Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07610

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,688,934	+		PFLU_RS07600	0.51	+1.0
1,688,934	+		PFLU_RS07600	0.51	+1.7
1,688,935	-		PFLU_RS07600	0.51	-2.2
1,688,935	-		PFLU_RS07600	0.51	-3.1
1,689,199	-		PFLU_RS07600	0.75	-0.1
1,689,220	-		PFLU_RS07600	0.77	-0.0
1,689,305	-		PFLU_RS07600	0.85	-0.9
1,689,360	+				-0.6
1,689,391	+				+1.1
1,689,391	+				-0.4
1,689,391	+				-1.7
1,689,391	+				-0.1
1,689,392	-				+2.1
1,689,392	-				+0.2
1,689,466	+				-2.3
1,689,467	-				-0.0
1,689,515	+				-2.0
1,689,515	+				+1.8
1,689,515	+				+0.3
1,689,515	+				-1.9
1,689,515	+				+1.7
1,689,515	+				-1.4
1,689,516	-				-1.7
1,689,516	-				-0.1
1,689,516	-				+2.3
1,689,516	-				-1.8
1,689,516	-				-0.9
1,689,516	-				-0.8
1,689,517	+				-1.0
1,689,517	+				-2.1
1,689,518	-				-1.1
1,689,528	-				-2.5
1,689,528	-				+0.9
1,689,531	+				-2.0
1,689,531	+				-0.2
1,689,531	+				+0.1
1,689,531	+				-2.4
1,689,531	+				+0.6
1,689,531	+				-1.6
1,689,531	+				+0.6
1,689,531	+				-1.1
1,689,532	-				+1.4
1,689,532	-				+1.0
1,689,532	-				+1.7
1,689,532	-				+0.1
1,689,532	-				-2.6
1,689,532	-				-2.5
1,689,532	-				+0.3
1,689,532	-				+0.2
1,689,532	-				-0.1
1,689,532	-				+1.0
1,689,532	-				+1.0
1,689,532	-				-0.8
1,689,532	-				-0.8
1,689,532	-				+0.8
1,689,532	-				+0.7
1,689,532	-				-0.5
1,689,532	-				+0.9
1,689,532	-				-0.8
1,689,532	-				-0.4
1,689,532	-				-0.0
1,689,532	-				-1.1
1,689,532	-				+0.0
1,689,577	+				-1.4
1,689,577	+				+0.6
1,689,578	-				-1.8
1,689,604	+				+1.7
1,689,604	+				+0.7
1,689,604	+				+0.9
1,689,604	+				+1.3
1,689,604	+				+0.7
1,689,604	+				-0.9
1,689,604	+				+1.3
1,689,604	+				-1.0
1,689,604	+				-3.3
1,689,605	-				+1.2
1,689,605	-				-0.8
1,689,605	-				-1.1
1,689,605	-				+1.0
1,689,605	-				+1.7
1,689,605	-				+2.0
1,689,940	+				+0.1
1,689,941	-				-1.4
1,689,941	-				+0.9
1,689,941	-				+0.3
1,689,941	-				-0.4
1,690,010	+		PFLU_RS07610	0.11	+1.1
1,690,011	-		PFLU_RS07610	0.11	+0.8
1,690,037	+		PFLU_RS07610	0.13	+1.1
1,690,190	+		PFLU_RS07610	0.24	+0.5
1,690,190	+		PFLU_RS07610	0.24	+1.2
1,690,190	+		PFLU_RS07610	0.24	-1.7
1,690,190	+		PFLU_RS07610	0.24	+1.5
1,690,190	+		PFLU_RS07610	0.24	-1.9
1,690,190	+		PFLU_RS07610	0.24	+0.7
1,690,190	+		PFLU_RS07610	0.24	-0.2
1,690,190	+		PFLU_RS07610	0.24	-0.9
1,690,190	+		PFLU_RS07610	0.24	-0.6
1,690,190	+		PFLU_RS07610	0.24	+1.3
1,690,191	-		PFLU_RS07610	0.24	-0.1
1,690,191	-		PFLU_RS07610	0.24	+1.3
1,690,191	-		PFLU_RS07610	0.24	+0.7
1,690,191	-		PFLU_RS07610	0.24	-0.6
1,690,191	-		PFLU_RS07610	0.24	+0.0
1,690,191	-		PFLU_RS07610	0.24	-1.7
1,690,191	-		PFLU_RS07610	0.24	-0.1
1,690,191	-		PFLU_RS07610	0.24	+0.7
1,690,247	+		PFLU_RS07610	0.28	+2.5
1,690,247	+		PFLU_RS07610	0.28	+0.9
1,690,247	+		PFLU_RS07610	0.28	-1.1
1,690,248	-		PFLU_RS07610	0.28	-1.4
1,690,248	-		PFLU_RS07610	0.28	-0.2
1,690,248	-		PFLU_RS07610	0.28	-1.1
1,690,355	+		PFLU_RS07610	0.36	+1.2
1,690,355	+		PFLU_RS07610	0.36	-0.3
1,690,447	+		PFLU_RS07610	0.43	+0.9
1,690,507	+		PFLU_RS07610	0.47	+0.9
1,690,508	-		PFLU_RS07610	0.47	+1.3
1,690,508	-		PFLU_RS07610	0.47	-0.9
1,690,508	-		PFLU_RS07610	0.47	+0.6
1,690,508	-		PFLU_RS07610	0.47	+1.4
1,690,508	-		PFLU_RS07610	0.47	-0.9
1,690,568	+		PFLU_RS07610	0.51	+2.0
1,690,568	+		PFLU_RS07610	0.51	-0.5
1,690,569	-		PFLU_RS07610	0.51	+0.2
1,690,682	+		PFLU_RS07610	0.59	+0.9
1,690,682	+		PFLU_RS07610	0.59	-0.6
1,690,682	+		PFLU_RS07610	0.59	+0.3
1,690,682	+		PFLU_RS07610	0.59	+1.1
1,690,682	+		PFLU_RS07610	0.59	-0.4
1,690,682	+		PFLU_RS07610	0.59	-1.1
1,690,682	+		PFLU_RS07610	0.59	-1.4
1,690,682	+		PFLU_RS07610	0.59	+0.7
1,690,683	-		PFLU_RS07610	0.59	-0.6
1,690,683	-		PFLU_RS07610	0.59	+1.1
1,690,683	-		PFLU_RS07610	0.59	+1.1
1,690,683	-		PFLU_RS07610	0.59	-1.1
1,690,683	-		PFLU_RS07610	0.59	-0.0
1,690,694	+		PFLU_RS07610	0.60	-0.3
1,690,694	+		PFLU_RS07610	0.60	-0.3
1,690,694	+		PFLU_RS07610	0.60	-2.1
1,690,694	+		PFLU_RS07610	0.60	+0.1
1,690,694	+		PFLU_RS07610	0.60	+1.4
1,690,694	+		PFLU_RS07610	0.60	+0.5
1,690,694	+		PFLU_RS07610	0.60	+0.1
1,690,694	+		PFLU_RS07610	0.60	+3.3
1,690,694	+		PFLU_RS07610	0.60	-0.5
1,690,694	+		PFLU_RS07610	0.60	-1.7
1,690,694	+		PFLU_RS07610	0.60	-1.8
1,690,694	+		PFLU_RS07610	0.60	-0.5
1,690,694	+		PFLU_RS07610	0.60	+1.5
1,690,694	+		PFLU_RS07610	0.60	+1.1
1,690,694	+		PFLU_RS07610	0.60	+1.0
1,690,694	+		PFLU_RS07610	0.60	+1.2
1,690,695	-		PFLU_RS07610	0.60	+1.4
1,690,695	-		PFLU_RS07610	0.60	+0.5
1,690,695	-		PFLU_RS07610	0.60	+1.0
1,690,695	-		PFLU_RS07610	0.60	+0.9
1,690,695	-		PFLU_RS07610	0.60	-1.0
1,690,695	-		PFLU_RS07610	0.60	+0.9
1,690,695	-		PFLU_RS07610	0.60	+0.7
1,690,695	-		PFLU_RS07610	0.60	-0.1
1,690,695	-		PFLU_RS07610	0.60	-0.8
1,690,695	-		PFLU_RS07610	0.60	+0.9
1,690,695	-		PFLU_RS07610	0.60	+0.6
1,690,695	-		PFLU_RS07610	0.60	+2.0
1,690,695	-		PFLU_RS07610	0.60	-0.9
1,690,695	-		PFLU_RS07610	0.60	+0.4
1,690,787	+		PFLU_RS07610	0.67	-0.9
1,690,787	+		PFLU_RS07610	0.67	+0.1
1,690,787	+		PFLU_RS07610	0.67	+3.0
1,690,787	+		PFLU_RS07610	0.67	-0.9
1,690,787	+		PFLU_RS07610	0.67	+0.7
1,690,787	+		PFLU_RS07610	0.67	+1.6
1,690,787	+		PFLU_RS07610	0.67	+0.5
1,690,787	+		PFLU_RS07610	0.67	-1.9
1,690,787	+		PFLU_RS07610	0.67	+2.3
1,690,787	+		PFLU_RS07610	0.67	-1.1
1,690,787	+		PFLU_RS07610	0.67	-1.3
1,690,788	-		PFLU_RS07610	0.67	-0.4
1,690,788	-		PFLU_RS07610	0.67	+1.0
1,690,788	-		PFLU_RS07610	0.67	+2.1
1,690,788	-		PFLU_RS07610	0.67	-0.5
1,690,788	-		PFLU_RS07610	0.67	-0.7
1,690,788	-		PFLU_RS07610	0.67	-0.3
1,690,788	-		PFLU_RS07610	0.67	+0.4
1,690,788	-		PFLU_RS07610	0.67	-0.2
1,690,788	-		PFLU_RS07610	0.67	+0.6
1,690,788	-		PFLU_RS07610	0.67	+0.7
1,690,788	-		PFLU_RS07610	0.67	-0.1
1,690,788	-		PFLU_RS07610	0.67	-0.6
1,690,788	-		PFLU_RS07610	0.67	+2.1
1,690,790	+		PFLU_RS07610	0.67	-1.1
1,690,790	+		PFLU_RS07610	0.67	-0.0
1,690,790	+		PFLU_RS07610	0.67	-1.6
1,690,790	+		PFLU_RS07610	0.67	-0.0
1,690,790	+		PFLU_RS07610	0.67	-0.5
1,690,790	+		PFLU_RS07610	0.67	+0.1
1,690,791	-		PFLU_RS07610	0.67	-0.6
1,690,791	-		PFLU_RS07610	0.67	-0.3
1,690,791	-		PFLU_RS07610	0.67	+0.5
1,690,791	-		PFLU_RS07610	0.67	-0.2
1,690,791	-		PFLU_RS07610	0.67	+1.5
1,690,791	-		PFLU_RS07610	0.67	+1.5
1,690,791	-		PFLU_RS07610	0.67	-1.2
1,690,791	-		PFLU_RS07610	0.67	-0.9
1,690,791	-		PFLU_RS07610	0.67	-2.5
1,690,791	-		PFLU_RS07610	0.67	+0.1
1,690,791	-		PFLU_RS07610	0.67	-0.4
1,690,791	-		PFLU_RS07610	0.67	+0.8
1,690,810	-		PFLU_RS07610	0.69	+0.7
1,690,832	+		PFLU_RS07610	0.70	-2.1
1,690,832	+		PFLU_RS07610	0.70	+0.2
1,690,833	-		PFLU_RS07610	0.70	+0.3
1,690,833	-		PFLU_RS07610	0.70	+1.6
1,690,833	-		PFLU_RS07610	0.70	-0.4
1,691,013	+		PFLU_RS07610	0.83	-1.4
1,691,045	+		PFLU_RS07610	0.85	+1.1
1,691,045	+		PFLU_RS07610	0.85	+1.1
1,691,045	+		PFLU_RS07610	0.85	+2.3
1,691,045	+		PFLU_RS07610	0.85	+1.0
1,691,045	+		PFLU_RS07610	0.85	-0.6
1,691,046	-		PFLU_RS07610	0.86	-0.6
1,691,046	-		PFLU_RS07610	0.86	-0.7
1,691,046	-		PFLU_RS07610	0.86	+0.1
1,691,046	-		PFLU_RS07610	0.86	-1.3
1,691,046	-		PFLU_RS07610	0.86	+1.0
1,691,046	-		PFLU_RS07610	0.86	+1.3
1,691,046	-		PFLU_RS07610	0.86	-0.5
1,691,077	+		PFLU_RS07610	0.88	+0.6
1,691,143	-				+0.7
1,691,249	+				-0.0
1,691,249	+				-2.0
1,691,249	+				-1.2
1,691,249	+				+0.9
1,691,249	+				+2.4
1,691,249	+				+1.0
1,691,249	+				+0.7
1,691,250	-				+1.7
1,691,250	-				-0.0
1,691,250	-				+0.1
1,691,250	-				+0.7
1,691,250	-				-1.7
1,691,250	-				-1.9
1,691,250	-				+1.1
1,691,250	-				-2.4
1,691,250	-				-0.0
1,691,250	-				-3.0
1,691,250	-				-0.2
1,691,262	+				-1.5
1,691,262	+				-0.6
1,691,262	+				-0.3
1,691,262	+				+0.9
1,691,262	+				-2.5
1,691,263	-				-1.6
1,691,263	-				-0.9
1,691,263	-				+0.1
1,691,263	-				+0.9
1,691,290	+				+1.2
1,691,291	-				+3.7
1,691,291	-				-0.4
1,691,336	+				-0.4
1,691,336	+				-2.0
1,691,337	-				-1.9
1,691,337	-				-0.0
1,691,337	-				-1.7
1,691,337	-				-0.4
1,691,358	+				+0.7
1,691,358	+				-2.0
1,691,359	-				-1.2
1,691,739	-		PFLU_RS07615	0.31	+0.7