Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26260 and BWI76_RS26265 overlap by 26 nucleotides BWI76_RS26265 and BWI76_RS26270 are separated by 42 nucleotides BWI76_RS26270 and BWI76_RS26275 are separated by 50 nucleotides
BWI76_RS26260: BWI76_RS26260 - hypothetical protein, at 5,436,830 to 5,437,468
_RS26260
BWI76_RS26265: BWI76_RS26265 - hypothetical protein, at 5,437,443 to 5,437,673
_RS26265
BWI76_RS26270: BWI76_RS26270 - N-acetyltransferase, at 5,437,716 to 5,438,207
_RS26270
BWI76_RS26275: BWI76_RS26275 - gamma-glutamyltransferase, at 5,438,258 to 5,440,000
_RS26275
Position (kb) 5437
5438
5439 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5436.731 kb on - strand at 5436.803 kb on + strand at 5436.868 kb on + strand at 5436.946 kb on - strand, within BWI76_RS26260 at 5437.050 kb on - strand, within BWI76_RS26260 at 5437.094 kb on - strand, within BWI76_RS26260 at 5437.123 kb on + strand, within BWI76_RS26260 at 5437.220 kb on - strand, within BWI76_RS26260 at 5437.335 kb on - strand, within BWI76_RS26260 at 5437.736 kb on - strand at 5437.875 kb on - strand, within BWI76_RS26270 at 5437.894 kb on + strand, within BWI76_RS26270 at 5437.929 kb on - strand, within BWI76_RS26270 at 5437.936 kb on - strand, within BWI76_RS26270 at 5437.990 kb on + strand, within BWI76_RS26270 at 5438.044 kb on - strand, within BWI76_RS26270 at 5438.074 kb on + strand, within BWI76_RS26270 at 5438.182 kb on + strand at 5438.212 kb on + strand at 5438.227 kb on - strand at 5438.248 kb on - strand at 5438.256 kb on + strand at 5438.264 kb on - strand at 5438.264 kb on - strand at 5438.264 kb on - strand at 5438.309 kb on - strand at 5438.309 kb on - strand at 5438.337 kb on - strand at 5438.763 kb on + strand, within BWI76_RS26275 at 5438.773 kb on + strand, within BWI76_RS26275 at 5438.773 kb on + strand, within BWI76_RS26275 at 5439.138 kb on - strand, within BWI76_RS26275 at 5439.140 kb on + strand, within BWI76_RS26275 at 5439.140 kb on + strand, within BWI76_RS26275 at 5439.148 kb on - strand, within BWI76_RS26275 at 5439.148 kb on - strand, within BWI76_RS26275
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-1 remove 5,436,731 - -1.7 5,436,803 + -0.2 5,436,868 + -0.1 5,436,946 - BWI76_RS26260 0.18 -0.1 5,437,050 - BWI76_RS26260 0.34 -1.5 5,437,094 - BWI76_RS26260 0.41 -1.3 5,437,123 + BWI76_RS26260 0.46 +0.4 5,437,220 - BWI76_RS26260 0.61 +0.1 5,437,335 - BWI76_RS26260 0.79 +0.0 5,437,736 - -0.3 5,437,875 - BWI76_RS26270 0.32 -0.6 5,437,894 + BWI76_RS26270 0.36 -0.4 5,437,929 - BWI76_RS26270 0.43 +3.3 5,437,936 - BWI76_RS26270 0.45 -2.2 5,437,990 + BWI76_RS26270 0.56 +1.1 5,438,044 - BWI76_RS26270 0.67 +1.1 5,438,074 + BWI76_RS26270 0.73 +1.9 5,438,182 + +1.4 5,438,212 + -1.1 5,438,227 - -1.3 5,438,248 - -0.0 5,438,256 + -0.1 5,438,264 - -0.6 5,438,264 - +1.4 5,438,264 - +0.2 5,438,309 - +0.2 5,438,309 - +1.8 5,438,337 - +0.1 5,438,763 + BWI76_RS26275 0.29 +3.3 5,438,773 + BWI76_RS26275 0.30 -0.1 5,438,773 + BWI76_RS26275 0.30 +0.6 5,439,138 - BWI76_RS26275 0.50 +0.5 5,439,140 + BWI76_RS26275 0.51 -1.1 5,439,140 + BWI76_RS26275 0.51 +0.6 5,439,148 - BWI76_RS26275 0.51 -1.3 5,439,148 - BWI76_RS26275 0.51 +0.4
Or see this region's nucleotide sequence