Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13600

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,076,245	-		PFLU_RS13595	0.21	+0.7
3,076,245	-		PFLU_RS13595	0.21	-1.0
3,076,283	+		PFLU_RS13595	0.25	-2.4
3,076,283	+		PFLU_RS13595	0.25	-0.8
3,076,283	+		PFLU_RS13595	0.25	-0.8
3,076,283	+		PFLU_RS13595	0.25	-1.0
3,076,283	+		PFLU_RS13595	0.25	-0.7
3,076,283	+		PFLU_RS13595	0.25	+2.0
3,076,283	+		PFLU_RS13595	0.25	-0.4
3,076,283	+		PFLU_RS13595	0.25	+0.5
3,076,283	+		PFLU_RS13595	0.25	+0.2
3,076,283	+		PFLU_RS13595	0.25	-2.5
3,076,283	+		PFLU_RS13595	0.25	+1.3
3,076,283	+		PFLU_RS13595	0.25	-1.0
3,076,283	+		PFLU_RS13595	0.25	-2.3
3,076,283	+		PFLU_RS13595	0.25	+0.7
3,076,283	+		PFLU_RS13595	0.25	+1.3
3,076,283	+		PFLU_RS13595	0.25	+0.9
3,076,283	+		PFLU_RS13595	0.25	+2.1
3,076,283	+		PFLU_RS13595	0.25	+0.3
3,076,283	+		PFLU_RS13595	0.25	+0.2
3,076,283	+		PFLU_RS13595	0.25	-0.7
3,076,284	-		PFLU_RS13595	0.25	-0.7
3,076,284	-		PFLU_RS13595	0.25	-3.1
3,076,284	-		PFLU_RS13595	0.25	-1.5
3,076,284	-		PFLU_RS13595	0.25	+0.0
3,076,284	-		PFLU_RS13595	0.25	-1.3
3,076,284	-		PFLU_RS13595	0.25	-0.8
3,076,284	-		PFLU_RS13595	0.25	+0.2
3,076,284	-		PFLU_RS13595	0.25	+0.6
3,076,284	-		PFLU_RS13595	0.25	+0.5
3,076,284	-		PFLU_RS13595	0.25	+0.9
3,076,284	-		PFLU_RS13595	0.25	-1.3
3,076,284	-		PFLU_RS13595	0.25	-3.2
3,076,284	-		PFLU_RS13595	0.25	+0.3
3,076,284	-		PFLU_RS13595	0.25	-0.7
3,076,284	-		PFLU_RS13595	0.25	-1.4
3,076,284	-		PFLU_RS13595	0.25	+1.5
3,076,285	+		PFLU_RS13595	0.25	+0.4
3,076,285	+		PFLU_RS13595	0.25	-2.5
3,076,285	+		PFLU_RS13595	0.25	-1.7
3,076,285	+		PFLU_RS13595	0.25	+1.3
3,076,285	+		PFLU_RS13595	0.25	+1.0
3,076,285	+		PFLU_RS13595	0.25	+2.1
3,076,285	+		PFLU_RS13595	0.25	+1.8
3,076,285	+		PFLU_RS13595	0.25	-0.7
3,076,285	+		PFLU_RS13595	0.25	+0.1
3,076,285	+		PFLU_RS13595	0.25	+0.7
3,076,285	+		PFLU_RS13595	0.25	-0.5
3,076,285	+		PFLU_RS13595	0.25	-1.5
3,076,285	+		PFLU_RS13595	0.25	+0.2
3,076,285	+		PFLU_RS13595	0.25	+0.3
3,076,285	+		PFLU_RS13595	0.25	+0.4
3,076,285	+		PFLU_RS13595	0.25	-1.8
3,076,285	+		PFLU_RS13595	0.25	+1.1
3,076,285	+		PFLU_RS13595	0.25	+1.3
3,076,285	+		PFLU_RS13595	0.25	-1.8
3,076,285	+		PFLU_RS13595	0.25	-1.7
3,076,285	+		PFLU_RS13595	0.25	-1.3
3,076,285	+		PFLU_RS13595	0.25	+1.8
3,076,285	+		PFLU_RS13595	0.25	-1.8
3,076,285	+		PFLU_RS13595	0.25	+2.0
3,076,285	+		PFLU_RS13595	0.25	+1.2
3,076,285	+		PFLU_RS13595	0.25	-0.7
3,076,285	+		PFLU_RS13595	0.25	+0.3
3,076,285	+		PFLU_RS13595	0.25	-0.1
3,076,285	+		PFLU_RS13595	0.25	-1.0
3,076,286	-		PFLU_RS13595	0.25	+0.3
3,076,286	-		PFLU_RS13595	0.25	-2.4
3,076,286	-		PFLU_RS13595	0.25	-1.7
3,076,286	-		PFLU_RS13595	0.25	-0.7
3,076,286	-		PFLU_RS13595	0.25	+0.0
3,076,286	-		PFLU_RS13595	0.25	-0.3
3,076,286	-		PFLU_RS13595	0.25	+1.3
3,076,286	-		PFLU_RS13595	0.25	-1.7
3,076,286	-		PFLU_RS13595	0.25	-1.8
3,076,286	-		PFLU_RS13595	0.25	+1.1
3,076,286	-		PFLU_RS13595	0.25	-1.0
3,076,286	-		PFLU_RS13595	0.25	+1.8
3,076,286	-		PFLU_RS13595	0.25	-0.7
3,076,286	-		PFLU_RS13595	0.25	-0.5
3,076,286	-		PFLU_RS13595	0.25	-0.8
3,076,286	-		PFLU_RS13595	0.25	-0.7
3,076,286	-		PFLU_RS13595	0.25	+0.9
3,076,286	-		PFLU_RS13595	0.25	+0.2
3,076,286	-		PFLU_RS13595	0.25	-2.1
3,076,340	+		PFLU_RS13595	0.31	-0.2
3,076,340	+		PFLU_RS13595	0.31	-0.2
3,076,340	+		PFLU_RS13595	0.31	+0.3
3,076,340	+		PFLU_RS13595	0.31	+3.3
3,076,340	+		PFLU_RS13595	0.31	+1.1
3,076,340	+		PFLU_RS13595	0.31	+2.1
3,076,341	-		PFLU_RS13595	0.31	+0.3
3,076,341	-		PFLU_RS13595	0.31	-0.3
3,076,341	-		PFLU_RS13595	0.31	+1.7
3,076,341	-		PFLU_RS13595	0.31	+0.3
3,076,341	-		PFLU_RS13595	0.31	+0.2
3,076,341	-		PFLU_RS13595	0.31	-0.7
3,076,341	-		PFLU_RS13595	0.31	-0.1
3,076,341	-		PFLU_RS13595	0.31	-2.3
3,076,344	+		PFLU_RS13595	0.31	-1.0
3,076,344	+		PFLU_RS13595	0.31	+0.7
3,076,344	+		PFLU_RS13595	0.31	-1.4
3,076,344	+		PFLU_RS13595	0.31	+0.0
3,076,344	+		PFLU_RS13595	0.31	+0.6
3,076,344	+		PFLU_RS13595	0.31	+1.3
3,076,344	+		PFLU_RS13595	0.31	-1.8
3,076,344	+		PFLU_RS13595	0.31	-3.6
3,076,344	+		PFLU_RS13595	0.31	-0.4
3,076,344	+		PFLU_RS13595	0.31	-1.1
3,076,344	+		PFLU_RS13595	0.31	+1.3
3,076,344	+		PFLU_RS13595	0.31	+1.1
3,076,344	+		PFLU_RS13595	0.31	+2.1
3,076,344	+		PFLU_RS13595	0.31	-1.2
3,076,345	-		PFLU_RS13595	0.31	-0.7
3,076,345	-		PFLU_RS13595	0.31	+1.1
3,076,345	-		PFLU_RS13595	0.31	+2.6
3,076,345	-		PFLU_RS13595	0.31	-1.0
3,076,345	-		PFLU_RS13595	0.31	-1.3
3,076,345	-		PFLU_RS13595	0.31	-0.4
3,076,345	-		PFLU_RS13595	0.31	-0.5
3,076,345	-		PFLU_RS13595	0.31	+1.8
3,076,345	-		PFLU_RS13595	0.31	+0.5
3,076,345	-		PFLU_RS13595	0.31	-1.3
3,076,345	-		PFLU_RS13595	0.31	+1.3
3,076,345	-		PFLU_RS13595	0.31	-2.0
3,076,345	-		PFLU_RS13595	0.31	-2.1
3,076,345	-		PFLU_RS13595	0.31	+0.0
3,076,345	-		PFLU_RS13595	0.31	-2.0
3,076,405	+		PFLU_RS13595	0.38	+1.9
3,076,405	+		PFLU_RS13595	0.38	-3.3
3,076,406	-		PFLU_RS13595	0.38	+1.2
3,076,406	-		PFLU_RS13595	0.38	+3.2
3,076,550	+		PFLU_RS13595	0.53	-0.7
3,076,551	-		PFLU_RS13595	0.53	-0.7
3,076,564	+		PFLU_RS13595	0.54	-0.4
3,076,604	+		PFLU_RS13595	0.58	+0.4
3,076,631	+		PFLU_RS13595	0.61	-1.0
3,076,642	+		PFLU_RS13595	0.62	+0.5
3,076,642	+		PFLU_RS13595	0.62	-1.7
3,076,642	+		PFLU_RS13595	0.62	-0.3
3,076,642	+		PFLU_RS13595	0.62	-1.4
3,076,642	+		PFLU_RS13595	0.62	-1.0
3,076,642	+		PFLU_RS13595	0.62	+1.7
3,076,643	-		PFLU_RS13595	0.62	+0.9
3,076,643	-		PFLU_RS13595	0.62	+2.3
3,076,643	-		PFLU_RS13595	0.62	-1.3
3,076,643	-		PFLU_RS13595	0.62	+0.3
3,076,643	-		PFLU_RS13595	0.62	-0.9
3,076,990	+				-1.7
3,076,990	+				-0.7
3,076,990	+				+1.1
3,076,990	+				+2.2
3,076,991	-				-1.3
3,076,991	-				-0.8
3,076,991	-				-0.3
3,077,081	+				+1.9
3,077,081	+				-1.3
3,077,151	+				+0.4
3,077,151	+				+0.9
3,077,152	-				-0.8
3,077,152	-				-0.1
3,077,192	+				+0.0
3,077,192	+				+0.6
3,077,192	+				+1.9
3,077,299	+		PFLU_RS13600	0.10	-0.1
3,077,383	-		PFLU_RS13600	0.27	-1.1
3,077,390	+		PFLU_RS13600	0.28	+0.6
3,077,390	+		PFLU_RS13600	0.28	-0.3
3,077,443	+		PFLU_RS13600	0.38	+0.5
3,077,443	+		PFLU_RS13600	0.38	+0.1
3,077,443	+		PFLU_RS13600	0.38	+1.3
3,077,444	-		PFLU_RS13600	0.38	+1.3
3,077,444	-		PFLU_RS13600	0.38	-0.3
3,077,444	-		PFLU_RS13600	0.38	+0.1
3,077,444	-		PFLU_RS13600	0.38	+0.1
3,077,509	+		PFLU_RS13600	0.51	+0.5
3,077,510	-		PFLU_RS13600	0.51	+2.3
3,077,510	-		PFLU_RS13600	0.51	-0.7
3,077,711	+		PFLU_RS13600	0.90	-1.3
3,077,719	+				+2.1
3,077,719	+				+1.3
3,077,719	+				-0.3
3,077,719	+				+0.1
3,077,719	+				-0.3
3,077,719	+				+1.6
3,077,720	-				+1.5
3,077,720	-				+1.3
3,077,720	-				+1.1
3,077,720	-				+0.3
3,077,720	-				-2.3
3,077,720	-				-0.4
3,077,720	-				-1.5
3,077,735	-				+0.3
3,077,735	-				-0.1
3,077,735	-				-1.5
3,077,735	-				+0.8
3,077,735	-				-1.5
3,078,013	+		PFLU_RS13605	0.27	+1.8
3,078,101	+		PFLU_RS13605	0.37	+1.1
3,078,102	-		PFLU_RS13605	0.37	-0.1
3,078,176	+		PFLU_RS13605	0.45	+0.3
3,078,283	+		PFLU_RS13605	0.57	-2.8
3,078,283	+		PFLU_RS13605	0.57	-0.0
3,078,284	-		PFLU_RS13605	0.57	-1.3
3,078,553	+		PFLU_RS13605	0.86	-1.5
3,078,554	-		PFLU_RS13605	0.86	+1.2
3,078,554	-		PFLU_RS13605	0.86	+3.7
3,078,648	+				-1.1