Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26315

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
5,445,726	+				-1.5
5,445,731	+				+1.4
5,445,763	+				+0.1
5,445,771	-				-1.4
5,445,790	-				+1.5
5,445,790	-				-1.0
5,445,804	+		BWI76_RS26310	0.12	-1.1
5,445,817	-		BWI76_RS26310	0.13	+0.3
5,445,851	-		BWI76_RS26310	0.18	-0.9
5,445,853	+		BWI76_RS26310	0.18	-0.3
5,445,906	+		BWI76_RS26310	0.25	-0.5
5,445,922	+		BWI76_RS26310	0.27	+0.2
5,445,922	+		BWI76_RS26310	0.27	-0.8
5,445,922	+		BWI76_RS26310	0.27	-1.5
5,445,930	-		BWI76_RS26310	0.28	+1.4
5,445,930	-		BWI76_RS26310	0.28	+0.0
5,445,930	-		BWI76_RS26310	0.28	-1.1
5,445,930	-		BWI76_RS26310	0.28	-0.7
5,445,930	-		BWI76_RS26310	0.28	-1.2
5,445,932	+		BWI76_RS26310	0.28	-0.6
5,445,932	+		BWI76_RS26310	0.28	-0.5
5,445,932	+		BWI76_RS26310	0.28	-0.5
5,445,940	-		BWI76_RS26310	0.29	+2.6
5,445,940	-		BWI76_RS26310	0.29	+0.5
5,446,037	+		BWI76_RS26310	0.42	+0.8
5,446,089	+		BWI76_RS26310	0.49	-1.7
5,446,126	+		BWI76_RS26310	0.54	-1.2
5,446,126	+		BWI76_RS26310	0.54	-1.4
5,446,131	+		BWI76_RS26310	0.54	+1.6
5,446,179	-		BWI76_RS26310	0.60	-0.2
5,446,253	-		BWI76_RS26310	0.70	+0.2
5,446,754	+				-1.3
5,446,759	+				-0.3
5,446,759	+				-0.6
5,446,759	+				-0.8
5,446,759	+				-2.1
5,446,759	+				+1.8
5,446,759	+				+0.9
5,446,759	+				-0.2
5,446,765	+				-0.6
5,446,765	+				-0.6
5,446,767	-				-0.6
5,446,767	-				-1.3
5,446,782	+				+2.5
5,446,790	-				-0.8
5,446,837	-		BWI76_RS26315	0.14	-0.4
5,446,837	-		BWI76_RS26315	0.14	-0.4
5,446,842	-		BWI76_RS26315	0.14	+0.8
5,446,842	-		BWI76_RS26315	0.14	-1.1
5,446,847	-		BWI76_RS26315	0.15	-0.5
5,446,917	+		BWI76_RS26315	0.23	-0.5
5,446,927	-		BWI76_RS26315	0.24	+2.3
5,446,962	+		BWI76_RS26315	0.28	-0.1
5,446,969	+		BWI76_RS26315	0.29	+0.5
5,446,980	-		BWI76_RS26315	0.30	-1.4
5,446,982	+		BWI76_RS26315	0.30	+1.2
5,446,988	-		BWI76_RS26315	0.31	-0.4
5,446,988	-		BWI76_RS26315	0.31	+0.3
5,446,989	+		BWI76_RS26315	0.31	+1.8
5,446,993	-		BWI76_RS26315	0.31	+2.0
5,446,993	-		BWI76_RS26315	0.31	+0.2
5,447,050	-				-0.5
5,447,058	-		BWI76_RS26315	0.38	-0.6
5,447,130	+		BWI76_RS26315	0.46	+0.2
5,447,134	+		BWI76_RS26315	0.47	-1.1
5,447,151	+		BWI76_RS26315	0.49	-1.2
5,447,151	+		BWI76_RS26315	0.49	+0.2
5,447,159	-		BWI76_RS26315	0.50	-0.1
5,447,159	-		BWI76_RS26315	0.50	-0.4
5,447,159	-		BWI76_RS26315	0.50	-0.3
5,447,159	-		BWI76_RS26315	0.50	-0.2
5,447,159	-		BWI76_RS26315	0.50	-0.9
5,447,159	-		BWI76_RS26315	0.50	+1.1
5,447,159	-		BWI76_RS26315	0.50	-0.3
5,447,161	+		BWI76_RS26315	0.50	+0.1
5,447,186	-		BWI76_RS26315	0.53	-0.5
5,447,195	-		BWI76_RS26315	0.54	+0.3
5,447,205	-		BWI76_RS26315	0.55	-1.5
5,447,239	+		BWI76_RS26315	0.59	-1.2
5,447,244	+		BWI76_RS26315	0.59	-0.9
5,447,247	-		BWI76_RS26315	0.59	+0.8
5,447,284	+		BWI76_RS26315	0.64	+1.5
5,447,292	-				+3.4
5,447,316	-		BWI76_RS26315	0.67	+0.4
5,447,321	-		BWI76_RS26315	0.68	-0.9
5,447,354	+		BWI76_RS26315	0.71	-1.1
5,447,354	+		BWI76_RS26315	0.71	+0.6
5,447,362	-		BWI76_RS26315	0.72	+1.2
5,447,370	+		BWI76_RS26315	0.73	+0.2
5,447,487	+		BWI76_RS26315	0.86	-2.3
5,447,502	+		BWI76_RS26315	0.88	-0.8
5,447,502	+		BWI76_RS26315	0.88	+0.4
5,447,502	+		BWI76_RS26315	0.88	+1.5
5,447,511	+		BWI76_RS26315	0.89	-0.8
5,447,531	+				+1.6
5,447,532	+				-1.0
5,447,547	+				+2.9
5,447,547	+				-1.4
5,447,551	-				+0.2
5,447,551	-				-0.4
5,447,551	-				-0.5
5,447,555	-				-0.5
5,447,555	-				-0.2
5,447,555	-				-1.2
5,447,562	+				-0.8
5,447,612	+				-0.4
5,447,617	+				+1.0
5,447,637	+				-1.5
5,447,638	-				-1.1
5,447,645	+				+0.9
5,447,646	-				+1.0
5,447,653	-				-0.9
5,447,653	-				-0.1
5,447,662	+				-0.8
5,447,702	-				-0.2
5,447,732	+				-0.5
5,447,757	-				-1.1
5,447,757	-				-0.4
5,447,776	+		BWI76_RS26320	0.11	-0.8
5,447,781	+		BWI76_RS26320	0.12	+1.8
5,447,784	-		BWI76_RS26320	0.12	-0.8
5,447,784	-		BWI76_RS26320	0.12	-1.1
5,447,789	-		BWI76_RS26320	0.12	+0.4
5,447,789	-		BWI76_RS26320	0.12	+0.1
5,447,796	+		BWI76_RS26320	0.13	-3.4
5,447,799	-		BWI76_RS26320	0.13	-1.1
5,447,835	+		BWI76_RS26320	0.16	-0.2
5,447,843	-		BWI76_RS26320	0.16	+0.7
5,447,845	+		BWI76_RS26320	0.16	-0.5
5,447,870	-		BWI76_RS26320	0.18	-0.1
5,447,914	+		BWI76_RS26320	0.22	+0.0
5,447,914	+		BWI76_RS26320	0.22	-0.8
5,447,922	-		BWI76_RS26320	0.22	-0.8
5,447,928	+		BWI76_RS26320	0.23	-0.8
5,447,936	-		BWI76_RS26320	0.23	+0.8
5,447,941	-		BWI76_RS26320	0.24	-1.4
5,447,941	-		BWI76_RS26320	0.24	-0.7
5,448,098	-		BWI76_RS26320	0.36	+2.8
5,448,098	-		BWI76_RS26320	0.36	+0.1
5,448,337	+		BWI76_RS26320	0.54	-0.1
5,448,345	-		BWI76_RS26320	0.55	+0.2
5,448,382	+		BWI76_RS26320	0.57	-0.4
5,448,395	+		BWI76_RS26320	0.58	-0.1
5,448,395	+		BWI76_RS26320	0.58	-0.4
5,448,468	+		BWI76_RS26320	0.64	-0.0