Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26200
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
5,418,520 | + | BWI76_RS26195 | 0.62 | -1.5 | |
5,418,538 | - | BWI76_RS26195 | 0.63 | -0.6 | |
5,418,560 | - | BWI76_RS26195 | 0.64 | -0.9 | |
5,418,560 | - | BWI76_RS26195 | 0.64 | +0.8 | |
5,418,684 | + | BWI76_RS26195 | 0.69 | +0.9 | |
5,418,738 | + | BWI76_RS26195 | 0.71 | +0.1 | |
5,418,757 | - | BWI76_RS26195 | 0.72 | -0.6 | |
5,419,143 | + | BWI76_RS26195 | 0.88 | +3.4 | |
5,419,187 | + | BWI76_RS26195 | 0.90 | -0.4 | |
5,419,195 | - | -0.7 | |||
5,419,272 | + | +0.2 | |||
5,419,304 | + | -2.5 | |||
5,419,378 | + | -0.6 | |||
5,419,408 | - | -2.6 | |||
5,420,112 | - | BWI76_RS26200 | 0.46 | -0.2 | |
5,420,273 | - | BWI76_RS26200 | 0.57 | -1.6 | |
5,420,275 | + | BWI76_RS26200 | 0.57 | -2.2 | |
5,420,280 | + | BWI76_RS26200 | 0.58 | -0.5 | |
5,420,283 | - | BWI76_RS26200 | 0.58 | -1.2 | |
5,420,578 | + | BWI76_RS26200 | 0.78 | -0.3 | |
5,420,670 | - | BWI76_RS26200 | 0.85 | -0.9 | |
5,420,724 | - | BWI76_RS26200 | 0.88 | -3.5 | |
5,420,852 | + | -0.3 | |||
5,420,869 | - | +0.2 | |||
5,420,896 | + | +1.6 | |||
5,420,904 | - | +0.0 | |||
5,421,000 | + | -0.1 | |||
5,421,506 | - | BWI76_RS26205 | 0.48 | -0.1 | |
5,421,640 | + | BWI76_RS26205 | 0.58 | -0.2 | |
5,421,648 | - | BWI76_RS26205 | 0.59 | -0.0 |
Or see this region's nucleotide sequence