Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26165

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
5,848,759	+		PFLU_RS26160	0.68	+2.6
5,848,760	-		PFLU_RS26160	0.68	+0.0
5,848,760	-		PFLU_RS26160	0.68	+0.5
5,848,760	-		PFLU_RS26160	0.68	+0.7
5,848,777	+		PFLU_RS26160	0.69	-0.5
5,848,777	+		PFLU_RS26160	0.69	+0.4
5,848,778	-		PFLU_RS26160	0.69	-1.8
5,848,778	-		PFLU_RS26160	0.69	-0.3
5,848,855	+		PFLU_RS26160	0.73	+0.2
5,848,855	+		PFLU_RS26160	0.73	+1.0
5,848,856	-		PFLU_RS26160	0.73	+1.7
5,849,078	+		PFLU_RS26160	0.85	+1.3
5,849,078	+		PFLU_RS26160	0.85	+0.4
5,849,079	-		PFLU_RS26160	0.85	+0.6
5,849,079	-		PFLU_RS26160	0.85	+1.1
5,849,290	+				+0.4
5,849,290	+				-0.8
5,849,291	-				+0.8
5,849,300	+				-0.7
5,849,300	+				+0.2
5,849,300	+				+0.3
5,849,300	+				+0.4
5,849,300	+				-1.7
5,849,300	+				+0.6
5,849,300	+				-0.2
5,849,300	+				+1.0
5,849,301	-				+0.2
5,849,301	-				-0.6
5,849,301	-				-2.4
5,849,301	-				+0.3
5,849,301	-				+0.2
5,849,301	-				+0.6
5,849,301	-				+1.3
5,849,301	-				+0.4
5,849,341	+				-2.6
5,849,341	+				+1.1
5,849,342	-				+2.3
5,849,342	-				-0.2
5,849,347	+				+0.7
5,849,347	+				+0.0
5,849,348	-				-0.6
5,849,348	-				+1.0
5,849,348	-				+0.7
5,849,348	-				-0.2
5,849,348	-				+0.3
5,849,416	+				+1.5
5,849,416	+				+2.3
5,849,416	+				+0.7
5,849,416	+				+1.2
5,849,416	+				-1.5
5,849,416	+				+1.0
5,849,416	+				-0.5
5,849,416	+				+0.6
5,849,416	+				+1.5
5,849,416	+				+0.4
5,849,416	+				-1.0
5,849,416	+				+1.0
5,849,416	+				-0.2
5,849,416	+				+2.8
5,849,420	+				-1.1
5,849,420	+				+0.2
5,849,421	-				+0.9
5,849,421	-				+0.8
5,849,421	-				-0.1
5,849,421	-				-0.2
5,849,421	-				+1.2
5,849,421	-				+1.1
5,849,437	-				+1.5
5,849,437	-				+1.2
5,849,437	-				+0.2
5,849,437	-				+0.6
5,849,437	-				+0.9
5,849,437	-				+0.6
5,849,437	-				-0.4
5,849,437	-				+1.8
5,849,437	-				-1.4
5,849,437	-				+0.3
5,849,437	-				-0.1
5,849,437	-				+0.8
5,849,437	-				+0.1
5,849,437	-				+0.5
5,849,437	-				+0.2
5,849,437	-				+0.8
5,849,437	-				+1.1
5,849,557	+				+0.3
5,849,557	+				-0.5
5,849,557	+				-0.3
5,849,557	+				-0.8
5,849,557	+				+0.9
5,849,557	+				-0.4
5,849,557	+				+2.4
5,849,557	+				+0.9
5,849,557	+				-0.0
5,849,557	+				+0.6
5,849,558	-				+0.2
5,849,558	-				+0.2
5,849,558	-				-0.7
5,849,558	-				+0.8
5,849,558	-				-0.0
5,849,558	-				+0.9
5,849,558	-				-0.2
5,849,558	-				-1.5
5,849,558	-				-0.8
5,849,568	+				+0.9
5,849,569	-				-0.2
5,849,593	+				-0.8
5,849,593	+				-1.1
5,849,594	-				+0.7
5,849,615	+				-0.1
5,849,669	+		PFLU_RS26165	0.20	+2.3
5,849,670	-		PFLU_RS26165	0.20	-0.6
5,849,670	-		PFLU_RS26165	0.20	+1.4
5,849,783	-		PFLU_RS26165	0.52	+0.5
5,849,801	-		PFLU_RS26165	0.57	-0.7
5,849,801	-		PFLU_RS26165	0.57	-0.8
5,849,869	+		PFLU_RS26165	0.76	+1.2
5,849,869	+		PFLU_RS26165	0.76	+1.1
5,849,869	+		PFLU_RS26165	0.76	+0.3
5,849,870	-		PFLU_RS26165	0.76	+1.1
5,849,870	-		PFLU_RS26165	0.76	-1.4
5,849,870	-		PFLU_RS26165	0.76	-2.4
5,849,942	-				+0.5
5,849,942	-				-0.9
5,849,942	-				-0.2
5,849,953	+				-1.1
5,849,953	+				+0.2
5,849,953	+				+0.1
5,849,953	+				-0.2
5,849,953	+				+0.8
5,849,953	+				-0.2
5,849,953	+				-0.0
5,849,954	-				+0.2
5,849,954	-				-0.2
5,849,954	-				+1.3
5,849,954	-				+0.5
5,849,981	+				+0.5
5,849,981	+				+1.7
5,849,981	+				-1.8
5,849,982	-				+0.7
5,849,982	-				+1.0
5,850,011	+				+0.5
5,850,012	-				+0.6
5,850,012	-				-1.4
5,850,012	-				-1.6
5,850,042	+				+0.7
5,850,042	+				-0.2
5,850,042	+				-2.5
5,850,170	+		PFLU_RS26170	0.29	-1.9
5,850,170	+		PFLU_RS26170	0.29	-0.8
5,850,170	+		PFLU_RS26170	0.29	+1.6
5,850,170	+		PFLU_RS26170	0.29	+0.4
5,850,170	+		PFLU_RS26170	0.29	+1.1
5,850,170	+		PFLU_RS26170	0.29	+0.6
5,850,170	+		PFLU_RS26170	0.29	-0.6
5,850,171	-		PFLU_RS26170	0.30	+1.5
5,850,171	-		PFLU_RS26170	0.30	-0.8
5,850,171	-		PFLU_RS26170	0.30	+0.3
5,850,171	-		PFLU_RS26170	0.30	+0.3
5,850,171	-		PFLU_RS26170	0.30	+1.4
5,850,197	-		PFLU_RS26170	0.35	+0.3
5,850,233	+		PFLU_RS26170	0.42	-1.0
5,850,233	+		PFLU_RS26170	0.42	-0.5
5,850,234	-		PFLU_RS26170	0.43	+0.3
5,850,512	+				-0.4
5,850,581	+				+0.3
5,850,581	+				-0.5
5,850,581	+				-1.0
5,850,581	+				+0.4
5,850,581	+				+0.3
5,850,581	+				-0.2
5,850,581	+				+0.2
5,850,581	+				-0.8
5,850,582	-				-0.0
5,850,582	-				-1.2
5,850,582	-				+0.3
5,850,582	-				-1.0
5,850,582	-				+0.3
5,850,582	-				+0.2
5,850,582	-				+0.6
5,850,582	-				-0.9
5,850,582	-				-0.2
5,850,582	-				+1.3
5,850,608	+				+1.3
5,850,609	-				+0.5
5,850,609	-				+1.1
5,850,609	-				+2.2
5,850,679	+		PFLU_RS26175	0.13	+0.1
5,850,783	+		PFLU_RS26175	0.20	+0.6
5,850,801	+		PFLU_RS26175	0.22	+0.2
5,850,801	+		PFLU_RS26175	0.22	-0.2
5,850,801	+		PFLU_RS26175	0.22	+0.8
5,850,801	+		PFLU_RS26175	0.22	+1.0
5,850,802	-		PFLU_RS26175	0.22	+0.6
5,850,802	-		PFLU_RS26175	0.22	+0.7
5,850,802	-		PFLU_RS26175	0.22	-0.5
5,850,934	-		PFLU_RS26175	0.32	-1.6