Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27850
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
5,775,268 | + | BWI76_RS27845 | 0.40 | -0.8 | |
5,775,370 | + | BWI76_RS27845 | 0.48 | -0.9 | |
5,775,378 | - | BWI76_RS27845 | 0.49 | -1.8 | |
5,775,403 | - | BWI76_RS27845 | 0.51 | -0.6 | |
5,775,513 | - | BWI76_RS27845 | 0.60 | -0.3 | |
5,776,186 | - | +0.4 | |||
5,776,308 | + | +0.2 | |||
5,776,323 | + | BWI76_RS27850 | 0.10 | +1.7 | |
5,776,503 | + | BWI76_RS27850 | 0.30 | +0.9 | |
5,776,799 | + | BWI76_RS27850 | 0.62 | -0.4 | |
5,776,804 | + | BWI76_RS27850 | 0.62 | -1.5 | |
5,776,804 | + | BWI76_RS27850 | 0.62 | -1.2 | |
5,776,812 | - | BWI76_RS27850 | 0.63 | +1.8 | |
5,777,023 | + | BWI76_RS27850 | 0.86 | +1.2 | |
5,777,089 | + | -1.1 | |||
5,777,410 | + | +0.7 | |||
5,777,410 | + | +0.4 | |||
5,777,418 | - | -2.6 | |||
5,777,425 | + | -0.8 | |||
5,777,442 | - | +0.1 | |||
5,777,521 | - | BWI76_RS27855 | 0.11 | +0.5 | |
5,777,666 | + | BWI76_RS27855 | 0.21 | +0.0 | |
5,777,828 | - | BWI76_RS27855 | 0.33 | +0.0 | |
5,777,997 | + | BWI76_RS27855 | 0.46 | -0.1 | |
5,778,075 | + | -0.4 | |||
5,778,075 | + | BWI76_RS27855 | 0.52 | +1.2 | |
5,778,075 | + | BWI76_RS27855 | 0.52 | +0.1 | |
5,778,075 | + | BWI76_RS27855 | 0.52 | +0.5 | |
5,778,098 | + | BWI76_RS27855 | 0.54 | +0.4 |
Or see this region's nucleotide sequence