Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19035 and BWI76_RS19040 are separated by 23 nucleotides BWI76_RS19040 and BWI76_RS19045 are separated by 37 nucleotides
BWI76_RS19035: BWI76_RS19035 - dTDP-rhamnosyl transferase, at 3,953,306 to 3,954,193
_RS19035
BWI76_RS19040: BWI76_RS19040 - hypothetical protein, at 3,954,217 to 3,955,347
_RS19040
BWI76_RS19045: BWI76_RS19045 - capsular polysaccharide biosynthesis protein, at 3,955,385 to 3,956,353
_RS19045
Position (kb)
3954
3955
3956 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3953.512 kb on - strand, within BWI76_RS19035 at 3953.512 kb on - strand, within BWI76_RS19035 at 3953.524 kb on - strand, within BWI76_RS19035 at 3953.539 kb on - strand, within BWI76_RS19035 at 3953.578 kb on - strand, within BWI76_RS19035 at 3953.578 kb on - strand, within BWI76_RS19035 at 3953.578 kb on - strand, within BWI76_RS19035 at 3953.578 kb on - strand, within BWI76_RS19035 at 3953.578 kb on - strand, within BWI76_RS19035 at 3953.578 kb on - strand, within BWI76_RS19035 at 3953.580 kb on - strand, within BWI76_RS19035 at 3953.635 kb on - strand, within BWI76_RS19035 at 3953.638 kb on - strand, within BWI76_RS19035 at 3953.638 kb on - strand, within BWI76_RS19035 at 3953.638 kb on - strand, within BWI76_RS19035 at 3953.645 kb on - strand, within BWI76_RS19035 at 3953.683 kb on - strand, within BWI76_RS19035 at 3953.692 kb on - strand, within BWI76_RS19035 at 3953.709 kb on - strand, within BWI76_RS19035 at 3953.823 kb on - strand, within BWI76_RS19035 at 3953.851 kb on - strand, within BWI76_RS19035 at 3953.859 kb on - strand, within BWI76_RS19035 at 3954.059 kb on - strand, within BWI76_RS19035 at 3954.125 kb on - strand at 3954.253 kb on - strand at 3954.358 kb on - strand, within BWI76_RS19040 at 3954.461 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.496 kb on - strand, within BWI76_RS19040 at 3954.506 kb on - strand, within BWI76_RS19040 at 3954.506 kb on - strand, within BWI76_RS19040 at 3954.714 kb on - strand, within BWI76_RS19040 at 3954.782 kb on - strand, within BWI76_RS19040 at 3955.187 kb on - strand, within BWI76_RS19040 at 3955.673 kb on - strand, within BWI76_RS19045 at 3955.800 kb on - strand, within BWI76_RS19045 at 3955.800 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.810 kb on - strand, within BWI76_RS19045 at 3955.948 kb on - strand, within BWI76_RS19045 at 3955.967 kb on - strand, within BWI76_RS19045 at 3956.156 kb on - strand, within BWI76_RS19045 at 3956.169 kb on - strand, within BWI76_RS19045 at 3956.169 kb on - strand, within BWI76_RS19045 at 3956.286 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2 remove 3,953,512 - BWI76_RS19035 0.23 -0.7 3,953,512 - BWI76_RS19035 0.23 -0.1 3,953,524 - BWI76_RS19035 0.25 -2.5 3,953,539 - BWI76_RS19035 0.26 -0.1 3,953,578 - BWI76_RS19035 0.31 -1.8 3,953,578 - BWI76_RS19035 0.31 +0.9 3,953,578 - BWI76_RS19035 0.31 -1.7 3,953,578 - BWI76_RS19035 0.31 -1.4 3,953,578 - BWI76_RS19035 0.31 -1.6 3,953,578 - BWI76_RS19035 0.31 -0.9 3,953,580 - BWI76_RS19035 0.31 -0.7 3,953,635 - BWI76_RS19035 0.37 -1.7 3,953,638 - BWI76_RS19035 0.37 +1.9 3,953,638 - BWI76_RS19035 0.37 -0.4 3,953,638 - BWI76_RS19035 0.37 +1.9 3,953,645 - BWI76_RS19035 0.38 -0.9 3,953,683 - BWI76_RS19035 0.42 -1.3 3,953,692 - BWI76_RS19035 0.43 +1.9 3,953,709 - BWI76_RS19035 0.45 -0.4 3,953,823 - BWI76_RS19035 0.58 +0.3 3,953,851 - BWI76_RS19035 0.61 -0.1 3,953,859 - BWI76_RS19035 0.62 -0.9 3,954,059 - BWI76_RS19035 0.85 -1.4 3,954,125 - -1.8 3,954,253 - -0.8 3,954,358 - BWI76_RS19040 0.12 -1.6 3,954,461 - BWI76_RS19040 0.22 -3.7 3,954,496 - BWI76_RS19040 0.25 -1.2 3,954,496 - BWI76_RS19040 0.25 -0.4 3,954,496 - BWI76_RS19040 0.25 -2.6 3,954,506 - BWI76_RS19040 0.26 +1.9 3,954,506 - BWI76_RS19040 0.26 -2.6 3,954,714 - BWI76_RS19040 0.44 -0.8 3,954,782 - BWI76_RS19040 0.50 -2.1 3,955,187 - BWI76_RS19040 0.86 -0.9 3,955,673 - BWI76_RS19045 0.30 -0.1 3,955,800 - BWI76_RS19045 0.43 +0.6 3,955,800 - BWI76_RS19045 0.43 -0.7 3,955,810 - BWI76_RS19045 0.44 +0.4 3,955,810 - BWI76_RS19045 0.44 +0.2 3,955,810 - BWI76_RS19045 0.44 +0.1 3,955,948 - BWI76_RS19045 0.58 -0.5 3,955,967 - BWI76_RS19045 0.60 +0.8 3,956,156 - BWI76_RS19045 0.80 -0.5 3,956,169 - BWI76_RS19045 0.81 -0.3 3,956,169 - BWI76_RS19045 0.81 -0.5 3,956,286 - -0.3
Or see this region's nucleotide sequence