Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14670
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
3,080,110 | + | -0.5 | |||
3,080,115 | + | +0.8 | |||
3,080,123 | - | -1.3 | |||
3,080,166 | - | -0.2 | |||
3,080,290 | - | -0.1 | |||
3,080,454 | - | +0.2 | |||
3,080,462 | - | -0.3 | |||
3,080,482 | - | +1.2 | |||
3,080,482 | - | +1.1 | |||
3,080,649 | - | BWI76_RS14665 | 0.16 | +0.2 | |
3,080,805 | + | BWI76_RS14665 | 0.46 | -0.3 | |
3,080,899 | - | BWI76_RS14665 | 0.65 | -0.2 | |
3,081,057 | - | +0.5 | |||
3,081,158 | - | BWI76_RS14670 | 0.11 | -0.9 | |
3,081,205 | + | BWI76_RS14670 | 0.19 | +2.6 | |
3,081,736 | - | BWI76_RS14675 | 0.16 | -0.1 | |
3,081,752 | - | BWI76_RS14675 | 0.19 | -0.2 | |
3,081,752 | - | BWI76_RS14675 | 0.19 | +0.4 | |
3,081,865 | + | BWI76_RS14675 | 0.34 | +0.1 | |
3,081,935 | + | -0.3 | |||
3,082,639 | - | BWI76_RS14680 | 0.50 | -0.7 |
Or see this region's nucleotide sequence