Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14570

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,256,135	+		PFLU_RS14565	0.14	-1.5
3,256,157	+		PFLU_RS14565	0.17	-2.7
3,256,158	-		PFLU_RS14565	0.17	+2.1
3,256,158	-		PFLU_RS14565	0.17	-1.0
3,256,170	+		PFLU_RS14565	0.18	+1.6
3,256,170	+		PFLU_RS14565	0.18	-1.3
3,256,170	+		PFLU_RS14565	0.18	+1.8
3,256,171	-		PFLU_RS14565	0.18	-1.1
3,256,171	-		PFLU_RS14565	0.18	-0.7
3,256,171	-		PFLU_RS14565	0.18	+1.1
3,256,171	-		PFLU_RS14565	0.18	-0.4
3,256,175	+		PFLU_RS14565	0.18	+0.7
3,256,176	-		PFLU_RS14565	0.19	+0.3
3,256,176	-		PFLU_RS14565	0.19	-0.6
3,256,209	+		PFLU_RS14565	0.22	+0.9
3,256,209	+		PFLU_RS14565	0.22	-1.7
3,256,209	+		PFLU_RS14565	0.22	-1.2
3,256,209	+		PFLU_RS14565	0.22	+0.4
3,256,209	+		PFLU_RS14565	0.22	+0.3
3,256,209	+		PFLU_RS14565	0.22	+0.7
3,256,209	+		PFLU_RS14565	0.22	-1.7
3,256,209	+		PFLU_RS14565	0.22	+0.7
3,256,209	+		PFLU_RS14565	0.22	+0.1
3,256,209	+		PFLU_RS14565	0.22	+0.7
3,256,210	-		PFLU_RS14565	0.22	+0.4
3,256,210	-		PFLU_RS14565	0.22	+0.3
3,256,210	-		PFLU_RS14565	0.22	+1.3
3,256,210	-		PFLU_RS14565	0.22	+1.0
3,256,210	-		PFLU_RS14565	0.22	-1.0
3,256,210	-		PFLU_RS14565	0.22	+1.4
3,256,210	-		PFLU_RS14565	0.22	-0.1
3,256,210	-		PFLU_RS14565	0.22	+1.0
3,256,236	+		PFLU_RS14565	0.25	-1.3
3,256,237	-		PFLU_RS14565	0.25	+0.9
3,256,262	+		PFLU_RS14565	0.28	-0.7
3,256,262	+		PFLU_RS14565	0.28	+0.6
3,256,263	-		PFLU_RS14565	0.28	-0.3
3,256,522	+		PFLU_RS14565	0.56	+1.1
3,256,522	+		PFLU_RS14565	0.56	-0.8
3,256,523	-		PFLU_RS14565	0.56	-0.5
3,256,523	-		PFLU_RS14565	0.56	+1.3
3,256,567	+		PFLU_RS14565	0.60	-0.9
3,256,567	+		PFLU_RS14565	0.60	-1.5
3,256,567	+		PFLU_RS14565	0.60	+1.3
3,256,568	-		PFLU_RS14565	0.61	+0.4
3,256,568	-		PFLU_RS14565	0.61	-0.2
3,256,568	-		PFLU_RS14565	0.61	-0.3
3,256,568	-		PFLU_RS14565	0.61	-0.0
3,256,609	+		PFLU_RS14565	0.65	-0.3
3,256,609	+		PFLU_RS14565	0.65	-3.0
3,256,765	+		PFLU_RS14565	0.82	+1.3
3,256,765	+		PFLU_RS14565	0.82	-2.5
3,256,766	-		PFLU_RS14565	0.82	-0.5
3,256,766	-		PFLU_RS14565	0.82	+0.2
3,256,766	-		PFLU_RS14565	0.82	+0.9
3,256,766	-		PFLU_RS14565	0.82	+0.2
3,256,843	+				+0.7
3,256,843	+				+0.2
3,256,843	+				-1.0
3,256,843	+				-1.5
3,256,843	+				-0.8
3,256,843	+				+0.1
3,256,844	-				-1.7
3,256,844	-				-1.0
3,256,844	-				-0.8
3,256,844	-				+0.4
3,256,844	-				-0.7
3,256,879	+				-2.3
3,256,879	+				-0.1
3,256,879	+				-1.4
3,256,879	+				-0.3
3,256,880	-				+1.5
3,256,880	-				-0.3
3,256,880	-				+0.3
3,256,880	-				-2.4
3,256,945	+				+1.9
3,256,945	+				-0.6
3,256,946	-				+0.3
3,256,948	+				+0.7
3,256,949	-				-2.0
3,256,951	+				-0.0
3,256,951	+				-1.0
3,256,951	+				-0.7
3,256,951	+				+1.1
3,256,952	-				+0.6
3,256,952	-				-0.3
3,256,952	-				-0.2
3,256,965	-				-2.5
3,257,023	+				-0.6
3,257,057	-				+0.3
3,257,085	+				-0.4
3,257,085	+				-1.0
3,257,086	-				-0.0
3,257,086	-				+2.3
3,257,144	+		PFLU_RS14570	0.11	-1.7
3,257,144	+		PFLU_RS14570	0.11	+1.9
3,257,144	+		PFLU_RS14570	0.11	-1.7
3,257,144	+		PFLU_RS14570	0.11	+0.8
3,257,145	-		PFLU_RS14570	0.12	-0.1
3,257,145	-		PFLU_RS14570	0.12	-1.9
3,257,145	-		PFLU_RS14570	0.12	-0.3
3,257,145	-		PFLU_RS14570	0.12	+1.5
3,257,145	-		PFLU_RS14570	0.12	-0.4
3,257,194	+		PFLU_RS14570	0.20	+1.7
3,257,194	+		PFLU_RS14570	0.20	+1.1
3,257,195	-		PFLU_RS14570	0.20	-1.3
3,257,251	+		PFLU_RS14570	0.30	+0.6
3,257,251	+		PFLU_RS14570	0.30	-1.3
3,257,251	+		PFLU_RS14570	0.30	-0.3
3,257,252	-		PFLU_RS14570	0.30	+0.3
3,257,284	+		PFLU_RS14570	0.36	-1.3
3,257,285	-		PFLU_RS14570	0.36	-0.8
3,257,359	+		PFLU_RS14570	0.49	-0.7
3,257,360	-		PFLU_RS14570	0.50	-1.9
3,257,360	-		PFLU_RS14570	0.50	-1.5
3,257,360	-		PFLU_RS14570	0.50	-0.0
3,257,360	-		PFLU_RS14570	0.50	-1.9
3,257,408	+		PFLU_RS14570	0.58	+1.3
3,257,408	+		PFLU_RS14570	0.58	-0.5
3,257,548	+		PFLU_RS14570	0.83	-0.4
3,257,548	+		PFLU_RS14570	0.83	-1.3
3,257,549	-		PFLU_RS14570	0.83	-1.5
3,257,549	-		PFLU_RS14570	0.83	-1.7
3,257,641	+				+0.3
3,257,641	+				+1.1
3,257,641	+				-0.4
3,257,641	+				+1.0
3,257,641	+				-0.1
3,257,641	+				-0.3
3,257,641	+				+0.6
3,257,642	-				+0.4
3,257,642	-				+4.1
3,257,642	-				+0.3
3,257,642	-				-0.3
3,257,642	-				+0.2
3,257,677	+				-0.1
3,257,677	+				+0.3
3,257,677	+				+0.3
3,257,677	+				-0.7
3,257,677	+				-0.3
3,257,677	+				-1.4
3,257,677	+				+1.3
3,257,677	+				-0.7
3,257,677	+				-1.2
3,257,678	-				+0.8
3,257,678	-				+0.3
3,257,678	-				+0.0
3,257,678	-				+0.6
3,257,678	-				+2.3
3,257,678	-				+0.1
3,257,681	+				-1.7
3,257,681	+				-0.4
3,257,681	+				-3.2
3,257,681	+				-3.5
3,257,682	-				-0.3
3,257,682	-				-1.5
3,257,682	-				-2.9
3,257,682	-				-1.9
3,257,682	-				-2.8
3,257,682	-				-1.2
3,257,682	-				-1.2
3,257,682	-				-0.1
3,257,682	-				-1.3
3,257,743	+				-0.3
3,257,743	+				-1.0
3,257,743	+				+1.9
3,257,770	+				-0.3
3,257,771	-				+0.7
3,257,808	-				-0.3
3,257,808	-				+0.3
3,257,808	-				-2.4
3,257,808	-				+1.4
3,257,808	-				-1.3
3,257,911	+				+0.6
3,257,920	+				+1.4
3,257,921	-				-1.3
3,258,113	-		PFLU_RS14575	0.22	-0.5
3,258,137	+		PFLU_RS14575	0.23	-1.7
3,258,137	+		PFLU_RS14575	0.23	-0.6
3,258,137	+		PFLU_RS14575	0.23	-2.4
3,258,137	+		PFLU_RS14575	0.23	+1.3
3,258,138	-		PFLU_RS14575	0.23	-1.3
3,258,138	-		PFLU_RS14575	0.23	+1.5
3,258,138	-		PFLU_RS14575	0.23	+1.3
3,258,138	-		PFLU_RS14575	0.23	-0.8
3,258,138	-		PFLU_RS14575	0.23	-0.7
3,258,290	+		PFLU_RS14575	0.33	+2.9
3,258,455	+		PFLU_RS14575	0.44	-2.8
3,258,466	+		PFLU_RS14575	0.44	+0.4
3,258,466	+		PFLU_RS14575	0.44	+0.1
3,258,466	+		PFLU_RS14575	0.44	-0.0
3,258,467	-		PFLU_RS14575	0.44	-2.0
3,258,467	-		PFLU_RS14575	0.44	-0.7
3,258,467	-		PFLU_RS14575	0.44	+0.9
3,258,472	+		PFLU_RS14575	0.45	+1.3
3,258,472	+		PFLU_RS14575	0.45	+0.3
3,258,473	-		PFLU_RS14575	0.45	-1.5
3,258,473	-		PFLU_RS14575	0.45	-1.7
3,258,597	+		PFLU_RS14575	0.53	-0.3
3,258,598	-		PFLU_RS14575	0.53	+0.7
3,258,598	-		PFLU_RS14575	0.53	+1.6
3,258,605	+		PFLU_RS14575	0.53	-1.0
3,258,606	-		PFLU_RS14575	0.53	+0.3
3,258,606	-		PFLU_RS14575	0.53	-0.4
3,258,606	-		PFLU_RS14575	0.53	+0.8