Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03695 and BWI76_RS03700 are separated by 339 nucleotides BWI76_RS03700 and BWI76_RS03705 are separated by 6 nucleotides BWI76_RS03705 and BWI76_RS03710 overlap by 11 nucleotides
BWI76_RS03695: BWI76_RS03695 - DUF1127 domain-containing protein, at 767,908 to 768,072
_RS03695
BWI76_RS03700: BWI76_RS03700 - hypothetical protein, at 768,412 to 768,876
_RS03700
BWI76_RS03705: BWI76_RS03705 - secretion protein, at 768,883 to 769,950
_RS03705
BWI76_RS03710: BWI76_RS03710 - hypothetical protein, at 769,940 to 771,004
_RS03710
Position (kb) 768
769
770 Strain fitness (log2 ratio) -2
-1
0
1
2 at 767.900 kb on - strand at 768.197 kb on - strand at 768.262 kb on - strand at 768.266 kb on + strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.610 kb on - strand, within BWI76_RS03700 at 768.637 kb on - strand, within BWI76_RS03700 at 768.673 kb on - strand, within BWI76_RS03700 at 768.914 kb on + strand at 768.922 kb on - strand at 768.950 kb on - strand at 769.219 kb on - strand, within BWI76_RS03705 at 769.228 kb on + strand, within BWI76_RS03705 at 769.228 kb on + strand, within BWI76_RS03705 at 769.228 kb on + strand, within BWI76_RS03705 at 769.236 kb on - strand, within BWI76_RS03705 at 769.247 kb on + strand, within BWI76_RS03705 at 769.317 kb on - strand, within BWI76_RS03705 at 769.529 kb on + strand, within BWI76_RS03705 at 769.532 kb on - strand, within BWI76_RS03705 at 769.532 kb on - strand, within BWI76_RS03705 at 769.537 kb on + strand, within BWI76_RS03705 at 769.640 kb on - strand, within BWI76_RS03705 at 769.732 kb on - strand, within BWI76_RS03705 at 769.869 kb on - strand at 769.877 kb on - strand at 769.930 kb on + strand at 769.971 kb on - strand at 770.171 kb on + strand, within BWI76_RS03710 at 770.210 kb on + strand, within BWI76_RS03710 at 770.372 kb on + strand, within BWI76_RS03710 at 770.372 kb on + strand, within BWI76_RS03710 at 770.380 kb on - strand, within BWI76_RS03710 at 770.380 kb on - strand, within BWI76_RS03710 at 770.672 kb on - strand, within BWI76_RS03710 at 770.677 kb on - strand, within BWI76_RS03710 at 770.677 kb on - strand, within BWI76_RS03710 at 770.732 kb on - strand, within BWI76_RS03710 at 770.768 kb on - strand, within BWI76_RS03710 at 770.813 kb on + strand, within BWI76_RS03710
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2 remove 767,900 - -0.6 768,197 - -1.4 768,262 - -0.1 768,266 + +0.2 768,297 - +1.9 768,297 - +0.5 768,297 - +1.3 768,610 - BWI76_RS03700 0.43 -0.1 768,637 - BWI76_RS03700 0.48 -0.1 768,673 - BWI76_RS03700 0.56 +0.7 768,914 + -2.4 768,922 - -0.2 768,950 - -0.1 769,219 - BWI76_RS03705 0.31 -0.7 769,228 + BWI76_RS03705 0.32 +2.2 769,228 + BWI76_RS03705 0.32 +1.6 769,228 + BWI76_RS03705 0.32 -0.8 769,236 - BWI76_RS03705 0.33 +0.3 769,247 + BWI76_RS03705 0.34 +0.8 769,317 - BWI76_RS03705 0.41 +0.3 769,529 + BWI76_RS03705 0.60 -0.6 769,532 - BWI76_RS03705 0.61 -0.4 769,532 - BWI76_RS03705 0.61 +0.4 769,537 + BWI76_RS03705 0.61 +2.7 769,640 - BWI76_RS03705 0.71 -0.0 769,732 - BWI76_RS03705 0.79 +2.3 769,869 - +1.1 769,877 - +0.3 769,930 + -0.2 769,971 - -0.7 770,171 + BWI76_RS03710 0.22 -0.0 770,210 + BWI76_RS03710 0.25 +0.2 770,372 + BWI76_RS03710 0.41 +0.0 770,372 + BWI76_RS03710 0.41 +1.6 770,380 - BWI76_RS03710 0.41 -0.6 770,380 - BWI76_RS03710 0.41 -0.7 770,672 - BWI76_RS03710 0.69 +1.6 770,677 - BWI76_RS03710 0.69 -0.9 770,677 - BWI76_RS03710 0.69 +1.0 770,732 - BWI76_RS03710 0.74 -1.3 770,768 - BWI76_RS03710 0.78 -0.0 770,813 + BWI76_RS03710 0.82 +1.0
Or see this region's nucleotide sequence