Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02890 and BWI76_RS02895 overlap by 4 nucleotides BWI76_RS02895 and BWI76_RS02900 are separated by 124 nucleotides
BWI76_RS02890: BWI76_RS02890 - L-seryl-tRNA selenium transferase, at 589,651 to 590,769
_RS02890
BWI76_RS02895: BWI76_RS02895 - hypothetical protein, at 590,766 to 591,506
_RS02895
BWI76_RS02900: BWI76_RS02900 - 6-phosphogluconolactonase, at 591,631 to 592,782
_RS02900
Position (kb) 590
591
592 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 589.932 kb on + strand, within BWI76_RS02890 at 589.971 kb on + strand, within BWI76_RS02890 at 589.971 kb on + strand, within BWI76_RS02890 at 590.493 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.532 kb on + strand, within BWI76_RS02890 at 590.535 kb on - strand, within BWI76_RS02890 at 590.535 kb on - strand, within BWI76_RS02890 at 590.605 kb on + strand, within BWI76_RS02890 at 590.662 kb on - strand at 590.712 kb on + strand at 591.169 kb on - strand, within BWI76_RS02895 at 591.262 kb on + strand, within BWI76_RS02895 at 591.270 kb on - strand, within BWI76_RS02895 at 591.585 kb on + strand at 591.585 kb on + strand at 591.593 kb on - strand at 591.593 kb on - strand at 591.623 kb on - strand at 591.719 kb on - strand at 591.757 kb on - strand, within BWI76_RS02900 at 591.757 kb on - strand, within BWI76_RS02900 at 591.855 kb on - strand, within BWI76_RS02900 at 592.046 kb on + strand, within BWI76_RS02900 at 592.049 kb on - strand, within BWI76_RS02900 at 592.327 kb on + strand, within BWI76_RS02900 at 592.349 kb on + strand, within BWI76_RS02900 at 592.357 kb on - strand, within BWI76_RS02900 at 592.463 kb on - strand, within BWI76_RS02900 at 592.475 kb on + strand, within BWI76_RS02900 at 592.486 kb on + strand, within BWI76_RS02900 at 592.494 kb on - strand, within BWI76_RS02900
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2 remove 589,932 + BWI76_RS02890 0.25 -0.0 589,971 + BWI76_RS02890 0.29 -0.0 589,971 + BWI76_RS02890 0.29 -2.1 590,493 + BWI76_RS02890 0.75 +1.1 590,527 + BWI76_RS02890 0.78 -0.6 590,527 + BWI76_RS02890 0.78 +1.0 590,527 + BWI76_RS02890 0.78 +0.5 590,527 + BWI76_RS02890 0.78 +1.1 590,527 + BWI76_RS02890 0.78 +0.3 590,527 + BWI76_RS02890 0.78 +0.3 590,532 + BWI76_RS02890 0.79 +0.4 590,535 - BWI76_RS02890 0.79 -2.3 590,535 - BWI76_RS02890 0.79 -0.7 590,605 + BWI76_RS02890 0.85 -3.3 590,662 - -0.3 590,712 + -0.9 591,169 - BWI76_RS02895 0.54 -0.6 591,262 + BWI76_RS02895 0.67 -0.9 591,270 - BWI76_RS02895 0.68 -1.3 591,585 + -0.9 591,585 + -0.5 591,593 - +1.3 591,593 - -1.0 591,623 - -0.8 591,719 - +0.3 591,757 - BWI76_RS02900 0.11 +1.3 591,757 - BWI76_RS02900 0.11 -0.1 591,855 - BWI76_RS02900 0.19 +0.4 592,046 + BWI76_RS02900 0.36 -1.0 592,049 - BWI76_RS02900 0.36 -1.3 592,327 + BWI76_RS02900 0.60 -3.2 592,349 + BWI76_RS02900 0.62 -0.2 592,357 - BWI76_RS02900 0.63 +0.2 592,463 - BWI76_RS02900 0.72 +0.2 592,475 + BWI76_RS02900 0.73 +0.5 592,486 + BWI76_RS02900 0.74 -0.5 592,494 - BWI76_RS02900 0.75 -1.8
Or see this region's nucleotide sequence