Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14385

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,004,475	-		BWI76_RS14380	0.59	+1.5
3,004,537	+		BWI76_RS14380	0.61	-1.0
3,004,552	-		BWI76_RS14380	0.62	+0.7
3,004,552	-		BWI76_RS14380	0.62	-0.9
3,004,552	-		BWI76_RS14380	0.62	-0.6
3,004,851	-		BWI76_RS14380	0.74	+1.7
3,004,851	-		BWI76_RS14380	0.74	-0.0
3,004,908	-				-1.1
3,004,952	+				+0.2
3,005,041	+				-0.7
3,005,049	-		BWI76_RS14380	0.83	-0.7
3,005,049	-		BWI76_RS14380	0.83	-0.6
3,005,153	-		BWI76_RS14380	0.87	+1.3
3,005,208	+		BWI76_RS14380	0.89	-1.6
3,005,211	-		BWI76_RS14380	0.90	-1.6
3,005,248	+				+0.1
3,005,362	+				+1.6
3,005,362	+				+0.5
3,005,370	-				-0.1
3,005,557	+				-0.9
3,005,565	-				+0.9
3,005,609	+		BWI76_RS14385	0.10	+2.3
3,005,609	+		BWI76_RS14385	0.10	-1.1
3,005,617	-				+0.2
3,005,627	-		BWI76_RS14385	0.11	+0.1
3,005,646	+		BWI76_RS14385	0.12	-0.8
3,005,819	-		BWI76_RS14385	0.24	+2.1
3,005,998	+		BWI76_RS14385	0.35	+0.5
3,006,006	-		BWI76_RS14385	0.36	-0.8
3,006,146	-		BWI76_RS14385	0.45	+4.6
3,006,164	+				+0.2
3,006,242	+		BWI76_RS14385	0.51	-1.9
3,006,350	-		BWI76_RS14385	0.58	+0.6
3,006,356	-		BWI76_RS14385	0.58	-2.1
3,006,366	-		BWI76_RS14385	0.59	-1.0
3,006,403	-		BWI76_RS14385	0.61	+0.5
3,006,480	-		BWI76_RS14385	0.66	+0.6
3,006,571	+		BWI76_RS14385	0.72	+3.2
3,006,658	+		BWI76_RS14385	0.78	+0.4
3,006,792	+		BWI76_RS14385	0.86	-1.4
3,006,799	-		BWI76_RS14385	0.87	+2.3
3,007,025	+				+0.3
3,007,224	-				+0.5
3,007,224	-		BWI76_RS14390	0.27	-1.8
3,007,224	-		BWI76_RS14390	0.27	-0.3
3,007,860	+				+0.5