Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05425
Experiment: Tetrahymena sp., Mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetrahymena sp., Mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
1,138,364 | + | BWI76_RS05420 | 0.30 | -3.6 | |
1,138,421 | + | BWI76_RS05420 | 0.34 | -1.5 | |
1,138,507 | - | BWI76_RS05420 | 0.42 | +0.6 | |
1,138,532 | + | BWI76_RS05420 | 0.44 | +1.0 | |
1,138,540 | - | BWI76_RS05420 | 0.44 | +0.2 | |
1,138,597 | + | BWI76_RS05420 | 0.49 | +2.1 | |
1,138,631 | + | BWI76_RS05420 | 0.52 | +0.2 | |
1,138,714 | - | BWI76_RS05420 | 0.59 | -0.4 | |
1,138,942 | - | BWI76_RS05420 | 0.78 | -1.8 | |
1,138,982 | - | BWI76_RS05420 | 0.81 | +0.2 | |
1,138,982 | - | BWI76_RS05420 | 0.81 | -1.3 | |
1,139,093 | - | +0.4 | |||
1,139,205 | - | -2.0 | |||
1,139,242 | + | -0.3 | |||
1,139,367 | - | +1.3 | |||
1,139,456 | + | BWI76_RS05425 | 0.20 | -2.0 | |
1,139,801 | - | BWI76_RS05425 | 0.62 | -3.1 | |
1,139,890 | - | BWI76_RS05425 | 0.73 | -0.6 | |
1,140,133 | + | -0.1 | |||
1,140,211 | - | -1.4 | |||
1,140,243 | + | -2.6 | |||
1,140,251 | - | -0.4 | |||
1,140,256 | - | +0.6 | |||
1,140,481 | + | BWI76_RS05430 | 0.38 | +0.3 | |
1,140,540 | + | BWI76_RS05430 | 0.46 | +1.2 | |
1,140,752 | - | BWI76_RS05430 | 0.73 | -0.8 | |
1,141,076 | - | -2.1 |
Or see this region's nucleotide sequence