Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23715
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
4,949,429 | - | BWI76_RS23710 | 0.32 | +0.1 | |
4,949,480 | + | BWI76_RS23710 | 0.36 | +0.0 | |
4,949,754 | - | BWI76_RS23710 | 0.59 | -0.2 | |
4,949,876 | + | BWI76_RS23710 | 0.70 | +0.6 | |
4,950,029 | + | BWI76_RS23710 | 0.82 | +0.5 | |
4,950,593 | + | BWI76_RS23715 | 0.16 | +1.4 | |
4,950,593 | + | BWI76_RS23715 | 0.16 | -0.8 | |
4,950,601 | - | BWI76_RS23715 | 0.17 | +0.2 | |
4,950,601 | - | BWI76_RS23715 | 0.17 | -0.0 | |
4,950,640 | + | BWI76_RS23715 | 0.20 | +0.1 | |
4,950,640 | + | BWI76_RS23715 | 0.20 | +1.8 | |
4,950,645 | + | BWI76_RS23715 | 0.20 | +1.3 | |
4,951,044 | - | BWI76_RS23715 | 0.50 | +0.3 | |
4,951,165 | - | BWI76_RS23715 | 0.59 | +0.1 | |
4,951,334 | - | BWI76_RS23715 | 0.72 | -0.5 | |
4,951,437 | - | BWI76_RS23715 | 0.79 | +1.9 | |
4,951,665 | + | +0.5 | |||
4,951,937 | + | BWI76_RS23720 | 0.24 | -0.0 | |
4,951,963 | - | BWI76_RS23720 | 0.27 | -1.4 | |
4,951,991 | - | BWI76_RS23720 | 0.30 | +1.6 | |
4,952,238 | + | BWI76_RS23720 | 0.58 | +1.2 | |
4,952,333 | - | BWI76_RS23720 | 0.69 | -0.4 | |
4,952,368 | - | BWI76_RS23720 | 0.73 | +0.7 | |
4,952,488 | - | BWI76_RS23720 | 0.87 | -0.0 | |
4,952,711 | - | -0.4 |
Or see this region's nucleotide sequence