Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17770

Experiment: L-Carnitine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Carnitine 10 mM (C)
4,033,893	+		PFLU_RS17765	0.65	+0.4
4,033,894	-		PFLU_RS17765	0.66	+1.2
4,033,894	-		PFLU_RS17765	0.66	-0.4
4,033,896	+		PFLU_RS17765	0.66	-0.6
4,033,896	+		PFLU_RS17765	0.66	+0.9
4,033,896	+		PFLU_RS17765	0.66	+2.0
4,033,896	+		PFLU_RS17765	0.66	-0.5
4,033,896	+		PFLU_RS17765	0.66	-0.6
4,033,896	+		PFLU_RS17765	0.66	-0.4
4,033,897	-		PFLU_RS17765	0.66	+0.9
4,033,897	-		PFLU_RS17765	0.66	+0.8
4,033,897	-		PFLU_RS17765	0.66	-0.3
4,033,943	+		PFLU_RS17765	0.68	+0.1
4,033,997	+		PFLU_RS17765	0.71	-0.1
4,033,997	+		PFLU_RS17765	0.71	-0.7
4,033,998	-		PFLU_RS17765	0.71	-0.1
4,034,049	-		PFLU_RS17765	0.74	+1.3
4,034,055	-		PFLU_RS17765	0.74	+1.0
4,034,055	-		PFLU_RS17765	0.74	+0.9
4,034,132	+		PFLU_RS17765	0.78	-0.5
4,034,132	+		PFLU_RS17765	0.78	-0.4
4,034,208	-		PFLU_RS17765	0.82	-0.6
4,034,276	+		PFLU_RS17765	0.85	-0.5
4,034,572	+				+0.8
4,034,572	+				-1.6
4,034,572	+				-0.3
4,034,572	+				-0.8
4,034,573	-				+0.2
4,034,573	-				+0.3
4,034,573	-				+0.6
4,034,573	-				+0.5
4,034,605	+				+1.0
4,034,605	+				-1.0
4,034,605	+				+0.1
4,034,605	+				+0.1
4,034,605	+				-1.0
4,034,606	-				-1.0
4,034,606	-				-0.1
4,034,606	-				+1.3
4,034,606	-				-0.4
4,034,615	+				+0.1
4,034,615	+				-0.6
4,034,615	+				+0.4
4,034,615	+				+0.4
4,034,616	-				-1.4
4,034,616	-				-0.7
4,034,653	+				-0.4
4,034,653	+				-0.7
4,034,653	+				-0.4
4,034,653	+				-0.0
4,034,948	+		PFLU_RS17770	0.26	+1.6
4,034,948	+		PFLU_RS17770	0.26	+0.4
4,034,948	+		PFLU_RS17770	0.26	-0.2
4,034,948	+		PFLU_RS17770	0.26	+0.3
4,034,949	-		PFLU_RS17770	0.26	+0.1
4,034,949	-		PFLU_RS17770	0.26	-0.8
4,034,949	-		PFLU_RS17770	0.26	-1.2
4,034,949	-		PFLU_RS17770	0.26	-0.7
4,034,949	-		PFLU_RS17770	0.26	+0.4
4,035,044	+		PFLU_RS17770	0.34	+0.6
4,035,044	+		PFLU_RS17770	0.34	-0.7
4,035,045	-		PFLU_RS17770	0.34	+0.9
4,035,045	-		PFLU_RS17770	0.34	+0.7
4,035,045	-		PFLU_RS17770	0.34	-0.4
4,035,045	-		PFLU_RS17770	0.34	+0.6
4,035,045	-		PFLU_RS17770	0.34	-0.2
4,035,045	-		PFLU_RS17770	0.34	+0.2
4,035,045	-		PFLU_RS17770	0.34	+0.4
4,035,096	-		PFLU_RS17770	0.38	-0.4
4,035,118	+		PFLU_RS17770	0.40	+0.5
4,035,118	+		PFLU_RS17770	0.40	+0.2
4,035,118	+		PFLU_RS17770	0.40	-0.0
4,035,119	-		PFLU_RS17770	0.40	-0.2
4,035,119	-		PFLU_RS17770	0.40	-1.9
4,035,119	-		PFLU_RS17770	0.40	+0.3
4,035,119	-		PFLU_RS17770	0.40	+0.2
4,035,119	-		PFLU_RS17770	0.40	-0.4
4,035,126	+		PFLU_RS17770	0.40	+0.4
4,035,127	-		PFLU_RS17770	0.41	+0.5
4,035,170	+		PFLU_RS17770	0.44	+0.9
4,035,170	+		PFLU_RS17770	0.44	-0.8
4,035,171	-		PFLU_RS17770	0.44	-0.3
4,035,171	-		PFLU_RS17770	0.44	-0.6
4,035,203	+		PFLU_RS17770	0.47	+0.8
4,035,204	-		PFLU_RS17770	0.47	-0.3
4,035,230	+		PFLU_RS17770	0.49	+0.1
4,035,231	-		PFLU_RS17770	0.49	+2.9
4,035,231	-		PFLU_RS17770	0.49	-0.7
4,035,413	+		PFLU_RS17770	0.64	+0.6
4,035,414	-		PFLU_RS17770	0.64	+0.1
4,035,493	+		PFLU_RS17770	0.71	-1.2
4,035,548	+		PFLU_RS17770	0.75	+1.4
4,035,548	+		PFLU_RS17770	0.75	+0.6
4,035,548	+		PFLU_RS17770	0.75	+0.8
4,035,548	+		PFLU_RS17770	0.75	+1.1
4,035,548	+		PFLU_RS17770	0.75	-1.0
4,035,548	+		PFLU_RS17770	0.75	+0.4
4,035,548	+		PFLU_RS17770	0.75	+1.0
4,035,548	+		PFLU_RS17770	0.75	-0.2
4,035,548	+		PFLU_RS17770	0.75	-0.5
4,035,548	+		PFLU_RS17770	0.75	-0.6
4,035,548	+		PFLU_RS17770	0.75	+1.0
4,035,548	+		PFLU_RS17770	0.75	+0.8
4,035,548	+		PFLU_RS17770	0.75	-1.1
4,035,548	+		PFLU_RS17770	0.75	+0.6
4,035,548	+		PFLU_RS17770	0.75	+0.2
4,035,548	+		PFLU_RS17770	0.75	+0.6
4,035,548	+		PFLU_RS17770	0.75	+0.2
4,035,549	-		PFLU_RS17770	0.76	-1.0
4,035,549	-		PFLU_RS17770	0.76	+1.3
4,035,549	-		PFLU_RS17770	0.76	+0.3
4,035,549	-		PFLU_RS17770	0.76	+0.5
4,035,549	-		PFLU_RS17770	0.76	-0.2
4,035,549	-		PFLU_RS17770	0.76	-0.1
4,035,549	-		PFLU_RS17770	0.76	-0.0
4,035,549	-		PFLU_RS17770	0.76	+0.3
4,035,549	-		PFLU_RS17770	0.76	+0.2
4,035,549	-		PFLU_RS17770	0.76	-0.1
4,035,590	+		PFLU_RS17770	0.79	-0.2
4,035,590	+		PFLU_RS17770	0.79	-0.4
4,035,590	+		PFLU_RS17770	0.79	-0.2
4,035,590	+		PFLU_RS17770	0.79	+1.2
4,035,590	+		PFLU_RS17770	0.79	+2.6
4,035,590	+		PFLU_RS17770	0.79	-0.0
4,035,590	+		PFLU_RS17770	0.79	-0.2
4,035,590	+		PFLU_RS17770	0.79	-1.3
4,035,590	+		PFLU_RS17770	0.79	-0.0
4,035,590	+		PFLU_RS17770	0.79	-0.2
4,035,591	-		PFLU_RS17770	0.79	+0.6
4,035,591	-		PFLU_RS17770	0.79	-1.3
4,035,591	-		PFLU_RS17770	0.79	-0.7
4,035,591	-		PFLU_RS17770	0.79	-0.6
4,035,610	-		PFLU_RS17770	0.81	-0.2
4,035,802	+				+1.6
4,035,803	-				-0.6
4,035,803	-				+0.6
4,035,926	-				-0.2
4,035,926	-				+0.9
4,035,926	-				-0.4
4,036,098	+		PFLU_RS17775	0.14	-0.2
4,036,099	-		PFLU_RS17775	0.14	-0.1
4,036,099	-		PFLU_RS17775	0.14	+0.1
4,036,170	-		PFLU_RS17775	0.20	-1.7
4,036,449	+		PFLU_RS17775	0.46	+0.0
4,036,449	+		PFLU_RS17775	0.46	+0.6
4,036,449	+		PFLU_RS17775	0.46	-0.4
4,036,449	+		PFLU_RS17775	0.46	+0.0
4,036,450	-		PFLU_RS17775	0.46	+0.9
4,036,450	-		PFLU_RS17775	0.46	-0.2
4,036,450	-		PFLU_RS17775	0.46	-0.1
4,036,450	-		PFLU_RS17775	0.46	+0.6
4,036,704	+		PFLU_RS17775	0.69	-1.9
4,036,716	+		PFLU_RS17775	0.70	+1.6
4,036,720	+		PFLU_RS17775	0.70	-1.0
4,036,720	+		PFLU_RS17775	0.70	+1.1
4,036,720	+		PFLU_RS17775	0.70	-1.4
4,036,720	+		PFLU_RS17775	0.70	-0.3
4,036,720	+		PFLU_RS17775	0.70	+0.0
4,036,721	-		PFLU_RS17775	0.70	-0.2
4,036,721	-		PFLU_RS17775	0.70	-0.2
4,036,721	-		PFLU_RS17775	0.70	-0.1
4,036,721	-		PFLU_RS17775	0.70	+2.2
4,036,721	-		PFLU_RS17775	0.70	+0.9
4,036,721	-		PFLU_RS17775	0.70	+0.6
4,036,721	-		PFLU_RS17775	0.70	+0.9
4,036,721	-		PFLU_RS17775	0.70	-1.5
4,036,721	-		PFLU_RS17775	0.70	+1.0
4,036,721	-		PFLU_RS17775	0.70	-0.2