Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13660 and BWI76_RS13665 overlap by 4 nucleotides BWI76_RS13665 and BWI76_RS13670 are separated by 97 nucleotides
BWI76_RS13660: BWI76_RS13660 - nitrate reductase subunit beta, at 2,846,829 to 2,848,373
_RS13660
BWI76_RS13665: BWI76_RS13665 - nitrate reductase subunit alpha, at 2,848,370 to 2,852,110
_RS13665
BWI76_RS13670: BWI76_RS13670 - NarK family nitrate/nitrite MFS transporter, at 2,852,208 to 2,853,596
_RS13670
Position (kb)
2848
2849
2850
2851
2852
2853 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2847.946 kb on - strand, within BWI76_RS13660 at 2848.318 kb on - strand at 2848.556 kb on + strand at 2849.102 kb on - strand, within BWI76_RS13665 at 2849.318 kb on + strand, within BWI76_RS13665 at 2849.786 kb on - strand, within BWI76_RS13665 at 2849.891 kb on + strand, within BWI76_RS13665 at 2850.103 kb on - strand, within BWI76_RS13665 at 2850.442 kb on + strand, within BWI76_RS13665 at 2850.452 kb on + strand, within BWI76_RS13665 at 2850.452 kb on + strand, within BWI76_RS13665 at 2850.765 kb on - strand, within BWI76_RS13665 at 2851.241 kb on - strand, within BWI76_RS13665 at 2851.581 kb on + strand, within BWI76_RS13665 at 2851.730 kb on + strand, within BWI76_RS13665 at 2851.812 kb on - strand at 2851.866 kb on - strand at 2852.101 kb on - strand at 2852.266 kb on + strand at 2852.580 kb on - strand, within BWI76_RS13670 at 2852.709 kb on - strand, within BWI76_RS13670 at 2852.887 kb on - strand, within BWI76_RS13670 at 2852.909 kb on + strand, within BWI76_RS13670 at 2853.073 kb on - strand, within BWI76_RS13670 at 2853.099 kb on + strand, within BWI76_RS13670 at 2853.099 kb on + strand, within BWI76_RS13670 at 2853.099 kb on + strand, within BWI76_RS13670 at 2853.104 kb on + strand, within BWI76_RS13670 at 2853.106 kb on + strand, within BWI76_RS13670 at 2853.107 kb on - strand, within BWI76_RS13670
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2 remove 2,847,946 - BWI76_RS13660 0.72 +1.1 2,848,318 - -0.1 2,848,556 + -2.2 2,849,102 - BWI76_RS13665 0.20 -1.3 2,849,318 + BWI76_RS13665 0.25 +0.1 2,849,786 - BWI76_RS13665 0.38 +0.6 2,849,891 + BWI76_RS13665 0.41 -1.7 2,850,103 - BWI76_RS13665 0.46 +0.9 2,850,442 + BWI76_RS13665 0.55 +2.5 2,850,452 + BWI76_RS13665 0.56 +0.4 2,850,452 + BWI76_RS13665 0.56 +0.1 2,850,765 - BWI76_RS13665 0.64 +1.6 2,851,241 - BWI76_RS13665 0.77 -0.3 2,851,581 + BWI76_RS13665 0.86 +2.7 2,851,730 + BWI76_RS13665 0.90 +0.1 2,851,812 - +0.0 2,851,866 - -0.4 2,852,101 - -0.1 2,852,266 + -0.6 2,852,580 - BWI76_RS13670 0.27 -1.3 2,852,709 - BWI76_RS13670 0.36 -0.7 2,852,887 - BWI76_RS13670 0.49 -0.1 2,852,909 + BWI76_RS13670 0.50 -1.2 2,853,073 - BWI76_RS13670 0.62 +0.1 2,853,099 + BWI76_RS13670 0.64 +0.6 2,853,099 + BWI76_RS13670 0.64 +0.4 2,853,099 + BWI76_RS13670 0.64 -0.5 2,853,104 + BWI76_RS13670 0.65 +0.8 2,853,106 + BWI76_RS13670 0.65 +0.2 2,853,107 - BWI76_RS13670 0.65 -0.3
Or see this region's nucleotide sequence