
4,756,945	-		PFLU_RS21165	0.43	+1.2
4,756,945	-		PFLU_RS21165	0.43	+1.4
4,756,945	-		PFLU_RS21165	0.43	+0.3
4,756,945	-		PFLU_RS21165	0.43	+0.2
4,756,945	-		PFLU_RS21165	0.43	-0.4
4,756,945	-		PFLU_RS21165	0.43	-1.0
4,757,019	+		PFLU_RS21165	0.57	+1.9
4,757,020	-		PFLU_RS21165	0.57	+0.2
4,757,020	-		PFLU_RS21165	0.57	-0.4
4,757,020	-		PFLU_RS21165	0.57	+0.3
4,757,100	+		PFLU_RS21165	0.72	-1.2
4,757,100	+		PFLU_RS21165	0.72	+0.8
4,757,100	+		PFLU_RS21165	0.72	+0.6
4,757,100	+		PFLU_RS21165	0.72	-0.0
4,757,100	+		PFLU_RS21165	0.72	-0.3
4,757,100	+		PFLU_RS21165	0.72	-0.9
4,757,100	+		PFLU_RS21165	0.72	-0.1
4,757,100	+		PFLU_RS21165	0.72	+0.1
4,757,100	+		PFLU_RS21165	0.72	+1.8
4,757,100	+		PFLU_RS21165	0.72	+0.8
4,757,100	+		PFLU_RS21165	0.72	-0.9
4,757,100	+		PFLU_RS21165	0.72	-1.6
4,757,100	+		PFLU_RS21165	0.72	-0.7
4,757,100	+		PFLU_RS21165	0.72	+0.5
4,757,100	+		PFLU_RS21165	0.72	-0.6
4,757,100	+		PFLU_RS21165	0.72	+0.7
4,757,100	+		PFLU_RS21165	0.72	+0.3
4,757,100	+		PFLU_RS21165	0.72	+0.2
4,757,100	+		PFLU_RS21165	0.72	-0.1
4,757,100	+		PFLU_RS21165	0.72	+0.7
4,757,100	+		PFLU_RS21165	0.72	-0.2
4,757,100	+		PFLU_RS21165	0.72	-0.2
4,757,100	+		PFLU_RS21165	0.72	+1.6
4,757,101	-		PFLU_RS21165	0.73	-1.4
4,757,101	-		PFLU_RS21165	0.73	-0.5
4,757,101	-		PFLU_RS21165	0.73	-0.4
4,757,101	-		PFLU_RS21165	0.73	-0.5
4,757,101	-		PFLU_RS21165	0.73	+3.9
4,757,101	-		PFLU_RS21165	0.73	-0.4
4,757,101	-		PFLU_RS21165	0.73	-1.6
4,757,101	-		PFLU_RS21165	0.73	+0.6
4,757,101	-		PFLU_RS21165	0.73	-0.8
4,757,101	-		PFLU_RS21165	0.73	+0.2
4,757,101	-		PFLU_RS21165	0.73	+0.4
4,757,101	-		PFLU_RS21165	0.73	+0.6
4,757,101	-		PFLU_RS21165	0.73	-0.1
4,757,101	-		PFLU_RS21165	0.73	+0.0
4,757,101	-		PFLU_RS21165	0.73	-0.4
4,757,101	-		PFLU_RS21165	0.73	+1.1
4,757,101	-		PFLU_RS21165	0.73	+0.3
4,757,101	-		PFLU_RS21165	0.73	-0.0
4,757,101	-		PFLU_RS21165	0.73	-2.6
4,757,101	-		PFLU_RS21165	0.73	-0.6
4,757,101	-		PFLU_RS21165	0.73	-0.8
4,757,101	-		PFLU_RS21165	0.73	+0.3
4,757,101	-		PFLU_RS21165	0.73	+0.2
4,757,101	-		PFLU_RS21165	0.73	-0.1
4,757,101	-		PFLU_RS21165	0.73	-0.7
4,757,101	-		PFLU_RS21165	0.73	-0.4
4,757,102	+		PFLU_RS21165	0.73	-0.6
4,757,102	+		PFLU_RS21165	0.73	+0.7
4,757,103	-		PFLU_RS21165	0.73	+0.1
4,757,103	-		PFLU_RS21165	0.73	+0.3
4,757,103	-		PFLU_RS21165	0.73	+0.6
4,757,103	-		PFLU_RS21165	0.73	-0.1
4,757,111	-		PFLU_RS21165	0.75	+1.3
4,757,137	+		PFLU_RS21165	0.80	-0.3
4,757,138	-		PFLU_RS21165	0.80	+0.3
4,757,257	+				+0.9
4,757,258	-				-1.7
4,757,258	-				-0.7
4,757,269	+				-0.4
4,757,269	+				-0.7
4,757,269	+				-1.3
4,757,269	+				+0.6
4,757,269	+				-1.1
4,757,299	-				+0.3
4,757,330	+				-0.6
4,757,330	+				+0.1
4,757,330	+				-0.3
4,757,330	+				-0.8
4,757,330	+				-1.1
4,757,331	-				-0.9
4,757,331	-				-0.6
4,757,373	-				+0.5
4,757,373	-				+0.9
4,757,401	+				+1.3
4,757,401	+				-0.6
4,757,401	+				+0.9
4,757,402	-				+1.0
4,757,402	-				-0.1
4,757,490	+				+1.4
4,757,491	-				-0.2
4,757,491	-				-2.4
4,757,491	-				+1.3
4,757,702	-		PFLU_RS21170	0.19	-0.5
4,757,887	+		PFLU_RS21170	0.33	-0.7
4,757,887	+		PFLU_RS21170	0.33	-1.5
4,757,887	+		PFLU_RS21170	0.33	+0.2
4,757,888	-		PFLU_RS21170	0.33	-2.4
4,757,888	-		PFLU_RS21170	0.33	-0.1
4,757,888	-		PFLU_RS21170	0.33	-1.1
4,757,888	-		PFLU_RS21170	0.33	-0.8
4,757,888	-		PFLU_RS21170	0.33	+0.1
4,757,963	+		PFLU_RS21170	0.38	+0.4
4,757,964	-		PFLU_RS21170	0.38	+1.2
4,757,964	-		PFLU_RS21170	0.38	+0.3
4,757,964	-		PFLU_RS21170	0.38	-0.8
4,758,058	-		PFLU_RS21170	0.45	-0.5
4,758,058	-		PFLU_RS21170	0.45	+0.1
4,758,410	+		PFLU_RS21170	0.70	+1.6
4,758,510	+		PFLU_RS21170	0.78	+0.6
4,758,510	+		PFLU_RS21170	0.78	-0.6
4,758,510	+		PFLU_RS21170	0.78	-0.7
4,758,510	+		PFLU_RS21170	0.78	-0.4
4,758,510	+		PFLU_RS21170	0.78	-0.6
4,758,510	+		PFLU_RS21170	0.78	+0.3
4,758,510	+		PFLU_RS21170	0.78	+0.6
4,758,510	+		PFLU_RS21170	0.78	+2.2
4,758,510	+		PFLU_RS21170	0.78	+0.6
4,758,510	+		PFLU_RS21170	0.78	-1.0
4,758,511	-		PFLU_RS21170	0.78	-1.3
4,758,511	-		PFLU_RS21170	0.78	-1.1
4,758,511	-		PFLU_RS21170	0.78	-0.5
4,758,511	-		PFLU_RS21170	0.78	+0.7
4,758,511	-		PFLU_RS21170	0.78	-0.3
4,758,511	-		PFLU_RS21170	0.78	-0.1
4,758,511	-		PFLU_RS21170	0.78	+0.0
4,758,569	+		PFLU_RS21170	0.82	-0.8
4,758,569	+		PFLU_RS21170	0.82	+1.5
4,758,569	+		PFLU_RS21170	0.82	+0.6
4,758,570	-		PFLU_RS21170	0.82	-0.7
4,758,570	-		PFLU_RS21170	0.82	+1.0
4,758,570	-		PFLU_RS21170	0.82	+0.6
4,758,570	-		PFLU_RS21170	0.82	+0.6
4,758,570	-		PFLU_RS21170	0.82	+0.1
4,758,570	-		PFLU_RS21170	0.82	-1.7
4,758,572	+		PFLU_RS21170	0.82	-0.6
4,758,572	+		PFLU_RS21170	0.82	+0.0
4,758,572	+		PFLU_RS21170	0.82	-0.8
4,758,572	+		PFLU_RS21170	0.82	-1.3
4,758,572	+		PFLU_RS21170	0.82	-1.2
4,758,714	+				+0.2
4,758,714	+				-1.5
4,758,759	+				+0.9
4,758,759	+				+0.9
4,758,760	-				-0.2
4,758,816	+				+0.1
4,758,821	+				-0.6
4,758,821	+				-2.0
4,758,821	+				-0.8
4,758,821	+				-0.6
4,758,822	-				+1.6
4,758,822	-				+0.0
4,758,822	-				-0.1
4,758,822	-				+0.5
4,758,898	+				-2.0
4,758,899	-				-2.2
4,758,953	+		PFLU_RS21175	0.14	+0.9
4,758,953	+		PFLU_RS21175	0.14	-0.1
4,758,953	+		PFLU_RS21175	0.14	+0.1
4,758,954	-		PFLU_RS21175	0.14	-0.6
4,758,954	-		PFLU_RS21175	0.14	+0.2
4,758,954	-		PFLU_RS21175	0.14	-0.5
4,758,954	-		PFLU_RS21175	0.14	-0.1
4,758,954	-		PFLU_RS21175	0.14	+0.1
4,758,954	-		PFLU_RS21175	0.14	+0.6
4,758,954	-		PFLU_RS21175	0.14	-0.6
4,758,954	-		PFLU_RS21175	0.14	-0.1
4,759,073	+		PFLU_RS21175	0.26	-0.9
4,759,073	+		PFLU_RS21175	0.26	-0.2
4,759,086	+		PFLU_RS21175	0.28	+1.5
4,759,086	+		PFLU_RS21175	0.28	-0.1
4,759,087	-		PFLU_RS21175	0.28	-0.4
4,759,187	+		PFLU_RS21175	0.38	+0.0
4,759,188	-		PFLU_RS21175	0.38	+0.1
4,759,250	+		PFLU_RS21175	0.45	+0.6
4,759,250	+		PFLU_RS21175	0.45	-0.1
4,759,250	+		PFLU_RS21175	0.45	-0.2
4,759,251	-		PFLU_RS21175	0.45	-2.7
4,759,251	-		PFLU_RS21175	0.45	+0.2
4,759,263	+		PFLU_RS21175	0.46	+0.1
4,759,263	+		PFLU_RS21175	0.46	-2.2
4,759,264	-		PFLU_RS21175	0.46	+0.6
4,759,288	+		PFLU_RS21175	0.49	+0.2
4,759,301	+		PFLU_RS21175	0.50	+0.4
4,759,301	+		PFLU_RS21175	0.50	-0.7
4,759,302	-		PFLU_RS21175	0.50	-0.4
4,759,505	+		PFLU_RS21175	0.72	-0.8
4,759,505	+		PFLU_RS21175	0.72	+0.7
4,759,505	+		PFLU_RS21175	0.72	-0.1
4,759,506	-		PFLU_RS21175	0.72	-1.2
4,759,506	-		PFLU_RS21175	0.72	-0.0
4,759,506	-		PFLU_RS21175	0.72	-0.5
4,759,506	-		PFLU_RS21175	0.72	-0.2
4,759,514	+		PFLU_RS21175	0.73	+0.6
4,759,514	+		PFLU_RS21175	0.73	-1.5
4,759,514	+		PFLU_RS21175	0.73	+0.3
4,759,514	+		PFLU_RS21175	0.73	+0.8
4,759,514	+		PFLU_RS21175	0.73	-1.9
4,759,514	+		PFLU_RS21175	0.73	+1.2
4,759,514	+		PFLU_RS21175	0.73	-0.2
4,759,514	+		PFLU_RS21175	0.73	-0.4
4,759,514	+		PFLU_RS21175	0.73	-0.1
4,759,514	+		PFLU_RS21175	0.73	-0.4
4,759,514	+		PFLU_RS21175	0.73	+0.7
4,759,514	+		PFLU_RS21175	0.73	+1.1
4,759,514	+		PFLU_RS21175	0.73	-0.1
4,759,514	+		PFLU_RS21175	0.73	-1.5
4,759,514	+		PFLU_RS21175	0.73	-0.6
4,759,514	+		PFLU_RS21175	0.73	+0.6
4,759,514	+		PFLU_RS21175	0.73	+0.7
4,759,514	+		PFLU_RS21175	0.73	+0.8
4,759,514	+		PFLU_RS21175	0.73	-1.7
4,759,514	+		PFLU_RS21175	0.73	-0.4
4,759,514	+		PFLU_RS21175	0.73	+1.3
4,759,514	+		PFLU_RS21175	0.73	-0.2
4,759,514	+		PFLU_RS21175	0.73	-0.5
4,759,514	+		PFLU_RS21175	0.73	+0.3
4,759,514	+		PFLU_RS21175	0.73	-0.7
4,759,514	+		PFLU_RS21175	0.73	+0.3
4,759,514	+		PFLU_RS21175	0.73	+0.2
4,759,515	-		PFLU_RS21175	0.73	+0.3
4,759,515	-		PFLU_RS21175	0.73	-1.0
4,759,515	-		PFLU_RS21175	0.73	+0.2
4,759,515	-		PFLU_RS21175	0.73	-0.2
4,759,515	-		PFLU_RS21175	0.73	+0.0
4,759,515	-		PFLU_RS21175	0.73	+1.6
4,759,515	-		PFLU_RS21175	0.73	-0.6
4,759,515	-		PFLU_RS21175	0.73	-1.4
4,759,515	-		PFLU_RS21175	0.73	-1.0
4,759,515	-		PFLU_RS21175	0.73	-0.4
4,759,515	-		PFLU_RS21175	0.73	-1.0
4,759,515	-		PFLU_RS21175	0.73	-0.5
4,759,515	-		PFLU_RS21175	0.73	+0.7
4,759,515	-		PFLU_RS21175	0.73	+0.2
4,759,515	-		PFLU_RS21175	0.73	+0.3
4,759,515	-		PFLU_RS21175	0.73	-0.3
4,759,515	-		PFLU_RS21175	0.73	-0.2
4,759,515	-		PFLU_RS21175	0.73	+0.1
4,759,515	-		PFLU_RS21175	0.73	-0.5
4,759,515	-		PFLU_RS21175	0.73	+0.1
4,759,515	-		PFLU_RS21175	0.73	+0.6
4,759,515	-		PFLU_RS21175	0.73	-0.0
4,759,515	-		PFLU_RS21175	0.73	+0.2
4,759,515	-		PFLU_RS21175	0.73	+0.4
4,759,515	-		PFLU_RS21175	0.73	+0.3
4,759,515	-		PFLU_RS21175	0.73	+1.0
4,759,515	-		PFLU_RS21175	0.73	+0.9
4,759,515	-		PFLU_RS21175	0.73	+0.4
4,759,515	-		PFLU_RS21175	0.73	-0.2
4,759,515	-		PFLU_RS21175	0.73	-1.0
4,759,610	+		PFLU_RS21175	0.83	-0.7
4,759,610	+		PFLU_RS21175	0.83	-0.4
4,759,610	+		PFLU_RS21175	0.83	+1.3
4,759,611	-		PFLU_RS21175	0.83	+0.6
4,759,611	-		PFLU_RS21175	0.83	-0.1
4,759,749	-				+0.1
4,759,815	+				+0.3