Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25195

Experiment: Dictyostellum sp.mixed culture-2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25190 and BWI76_RS25195 are separated by 198 nucleotidesBWI76_RS25195 and BWI76_RS25200 are separated by 56 nucleotides BWI76_RS25190: BWI76_RS25190 - octaprenyl-diphosphate synthase, at 5,240,907 to 5,241,878 _RS25190 BWI76_RS25195: BWI76_RS25195 - maltose metabolism regulator, at 5,242,077 to 5,242,349 _RS25195 BWI76_RS25200: BWI76_RS25200 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 5,242,406 to 5,243,665 _RS25200 Position (kb) 5242 5243Strain fitness (log2 ratio) -1 0 1at 5241.881 kb on - strandat 5242.065 kb on - strandat 5242.205 kb on + strand, within BWI76_RS25195at 5242.213 kb on - strand, within BWI76_RS25195at 5242.354 kb on + strandat 5242.371 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2
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5,241,881 - -0.0
5,242,065 - +1.0
5,242,205 + BWI76_RS25195 0.47 +0.2
5,242,213 - BWI76_RS25195 0.50 +1.6
5,242,354 + +0.5
5,242,371 + -0.6

Or see this region's nucleotide sequence