Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06165
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
1,294,608 | + | BWI76_RS06160 | 0.37 | +0.8 | |
1,294,808 | + | BWI76_RS06160 | 0.51 | +0.4 | |
1,294,816 | - | BWI76_RS06160 | 0.52 | -1.8 | |
1,294,897 | - | BWI76_RS06160 | 0.57 | -0.9 | |
1,294,908 | + | BWI76_RS06160 | 0.58 | -1.0 | |
1,294,916 | - | BWI76_RS06160 | 0.59 | +2.1 | |
1,294,953 | + | BWI76_RS06160 | 0.61 | -0.2 | |
1,294,964 | + | BWI76_RS06160 | 0.62 | -2.4 | |
1,294,972 | - | BWI76_RS06160 | 0.63 | -1.2 | |
1,295,017 | - | BWI76_RS06160 | 0.66 | -1.1 | |
1,295,210 | + | BWI76_RS06160 | 0.79 | +1.5 | |
1,295,242 | - | BWI76_RS06160 | 0.82 | -0.2 | |
1,295,312 | + | BWI76_RS06160 | 0.86 | +0.2 | |
1,295,464 | + | -0.5 | |||
1,295,477 | - | -0.0 | |||
1,295,477 | - | +0.2 | |||
1,295,562 | + | +1.3 | |||
1,295,570 | - | -1.2 | |||
1,295,594 | - | -1.4 | |||
1,295,675 | + | BWI76_RS06165 | 0.25 | -0.0 | |
1,295,727 | + | BWI76_RS06165 | 0.41 | +1.6 | |
1,295,775 | + | BWI76_RS06165 | 0.56 | +1.5 | |
1,295,827 | + | BWI76_RS06165 | 0.72 | -0.4 | |
1,295,848 | + | BWI76_RS06165 | 0.79 | +0.5 |
Or see this region's nucleotide sequence