Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23730
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
4,953,148 | + | BWI76_RS23725 | 0.33 | +1.7 | |
4,953,377 | + | BWI76_RS23725 | 0.50 | -2.0 | |
4,953,536 | - | BWI76_RS23725 | 0.62 | +0.6 | |
4,953,615 | + | BWI76_RS23725 | 0.67 | +0.0 | |
4,953,625 | - | BWI76_RS23725 | 0.68 | -0.5 | |
4,953,625 | - | BWI76_RS23725 | 0.68 | +1.0 | |
4,953,694 | + | BWI76_RS23725 | 0.73 | -0.3 | |
4,953,715 | + | BWI76_RS23725 | 0.75 | +1.5 | |
4,953,718 | - | BWI76_RS23725 | 0.75 | +0.0 | |
4,953,796 | + | BWI76_RS23725 | 0.81 | -0.1 | |
4,953,914 | + | BWI76_RS23725 | 0.90 | -0.3 | |
4,953,922 | - | -0.3 | |||
4,954,401 | + | BWI76_RS23730 | 0.29 | +0.2 | |
4,954,409 | - | BWI76_RS23730 | 0.29 | -0.7 | |
4,954,420 | + | BWI76_RS23730 | 0.30 | -0.9 | |
4,954,568 | + | BWI76_RS23730 | 0.43 | -1.3 | |
4,954,568 | + | BWI76_RS23730 | 0.43 | -0.2 | |
4,954,669 | + | BWI76_RS23730 | 0.51 | -0.7 | |
4,954,677 | - | BWI76_RS23730 | 0.52 | +0.2 | |
4,954,677 | - | BWI76_RS23730 | 0.52 | -0.3 | |
4,954,839 | - | BWI76_RS23730 | 0.66 | -0.8 | |
4,954,900 | + | BWI76_RS23730 | 0.71 | +0.2 | |
4,955,375 | - | BWI76_RS23735 | 0.12 | +0.2 | |
4,955,987 | - | BWI76_RS23735 | 0.65 | -1.0 | |
4,956,149 | - | BWI76_RS23735 | 0.79 | -1.2 | |
4,956,233 | - | BWI76_RS23735 | 0.86 | +1.6 |
Or see this region's nucleotide sequence