Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06410

Experiment: Dictyostellum sp.mixed culture-2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06405 and BWI76_RS06410 are separated by 142 nucleotidesBWI76_RS06410 and BWI76_RS06415 are separated by 114 nucleotides BWI76_RS06405: BWI76_RS06405 - 2-dehydropantoate 2-reductase, at 1,345,891 to 1,346,802 _RS06405 BWI76_RS06410: BWI76_RS06410 - YajQ family cyclic di-GMP-binding protein, at 1,346,945 to 1,347,436 _RS06410 BWI76_RS06415: BWI76_RS06415 - MFS transporter, at 1,347,551 to 1,348,915 _RS06415 Position (kb) 1346 1347 1348Strain fitness (log2 ratio) -1 0 1at 1346.458 kb on - strand, within BWI76_RS06405at 1346.480 kb on - strand, within BWI76_RS06405at 1346.537 kb on - strand, within BWI76_RS06405at 1346.719 kb on + strandat 1346.727 kb on - strandat 1347.242 kb on - strand, within BWI76_RS06410at 1347.646 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2
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1,346,458 - BWI76_RS06405 0.62 -1.1
1,346,480 - BWI76_RS06405 0.65 +0.4
1,346,537 - BWI76_RS06405 0.71 -0.5
1,346,719 + +0.9
1,346,727 - +0.8
1,347,242 - BWI76_RS06410 0.60 +0.8
1,347,646 - +0.5

Or see this region's nucleotide sequence