Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17830
Experiment: Tetrahymena sp., Mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetrahymena sp., Mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
3,705,136 | - | BWI76_RS17825 | 0.15 | -0.1 | |
3,705,520 | + | BWI76_RS17825 | 0.49 | +0.8 | |
3,705,763 | - | BWI76_RS17825 | 0.70 | -1.8 | |
3,705,780 | - | BWI76_RS17825 | 0.71 | +0.9 | |
3,705,861 | + | BWI76_RS17825 | 0.79 | +0.2 | |
3,705,939 | - | BWI76_RS17825 | 0.85 | +0.2 | |
3,706,011 | + | +1.3 | |||
3,706,035 | + | -0.1 | |||
3,706,272 | - | BWI76_RS17830 | 0.15 | +0.3 | |
3,706,345 | + | BWI76_RS17830 | 0.21 | -1.3 | |
3,706,353 | - | BWI76_RS17830 | 0.22 | -0.2 | |
3,706,355 | + | BWI76_RS17830 | 0.22 | +1.3 | |
3,706,377 | - | BWI76_RS17830 | 0.24 | -0.3 | |
3,706,647 | - | BWI76_RS17830 | 0.49 | -1.1 | |
3,706,665 | + | BWI76_RS17830 | 0.50 | -0.3 | |
3,706,885 | + | BWI76_RS17830 | 0.71 | -0.8 | |
3,706,913 | - | BWI76_RS17830 | 0.73 | -1.5 | |
3,706,996 | - | BWI76_RS17830 | 0.81 | -0.3 | |
3,707,192 | + | +0.8 | |||
3,707,397 | - | BWI76_RS17835 | 0.21 | +0.5 | |
3,707,530 | - | BWI76_RS17835 | 0.37 | -1.0 | |
3,707,588 | - | BWI76_RS17835 | 0.44 | -1.8 | |
3,707,643 | - | BWI76_RS17835 | 0.51 | -0.7 | |
3,707,704 | - | BWI76_RS17835 | 0.58 | +0.2 | |
3,707,866 | + | BWI76_RS17835 | 0.77 | +0.3 | |
3,707,961 | - | BWI76_RS17835 | 0.88 | +0.8 | |
3,707,997 | - | +0.8 |
Or see this region's nucleotide sequence