Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04825
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
1,007,616 | - | +0.3 | |||
1,007,661 | + | -2.1 | |||
1,007,665 | + | -0.5 | |||
1,007,692 | + | -0.3 | |||
1,007,852 | + | BWI76_RS04825 | 0.11 | -0.4 | |
1,007,862 | + | BWI76_RS04825 | 0.12 | -1.1 | |
1,007,862 | + | BWI76_RS04825 | 0.12 | -0.2 | |
1,007,903 | - | BWI76_RS04825 | 0.16 | -2.4 | |
1,007,967 | + | -0.4 | |||
1,007,983 | - | BWI76_RS04825 | 0.24 | +0.2 | |
1,008,029 | + | BWI76_RS04825 | 0.28 | -0.4 | |
1,008,037 | - | BWI76_RS04825 | 0.29 | +0.3 | |
1,008,331 | - | BWI76_RS04825 | 0.57 | -0.3 | |
1,008,531 | + | BWI76_RS04825 | 0.76 | -0.5 | |
1,008,539 | - | BWI76_RS04825 | 0.77 | +0.4 | |
1,008,578 | + | BWI76_RS04825 | 0.81 | -1.4 | |
1,008,583 | + | BWI76_RS04825 | 0.81 | +1.4 | |
1,008,878 | - | -0.8 | |||
1,009,028 | + | BWI76_RS04830 | 0.18 | -0.1 | |
1,009,028 | + | BWI76_RS04830 | 0.18 | +0.7 | |
1,009,267 | + | BWI76_RS04830 | 0.38 | -0.6 | |
1,009,418 | + | BWI76_RS04830 | 0.50 | -1.0 | |
1,009,480 | + | BWI76_RS04830 | 0.56 | +0.2 | |
1,009,486 | + | BWI76_RS04830 | 0.56 | -1.2 | |
1,009,562 | - | BWI76_RS04830 | 0.62 | -1.0 | |
1,009,712 | + | BWI76_RS04830 | 0.75 | +0.0 | |
1,009,714 | + | BWI76_RS04830 | 0.75 | +0.5 | |
1,009,777 | + | BWI76_RS04830 | 0.80 | +0.1 |
Or see this region's nucleotide sequence