Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22450
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
4,679,211 | + | BWI76_RS22440 | 0.56 | -1.1 | |
4,679,272 | + | BWI76_RS22440 | 0.63 | +0.4 | |
4,679,366 | - | BWI76_RS22440 | 0.74 | +0.4 | |
4,679,425 | - | BWI76_RS22440 | 0.81 | -0.5 | |
4,679,489 | + | BWI76_RS22440 | 0.88 | +0.6 | |
4,679,642 | - | -0.1 | |||
4,679,680 | - | -1.8 | |||
4,680,060 | - | +1.2 | |||
4,680,111 | - | -0.1 | |||
4,680,206 | - | BWI76_RS22450 | 0.26 | -1.0 | |
4,680,382 | + | BWI76_RS22450 | 0.88 | -2.3 | |
4,680,572 | - | -0.3 | |||
4,680,580 | - | -1.1 | |||
4,680,580 | - | -0.2 | |||
4,680,582 | - | +0.7 | |||
4,680,582 | - | +1.0 | |||
4,680,632 | + | -0.7 | |||
4,680,642 | - | -0.6 | |||
4,680,642 | - | -0.1 | |||
4,680,725 | + | +0.7 | |||
4,680,771 | + | +0.2 | |||
4,680,881 | + | BWI76_RS22455 | 0.11 | -0.3 | |
4,681,226 | - | BWI76_RS22455 | 0.25 | +3.2 |
Or see this region's nucleotide sequence