Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20210
Experiment: Tetrahymena sp., Mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetrahymena sp., Mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
4,234,908 | + | BWI76_RS20205 | 0.36 | -1.1 | |
4,235,130 | - | BWI76_RS20205 | 0.55 | -2.0 | |
4,235,207 | + | BWI76_RS20205 | 0.61 | -0.2 | |
4,235,291 | - | BWI76_RS20205 | 0.68 | -2.6 | |
4,235,390 | - | BWI76_RS20205 | 0.76 | +0.7 | |
4,235,442 | - | BWI76_RS20205 | 0.80 | -1.5 | |
4,235,459 | + | BWI76_RS20205 | 0.82 | -1.2 | |
4,235,459 | + | BWI76_RS20205 | 0.82 | -0.4 | |
4,235,757 | + | -2.1 | |||
4,235,757 | + | +1.4 | |||
4,235,872 | - | BWI76_RS20210 | 0.17 | +0.8 | |
4,235,935 | + | BWI76_RS20210 | 0.27 | -0.5 | |
4,235,943 | - | BWI76_RS20210 | 0.29 | +2.7 | |
4,235,943 | - | BWI76_RS20210 | 0.29 | +0.1 | |
4,235,943 | - | BWI76_RS20210 | 0.29 | +1.1 | |
4,236,053 | - | BWI76_RS20210 | 0.47 | -0.9 | |
4,236,285 | + | BWI76_RS20210 | 0.86 | +1.2 | |
4,236,290 | + | BWI76_RS20210 | 0.86 | -0.6 | |
4,236,390 | + | +2.0 | |||
4,236,458 | + | -0.4 | |||
4,236,619 | - | BWI76_RS20215 | 0.11 | -0.9 | |
4,236,684 | - | BWI76_RS20215 | 0.14 | +1.2 | |
4,236,859 | + | BWI76_RS20215 | 0.24 | -3.1 | |
4,237,010 | - | BWI76_RS20215 | 0.32 | +0.8 | |
4,237,167 | - | BWI76_RS20215 | 0.41 | -1.9 | |
4,237,265 | + | BWI76_RS20215 | 0.46 | -1.9 | |
4,237,357 | - | BWI76_RS20215 | 0.51 | +1.8 |
Or see this region's nucleotide sequence