Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21710

Experiment: L-Carnitine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Carnitine 10 mM (C)
4,889,656	+		PFLU_RS21700	0.21	+1.0
4,889,657	-		PFLU_RS21700	0.22	+0.3
4,889,657	-		PFLU_RS21700	0.22	+1.3
4,889,670	+		PFLU_RS21700	0.23	+0.0
4,889,671	-		PFLU_RS21700	0.23	+1.4
4,889,691	+		PFLU_RS21700	0.26	+1.1
4,889,691	+		PFLU_RS21700	0.26	+1.2
4,890,114	+		PFLU_RS21700	0.80	+1.3
4,890,114	+		PFLU_RS21700	0.80	+1.1
4,890,114	+		PFLU_RS21700	0.80	+1.3
4,890,114	+		PFLU_RS21700	0.80	+0.7
4,890,115	-		PFLU_RS21700	0.80	+0.6
4,890,117	+		PFLU_RS21700	0.80	+0.9
4,890,117	+		PFLU_RS21700	0.80	+1.4
4,890,117	+		PFLU_RS21700	0.80	+0.2
4,890,131	+		PFLU_RS21700	0.82	+1.2
4,890,131	+		PFLU_RS21700	0.82	+1.0
4,890,131	+		PFLU_RS21700	0.82	+1.0
4,890,131	+		PFLU_RS21700	0.82	+0.6
4,890,132	-		PFLU_RS21700	0.82	+0.8
4,890,132	-		PFLU_RS21700	0.82	+2.2
4,890,132	-		PFLU_RS21700	0.82	+1.0
4,890,298	+				+0.6
4,890,298	+				+1.1
4,890,299	-				+1.0
4,890,299	-				+1.1
4,890,306	+		PFLU_RS21705	0.10	+1.5
4,890,306	+		PFLU_RS21705	0.10	+0.3
4,890,321	+		PFLU_RS21705	0.16	+1.2
4,890,321	+		PFLU_RS21705	0.16	+1.7
4,890,321	+		PFLU_RS21705	0.16	+1.2
4,890,321	+		PFLU_RS21705	0.16	+2.0
4,890,321	+		PFLU_RS21705	0.16	+1.0
4,890,321	+		PFLU_RS21705	0.16	+2.2
4,890,321	+		PFLU_RS21705	0.16	+0.6
4,890,321	+		PFLU_RS21705	0.16	+1.2
4,890,321	+		PFLU_RS21705	0.16	+1.0
4,890,321	+		PFLU_RS21705	0.16	+1.5
4,890,321	+		PFLU_RS21705	0.16	-0.1
4,890,321	+		PFLU_RS21705	0.16	+0.9
4,890,321	+		PFLU_RS21705	0.16	+1.0
4,890,322	-		PFLU_RS21705	0.16	+1.3
4,890,322	-		PFLU_RS21705	0.16	+1.1
4,890,322	-		PFLU_RS21705	0.16	+1.3
4,890,322	-		PFLU_RS21705	0.16	+1.0
4,890,322	-		PFLU_RS21705	0.16	+0.5
4,890,322	-		PFLU_RS21705	0.16	+0.9
4,890,322	-		PFLU_RS21705	0.16	+1.0
4,890,322	-		PFLU_RS21705	0.16	+0.9
4,890,322	-		PFLU_RS21705	0.16	+0.7
4,890,322	-		PFLU_RS21705	0.16	+1.5
4,890,322	-		PFLU_RS21705	0.16	+0.7
4,890,322	-		PFLU_RS21705	0.16	+0.8
4,890,553	+				+0.7
4,890,553	+				+0.5
4,890,553	+				+0.7
4,890,554	-				+0.5
4,890,554	-				+1.2
4,890,555	+				+1.7
4,890,555	+				+1.3
4,890,556	-				-0.3
4,890,556	-				+0.5
4,890,569	+				+0.7
4,890,569	+				+0.9
4,890,569	+				+0.6
4,890,569	+				+1.5
4,890,570	-				+1.1
4,890,668	+		PFLU_RS21710	0.16	+0.8
4,890,668	+		PFLU_RS21710	0.16	+0.7
4,890,668	+		PFLU_RS21710	0.16	+1.2
4,890,668	+		PFLU_RS21710	0.16	+0.9
4,890,668	+		PFLU_RS21710	0.16	+1.1
4,890,668	+		PFLU_RS21710	0.16	+0.9
4,890,669	-		PFLU_RS21710	0.16	+0.3
4,890,669	-		PFLU_RS21710	0.16	+1.6
4,890,669	-		PFLU_RS21710	0.16	+1.0
4,890,669	-		PFLU_RS21710	0.16	+0.9
4,890,722	+		PFLU_RS21710	0.23	+0.1
4,890,722	+		PFLU_RS21710	0.23	+0.4
4,890,946	+		PFLU_RS21710	0.53	+0.6
4,890,947	-		PFLU_RS21710	0.53	+0.6
4,890,947	-		PFLU_RS21710	0.53	+1.2
4,890,947	-		PFLU_RS21710	0.53	+1.4
4,890,947	-		PFLU_RS21710	0.53	+2.2
4,891,180	+		PFLU_RS21710	0.84	+0.6
4,891,181	-		PFLU_RS21710	0.85	+0.9
4,891,214	+		PFLU_RS21710	0.89	+0.5
4,891,215	-		PFLU_RS21710	0.89	+0.8
4,891,215	-		PFLU_RS21710	0.89	+0.2
4,891,215	-		PFLU_RS21710	0.89	+1.0
4,891,215	-		PFLU_RS21710	0.89	+1.1
4,891,284	+				+1.4
4,891,284	+				+1.2
4,891,285	-				+0.4
4,891,296	+				+0.4
4,891,296	+				+0.4
4,891,296	+				-0.9
4,891,296	+				+0.3
4,891,296	+				-0.2
4,891,296	+				-0.1
4,891,296	+				-0.3
4,891,296	+				+0.8
4,891,296	+				-0.3
4,891,296	+				+0.3
4,891,296	+				+0.1
4,891,296	+				-0.3
4,891,297	-				-1.3
4,891,297	-				+0.6
4,891,297	-				+0.2
4,891,297	-				+0.4
4,891,297	-				+0.5
4,891,297	-				+0.5
4,891,303	+				+1.1
4,891,303	+				+0.8
4,891,303	+				+1.5
4,891,303	+				+1.7
4,891,303	+				+1.5
4,891,304	-				+0.7
4,891,304	-				+1.2
4,891,304	-				+0.5
4,891,304	-				+1.0
4,891,706	+				-0.0
4,891,707	-				+0.0
4,891,732	+				+1.1
4,891,732	+				+0.3
4,892,103	-		PFLU_RS21720	0.79	-0.2
4,892,202	+				+1.4
4,892,202	+				+0.8
4,892,202	+				+0.8
4,892,202	+				+0.8
4,892,202	+				+0.6
4,892,202	+				+1.8
4,892,202	+				+0.9
4,892,202	+				+0.8
4,892,202	+				+0.9
4,892,202	+				+0.4
4,892,202	+				+1.2
4,892,202	+				+1.2
4,892,202	+				+0.2
4,892,202	+				-0.1
4,892,202	+				+1.0
4,892,202	+				+0.9
4,892,202	+				+0.5
4,892,202	+				+0.4
4,892,202	+				+0.5
4,892,202	+				+0.9
4,892,202	+				+0.3
4,892,202	+				-2.0
4,892,202	+				+0.1
4,892,202	+				+0.6
4,892,202	+				+0.7
4,892,202	+				+0.7
4,892,202	+				+1.7
4,892,202	+				+0.8
4,892,202	+				+1.4
4,892,202	+				+1.4
4,892,202	+				-0.0
4,892,202	+				+0.5
4,892,202	+				+0.7
4,892,202	+				+0.9
4,892,202	+				+0.4
4,892,202	+				+0.7
4,892,202	+				+1.0
4,892,202	+				+0.7
4,892,202	+				+0.7
4,892,202	+				+1.1
4,892,202	+				+1.6
4,892,202	+				+1.2
4,892,203	-				+1.6
4,892,203	-				+0.3
4,892,203	-				+0.9
4,892,203	-				+0.6
4,892,203	-				+1.0
4,892,203	-				+1.7
4,892,203	-				+0.5
4,892,203	-				+0.6
4,892,203	-				+0.8
4,892,203	-				+0.7
4,892,203	-				+0.8
4,892,203	-				+0.8
4,892,203	-				+0.4
4,892,203	-				+1.7
4,892,203	-				+0.5
4,892,203	-				+0.6
4,892,203	-				+0.4
4,892,203	-				+0.5
4,892,203	-				+1.1
4,892,203	-				+0.9
4,892,203	-				+0.8
4,892,203	-				+0.9
4,892,203	-				+1.1
4,892,203	-				+0.9
4,892,203	-				+1.2
4,892,203	-				+1.0
4,892,203	-				-0.7
4,892,203	-				+2.1
4,892,203	-				+0.1
4,892,203	-				+1.0
4,892,203	-				+1.2
4,892,203	-				+1.1
4,892,203	-				+0.7
4,892,203	-				+0.7
4,892,203	-				+1.2
4,892,203	-				+1.4
4,892,203	-				+2.1
4,892,203	-				+0.3
4,892,203	-				+1.2
4,892,203	-				+1.5
4,892,203	-				+0.6
4,892,230	+				+0.7
4,892,230	+				+0.6
4,892,230	+				+0.4
4,892,230	+				+0.2
4,892,230	+				+0.9
4,892,230	+				+1.7
4,892,230	+				+1.0
4,892,230	+				+0.7
4,892,230	+				+0.1
4,892,230	+				+1.5
4,892,230	+				+0.3
4,892,230	+				+0.7
4,892,231	-				-0.0
4,892,231	-				+0.1
4,892,231	-				-0.2
4,892,231	-				-0.1
4,892,231	-				-1.0
4,892,231	-				+0.8
4,892,231	-				+0.5
4,892,231	-				-0.4
4,892,231	-				+1.0
4,892,231	-				-2.5
4,892,231	-				-0.6
4,892,231	-				+0.8
4,892,231	-				-0.5
4,892,231	-				+1.3
4,892,231	-				-0.6
4,892,231	-				+0.1
4,892,231	-				-0.8
4,892,234	+				+0.5
4,892,234	+				+0.4
4,892,234	+				+1.0
4,892,234	+				+0.8
4,892,234	+				+1.5
4,892,234	+				+0.8
4,892,234	+				+0.6
4,892,235	-				-2.5
4,892,235	-				+0.5
4,892,235	-				-0.6
4,892,235	-				-2.6
4,892,235	-				-0.3