Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26380
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
5,459,669 | - | BWI76_RS26375 | 0.31 | +2.1 | |
5,459,786 | - | BWI76_RS26375 | 0.40 | +0.7 | |
5,459,788 | + | BWI76_RS26375 | 0.40 | -0.4 | |
5,459,835 | + | BWI76_RS26375 | 0.44 | +0.9 | |
5,460,070 | + | +0.8 | |||
5,460,104 | + | BWI76_RS26375 | 0.65 | -1.1 | |
5,460,111 | + | BWI76_RS26375 | 0.66 | +0.5 | |
5,460,177 | - | BWI76_RS26375 | 0.71 | -0.8 | |
5,460,338 | - | BWI76_RS26375 | 0.84 | -0.9 | |
5,460,390 | - | BWI76_RS26375 | 0.88 | -0.1 | |
5,460,428 | + | -0.5 | |||
5,460,451 | - | -1.8 | |||
5,460,493 | - | -0.5 | |||
5,460,527 | + | +0.0 | |||
5,460,766 | + | +0.3 | |||
5,460,954 | + | BWI76_RS26380 | 0.19 | -0.4 | |
5,461,234 | - | BWI76_RS26380 | 0.38 | -1.7 | |
5,461,245 | - | BWI76_RS26380 | 0.39 | -0.1 | |
5,461,283 | - | BWI76_RS26380 | 0.41 | -0.3 | |
5,461,500 | - | BWI76_RS26380 | 0.55 | -1.8 | |
5,461,615 | - | BWI76_RS26380 | 0.63 | -0.2 | |
5,461,639 | - | BWI76_RS26380 | 0.65 | -1.8 | |
5,461,687 | - | BWI76_RS26380 | 0.68 | -0.7 | |
5,461,819 | + | BWI76_RS26380 | 0.77 | -0.8 | |
5,462,048 | + | +0.4 | |||
5,462,128 | + | +0.2 | |||
5,462,212 | - | +0.8 | |||
5,463,135 | - | -1.4 | |||
5,463,164 | - | -1.1 |
Or see this region's nucleotide sequence