Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08930

Experiment: L-Carnitine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Carnitine 10 mM (C)
1,978,153	+		PFLU_RS08925	0.56	+0.7
1,978,153	+		PFLU_RS08925	0.56	+0.1
1,978,153	+		PFLU_RS08925	0.56	+0.8
1,978,153	+		PFLU_RS08925	0.56	-0.3
1,978,153	+		PFLU_RS08925	0.56	+1.2
1,978,153	+		PFLU_RS08925	0.56	-1.2
1,978,153	+		PFLU_RS08925	0.56	+0.6
1,978,153	+		PFLU_RS08925	0.56	-0.0
1,978,153	+		PFLU_RS08925	0.56	-0.4
1,978,153	+		PFLU_RS08925	0.56	+0.7
1,978,153	+		PFLU_RS08925	0.56	-0.4
1,978,153	+		PFLU_RS08925	0.56	+1.6
1,978,154	-		PFLU_RS08925	0.56	+0.6
1,978,154	-		PFLU_RS08925	0.56	-0.1
1,978,154	-		PFLU_RS08925	0.56	-2.2
1,978,154	-		PFLU_RS08925	0.56	-0.0
1,978,154	-		PFLU_RS08925	0.56	+0.1
1,978,154	-		PFLU_RS08925	0.56	-1.0
1,978,154	-		PFLU_RS08925	0.56	-1.8
1,978,154	-		PFLU_RS08925	0.56	-0.5
1,978,154	-		PFLU_RS08925	0.56	-1.6
1,978,167	+		PFLU_RS08925	0.57	+1.6
1,978,168	-		PFLU_RS08925	0.57	-0.6
1,978,168	-		PFLU_RS08925	0.57	-0.4
1,978,168	-		PFLU_RS08925	0.57	-0.5
1,978,290	+		PFLU_RS08925	0.64	+0.2
1,978,290	+		PFLU_RS08925	0.64	+1.9
1,978,291	-		PFLU_RS08925	0.64	+0.3
1,978,291	-		PFLU_RS08925	0.64	-0.7
1,978,291	-		PFLU_RS08925	0.64	+0.2
1,978,291	-		PFLU_RS08925	0.64	-0.1
1,978,291	-		PFLU_RS08925	0.64	+0.4
1,978,390	+		PFLU_RS08925	0.70	-1.0
1,978,390	+		PFLU_RS08925	0.70	+0.4
1,978,390	+		PFLU_RS08925	0.70	+1.5
1,978,391	-		PFLU_RS08925	0.70	-0.9
1,978,391	-		PFLU_RS08925	0.70	-0.5
1,978,391	-		PFLU_RS08925	0.70	-0.1
1,978,391	-		PFLU_RS08925	0.70	-0.3
1,978,391	-		PFLU_RS08925	0.70	+0.6
1,978,391	-		PFLU_RS08925	0.70	+0.6
1,978,391	-		PFLU_RS08925	0.70	+0.8
1,978,391	-		PFLU_RS08925	0.70	-0.2
1,978,557	+		PFLU_RS08925	0.80	-0.4
1,978,557	+		PFLU_RS08925	0.80	-2.7
1,978,558	-		PFLU_RS08925	0.80	-1.7
1,978,558	-		PFLU_RS08925	0.80	+1.4
1,978,558	-		PFLU_RS08925	0.80	-0.2
1,978,558	-		PFLU_RS08925	0.80	-2.2
1,978,585	+		PFLU_RS08925	0.82	-0.4
1,978,585	+		PFLU_RS08925	0.82	-0.2
1,978,585	+		PFLU_RS08925	0.82	+2.2
1,978,585	+		PFLU_RS08925	0.82	-1.0
1,978,585	+		PFLU_RS08925	0.82	-0.5
1,978,585	+		PFLU_RS08925	0.82	-0.0
1,978,585	+		PFLU_RS08925	0.82	+2.3
1,978,586	-		PFLU_RS08925	0.82	+0.6
1,978,586	-		PFLU_RS08925	0.82	-0.4
1,978,586	-		PFLU_RS08925	0.82	-0.4
1,978,586	-		PFLU_RS08925	0.82	+1.4
1,978,586	-		PFLU_RS08925	0.82	-0.0
1,978,586	-		PFLU_RS08925	0.82	-2.0
1,978,586	-		PFLU_RS08925	0.82	+0.8
1,978,661	+		PFLU_RS08925	0.87	-0.9
1,978,661	+		PFLU_RS08925	0.87	-0.4
1,978,661	+		PFLU_RS08925	0.87	+0.0
1,978,661	+		PFLU_RS08925	0.87	+0.0
1,978,662	-		PFLU_RS08925	0.87	+0.4
1,978,662	-		PFLU_RS08925	0.87	-0.9
1,978,662	-		PFLU_RS08925	0.87	+0.4
1,978,662	-		PFLU_RS08925	0.87	-1.0
1,978,662	-		PFLU_RS08925	0.87	+0.6
1,978,662	-		PFLU_RS08925	0.87	+0.4
1,978,718	-				+1.2
1,978,776	+				-0.1
1,978,776	+				+0.0
1,978,777	-				-0.4
1,978,777	-				-1.5
1,978,777	-				-1.7
1,978,819	+				-0.3
1,978,819	+				+1.4
1,978,820	-				-0.6
1,978,820	-				-1.0
1,978,872	+				+0.6
1,978,879	+				+0.1
1,978,880	-				-1.4
1,978,880	-				-1.3
1,978,880	-				-2.2
1,978,880	-				-0.0
1,978,896	-				-0.7
1,978,942	-				+0.2
1,978,953	+				-0.6
1,978,953	+				+0.5
1,978,953	+				+0.0
1,978,953	+				-0.5
1,978,954	-				-0.4
1,978,954	-				-0.1
1,978,954	-				-0.8
1,978,962	-				+1.0
1,978,962	-				-0.6
1,978,962	-				-0.0
1,979,027	+				+0.0
1,979,027	+				-1.0
1,979,027	+				+0.8
1,979,028	-				-0.7
1,979,028	-				+0.1
1,979,028	-				+0.1
1,979,028	-				-2.5
1,979,089	+				+0.6
1,979,089	+				-0.5
1,979,089	+				+0.8
1,979,089	+				-1.4
1,979,089	+				-0.9
1,979,089	+				+2.6
1,979,089	+				-1.2
1,979,089	+				-0.4
1,979,108	+				-0.6
1,979,108	+				-1.1
1,979,108	+				+1.1
1,979,108	+				+0.6
1,979,136	+				+0.5
1,979,136	+				-1.4
1,979,137	-				-0.6
1,979,151	+				-0.4
1,979,151	+				+0.0
1,979,151	+				+0.6
1,979,151	+				+1.0
1,979,151	+				+0.6
1,979,151	+				+2.4
1,979,151	+				-0.0
1,979,151	+				-1.2
1,979,151	+				+2.2
1,979,151	+				+0.6
1,979,151	+				+0.6
1,979,151	+				-1.7
1,979,151	+				+1.2
1,979,151	+				+1.2
1,979,151	+				-1.2
1,979,151	+				-0.4
1,979,151	+				+0.0
1,979,151	+				-1.0
1,979,152	-				+0.1
1,979,152	-				+0.2
1,979,152	-				+0.1
1,979,152	-				+1.1
1,979,152	-				-0.2
1,979,152	-				-0.5
1,980,450	-				-1.0
1,980,450	-				-0.5
1,980,450	-				-0.1
1,980,450	-				+1.0
1,980,450	-				+0.3
1,980,450	-				+0.3
1,980,450	-				-1.7
1,980,450	-				-0.4
1,980,450	-				+0.4
1,980,450	-				+0.9
1,980,450	-				+1.2
1,980,454	-				+0.7
1,980,454	-				-0.0
1,980,454	-				+0.8
1,980,454	-				-1.2
1,980,454	-				+0.2
1,980,454	-				-1.0
1,980,454	-				-0.8
1,980,501	-				+0.0
1,980,501	-				-0.2
1,980,502	+				-1.0
1,980,502	+				+0.0
1,980,502	+				+1.2
1,980,502	+				-1.0
1,980,502	+				+0.6
1,980,502	+				+1.2
1,980,502	+				+1.6
1,980,502	+				-0.4
1,980,502	+				-0.4
1,980,503	-				-0.4
1,980,503	-				+1.8
1,980,503	-				-1.5
1,980,503	-				-0.1
1,980,503	-				-0.1
1,980,511	-				-1.2
1,980,590	-				+0.6
1,980,590	-				-0.5
1,980,590	-				+1.8
1,980,590	-				-0.4
1,980,590	-				+0.0
1,980,599	-				-0.0
1,980,599	-				-0.5
1,980,619	+				-1.2
1,980,619	+				+0.6
1,980,619	+				-0.4
1,980,619	+				+0.6
1,980,619	+				+0.5
1,980,619	+				-0.4
1,980,619	+				-0.2
1,980,619	+				-1.2
1,980,619	+				+0.2
1,980,620	-				-3.0
1,980,620	-				+0.6
1,980,620	-				+2.2
1,980,620	-				+0.4
1,980,620	-				-0.0
1,980,622	+				+0.8
1,980,622	+				+0.1
1,980,623	-				+1.2
1,980,623	-				+1.6
1,980,735	+				-2.2
1,980,735	+				-1.5
1,980,735	+				+1.2
1,980,735	+				+1.6
1,980,735	+				+0.2