Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22865 and BWI76_RS22870 are separated by 111 nucleotides BWI76_RS22870 and BWI76_RS22875 are separated by 536 nucleotides
BWI76_RS22865: BWI76_RS22865 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 4,769,917 to 4,770,762
_RS22865
BWI76_RS22870: BWI76_RS22870 - LOG family protein, at 4,770,874 to 4,772,241
_RS22870
BWI76_RS22875: BWI76_RS22875 - serine transporter, at 4,772,778 to 4,774,067
_RS22875
Position (kb)
4770
4771
4772
4773 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4769.880 kb on - strand at 4769.948 kb on - strand at 4770.001 kb on - strand at 4770.003 kb on + strand, within BWI76_RS22865 at 4770.011 kb on - strand, within BWI76_RS22865 at 4770.061 kb on - strand, within BWI76_RS22865 at 4770.091 kb on + strand, within BWI76_RS22865 at 4770.099 kb on + strand, within BWI76_RS22865 at 4770.399 kb on + strand, within BWI76_RS22865 at 4770.415 kb on - strand, within BWI76_RS22865 at 4770.442 kb on + strand, within BWI76_RS22865 at 4770.830 kb on + strand at 4770.892 kb on - strand at 4771.221 kb on - strand, within BWI76_RS22870 at 4771.287 kb on + strand, within BWI76_RS22870 at 4771.295 kb on + strand, within BWI76_RS22870 at 4771.635 kb on - strand, within BWI76_RS22870 at 4771.784 kb on + strand, within BWI76_RS22870 at 4771.916 kb on - strand, within BWI76_RS22870 at 4771.989 kb on + strand, within BWI76_RS22870 at 4772.059 kb on - strand, within BWI76_RS22870 at 4772.103 kb on - strand, within BWI76_RS22870 at 4772.186 kb on + strand at 4772.217 kb on - strand at 4772.286 kb on - strand at 4772.527 kb on - strand at 4772.785 kb on - strand at 4772.889 kb on + strand at 4772.971 kb on + strand, within BWI76_RS22875 at 4773.154 kb on + strand, within BWI76_RS22875
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-1 remove 4,769,880 - -0.4 4,769,948 - -2.3 4,770,001 - +0.1 4,770,003 + BWI76_RS22865 0.10 -0.6 4,770,011 - BWI76_RS22865 0.11 -1.2 4,770,061 - BWI76_RS22865 0.17 +1.1 4,770,091 + BWI76_RS22865 0.21 +1.5 4,770,099 + BWI76_RS22865 0.22 -0.5 4,770,399 + BWI76_RS22865 0.57 -0.0 4,770,415 - BWI76_RS22865 0.59 -0.5 4,770,442 + BWI76_RS22865 0.62 -1.0 4,770,830 + +1.3 4,770,892 - +0.6 4,771,221 - BWI76_RS22870 0.25 +0.9 4,771,287 + BWI76_RS22870 0.30 +0.2 4,771,295 + BWI76_RS22870 0.31 -1.2 4,771,635 - BWI76_RS22870 0.56 +1.0 4,771,784 + BWI76_RS22870 0.67 +0.2 4,771,916 - BWI76_RS22870 0.76 -0.3 4,771,989 + BWI76_RS22870 0.82 -1.3 4,772,059 - BWI76_RS22870 0.87 +3.1 4,772,103 - BWI76_RS22870 0.90 +2.2 4,772,186 + -0.5 4,772,217 - +0.0 4,772,286 - -1.1 4,772,527 - +1.9 4,772,785 - -1.6 4,772,889 + -1.2 4,772,971 + BWI76_RS22875 0.15 -0.2 4,773,154 + BWI76_RS22875 0.29 +1.9
Or see this region's nucleotide sequence