Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17275

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,579,564	+				+0.7
3,579,661	-				-0.0
3,579,661	-				-1.0
3,579,661	-				-2.5
3,579,704	+				-0.5
3,579,708	-				+0.9
3,579,712	-				+0.6
3,579,731	-				+0.3
3,579,795	+				-1.5
3,579,816	-				+0.3
3,579,816	-				-0.2
3,579,847	-				+0.2
3,579,859	+				-0.6
3,579,908	-				-0.7
3,579,931	-				+1.8
3,579,992	+		BWI76_RS17275	0.15	+0.1
3,579,992	+		BWI76_RS17275	0.15	-0.8
3,580,000	-				+1.0
3,580,000	-		BWI76_RS17275	0.15	-0.9
3,580,000	-		BWI76_RS17275	0.15	+1.3
3,580,022	-		BWI76_RS17275	0.18	+0.4
3,580,061	-		BWI76_RS17275	0.21	+1.5
3,580,088	+		BWI76_RS17275	0.24	+0.4
3,580,096	-		BWI76_RS17275	0.25	-1.5
3,580,117	-		BWI76_RS17275	0.27	+0.5
3,580,140	-		BWI76_RS17275	0.29	-2.3
3,580,142	+		BWI76_RS17275	0.29	-1.1
3,580,142	+		BWI76_RS17275	0.29	+0.8
3,580,150	-		BWI76_RS17275	0.30	+0.2
3,580,150	-		BWI76_RS17275	0.30	+0.9
3,580,150	-		BWI76_RS17275	0.30	+0.5
3,580,150	-		BWI76_RS17275	0.30	-0.2
3,580,184	+		BWI76_RS17275	0.34	+1.5
3,580,184	+		BWI76_RS17275	0.34	-0.0
3,580,184	+		BWI76_RS17275	0.34	+0.0
3,580,184	+		BWI76_RS17275	0.34	-1.0
3,580,192	-		BWI76_RS17275	0.34	-0.8
3,580,192	-		BWI76_RS17275	0.34	+0.3
3,580,192	-		BWI76_RS17275	0.34	+0.1
3,580,219	-		BWI76_RS17275	0.37	-0.3
3,580,299	-		BWI76_RS17275	0.45	-1.2
3,580,301	+		BWI76_RS17275	0.45	-1.2
3,580,373	+		BWI76_RS17275	0.52	-0.9
3,580,383	+		BWI76_RS17275	0.53	+1.8
3,580,400	-		BWI76_RS17275	0.55	+0.7
3,580,400	-		BWI76_RS17275	0.55	+1.2
3,580,569	+		BWI76_RS17275	0.71	+0.0
3,580,786	+				-0.2
3,580,794	-				+1.6
3,580,794	-				-1.6
3,580,868	-				-0.1
3,580,868	-				+0.6
3,580,898	+				+1.4
3,580,904	+				-2.2
3,580,949	+				+1.1
3,580,949	+				+0.6
3,580,957	-				+0.8
3,580,977	-				+0.3
3,581,020	+				-0.3
3,581,114	-		BWI76_RS17280	0.19	-2.7
3,581,423	+		BWI76_RS17280	0.53	-0.4
3,581,423	+		BWI76_RS17280	0.53	-0.6
3,581,581	-		BWI76_RS17280	0.70	-1.8