Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07615

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,690,447	+		PFLU_RS07610	0.43	+0.2
1,690,507	+		PFLU_RS07610	0.47	-1.0
1,690,508	-		PFLU_RS07610	0.47	+0.2
1,690,508	-		PFLU_RS07610	0.47	+0.6
1,690,508	-		PFLU_RS07610	0.47	+1.1
1,690,508	-		PFLU_RS07610	0.47	+0.7
1,690,508	-		PFLU_RS07610	0.47	-0.6
1,690,568	+		PFLU_RS07610	0.51	+0.4
1,690,568	+		PFLU_RS07610	0.51	+0.3
1,690,569	-		PFLU_RS07610	0.51	+1.1
1,690,682	+		PFLU_RS07610	0.59	-0.6
1,690,682	+		PFLU_RS07610	0.59	-1.7
1,690,682	+		PFLU_RS07610	0.59	+0.1
1,690,682	+		PFLU_RS07610	0.59	+1.0
1,690,682	+		PFLU_RS07610	0.59	+0.1
1,690,682	+		PFLU_RS07610	0.59	-0.2
1,690,682	+		PFLU_RS07610	0.59	-0.5
1,690,682	+		PFLU_RS07610	0.59	-0.6
1,690,683	-		PFLU_RS07610	0.59	+0.3
1,690,683	-		PFLU_RS07610	0.59	+0.1
1,690,683	-		PFLU_RS07610	0.59	+0.7
1,690,683	-		PFLU_RS07610	0.59	-0.2
1,690,683	-		PFLU_RS07610	0.59	+0.6
1,690,694	+		PFLU_RS07610	0.60	+0.3
1,690,694	+		PFLU_RS07610	0.60	-2.0
1,690,694	+		PFLU_RS07610	0.60	-2.2
1,690,694	+		PFLU_RS07610	0.60	-0.0
1,690,694	+		PFLU_RS07610	0.60	+0.2
1,690,694	+		PFLU_RS07610	0.60	-0.9
1,690,694	+		PFLU_RS07610	0.60	+0.6
1,690,694	+		PFLU_RS07610	0.60	+1.3
1,690,694	+		PFLU_RS07610	0.60	+1.1
1,690,694	+		PFLU_RS07610	0.60	-1.9
1,690,694	+		PFLU_RS07610	0.60	+0.5
1,690,694	+		PFLU_RS07610	0.60	+0.4
1,690,694	+		PFLU_RS07610	0.60	+1.3
1,690,694	+		PFLU_RS07610	0.60	-0.1
1,690,694	+		PFLU_RS07610	0.60	-0.2
1,690,694	+		PFLU_RS07610	0.60	+1.8
1,690,695	-		PFLU_RS07610	0.60	+0.3
1,690,695	-		PFLU_RS07610	0.60	-1.2
1,690,695	-		PFLU_RS07610	0.60	-0.7
1,690,695	-		PFLU_RS07610	0.60	+1.3
1,690,695	-		PFLU_RS07610	0.60	-0.5
1,690,695	-		PFLU_RS07610	0.60	-2.6
1,690,695	-		PFLU_RS07610	0.60	-0.5
1,690,695	-		PFLU_RS07610	0.60	+1.8
1,690,695	-		PFLU_RS07610	0.60	-0.6
1,690,695	-		PFLU_RS07610	0.60	+1.2
1,690,695	-		PFLU_RS07610	0.60	-1.3
1,690,695	-		PFLU_RS07610	0.60	-0.0
1,690,695	-		PFLU_RS07610	0.60	-0.6
1,690,695	-		PFLU_RS07610	0.60	-0.6
1,690,787	+		PFLU_RS07610	0.67	+0.5
1,690,787	+		PFLU_RS07610	0.67	-1.3
1,690,787	+		PFLU_RS07610	0.67	+2.6
1,690,787	+		PFLU_RS07610	0.67	-1.0
1,690,787	+		PFLU_RS07610	0.67	-0.3
1,690,787	+		PFLU_RS07610	0.67	+0.8
1,690,787	+		PFLU_RS07610	0.67	+0.6
1,690,787	+		PFLU_RS07610	0.67	-0.0
1,690,787	+		PFLU_RS07610	0.67	+0.9
1,690,787	+		PFLU_RS07610	0.67	+0.4
1,690,787	+		PFLU_RS07610	0.67	+0.5
1,690,788	-		PFLU_RS07610	0.67	-0.9
1,690,788	-		PFLU_RS07610	0.67	+0.4
1,690,788	-		PFLU_RS07610	0.67	+1.7
1,690,788	-		PFLU_RS07610	0.67	-0.6
1,690,788	-		PFLU_RS07610	0.67	-0.3
1,690,788	-		PFLU_RS07610	0.67	+0.8
1,690,788	-		PFLU_RS07610	0.67	-0.1
1,690,788	-		PFLU_RS07610	0.67	+0.8
1,690,788	-		PFLU_RS07610	0.67	+0.7
1,690,788	-		PFLU_RS07610	0.67	+1.3
1,690,788	-		PFLU_RS07610	0.67	+0.1
1,690,788	-		PFLU_RS07610	0.67	-0.7
1,690,788	-		PFLU_RS07610	0.67	-1.4
1,690,790	+		PFLU_RS07610	0.67	+1.4
1,690,790	+		PFLU_RS07610	0.67	-1.2
1,690,790	+		PFLU_RS07610	0.67	-1.7
1,690,790	+		PFLU_RS07610	0.67	-2.0
1,690,790	+		PFLU_RS07610	0.67	-0.6
1,690,790	+		PFLU_RS07610	0.67	-2.3
1,690,791	-		PFLU_RS07610	0.67	-0.2
1,690,791	-		PFLU_RS07610	0.67	-0.7
1,690,791	-		PFLU_RS07610	0.67	-0.0
1,690,791	-		PFLU_RS07610	0.67	-1.3
1,690,791	-		PFLU_RS07610	0.67	+0.6
1,690,791	-		PFLU_RS07610	0.67	+1.4
1,690,791	-		PFLU_RS07610	0.67	+0.8
1,690,791	-		PFLU_RS07610	0.67	-0.0
1,690,791	-		PFLU_RS07610	0.67	+0.7
1,690,791	-		PFLU_RS07610	0.67	-0.0
1,690,791	-		PFLU_RS07610	0.67	+0.9
1,690,791	-		PFLU_RS07610	0.67	-0.2
1,690,810	-		PFLU_RS07610	0.69	+0.6
1,690,832	+		PFLU_RS07610	0.70	+0.1
1,690,832	+		PFLU_RS07610	0.70	-1.5
1,690,833	-		PFLU_RS07610	0.70	-2.4
1,690,833	-		PFLU_RS07610	0.70	+1.1
1,690,833	-		PFLU_RS07610	0.70	-2.5
1,691,013	+		PFLU_RS07610	0.83	+0.4
1,691,045	+		PFLU_RS07610	0.85	+0.5
1,691,045	+		PFLU_RS07610	0.85	-1.4
1,691,045	+		PFLU_RS07610	0.85	+3.9
1,691,045	+		PFLU_RS07610	0.85	+1.0
1,691,045	+		PFLU_RS07610	0.85	+0.3
1,691,046	-		PFLU_RS07610	0.86	+0.5
1,691,046	-		PFLU_RS07610	0.86	-1.7
1,691,046	-		PFLU_RS07610	0.86	-0.6
1,691,046	-		PFLU_RS07610	0.86	-1.4
1,691,046	-		PFLU_RS07610	0.86	+0.6
1,691,046	-		PFLU_RS07610	0.86	-1.4
1,691,046	-		PFLU_RS07610	0.86	-2.7
1,691,077	+		PFLU_RS07610	0.88	+0.4
1,691,143	-				+1.3
1,691,249	+				-1.4
1,691,249	+				-0.9
1,691,249	+				+0.7
1,691,249	+				+1.7
1,691,249	+				+0.7
1,691,249	+				-1.1
1,691,249	+				+1.1
1,691,250	-				+0.2
1,691,250	-				-1.7
1,691,250	-				-0.4
1,691,250	-				-1.0
1,691,250	-				+0.7
1,691,250	-				-0.0
1,691,250	-				+0.2
1,691,250	-				-0.3
1,691,250	-				-0.2
1,691,250	-				+0.0
1,691,250	-				+0.3
1,691,262	+				-0.9
1,691,262	+				-0.7
1,691,262	+				-1.4
1,691,262	+				-0.6
1,691,262	+				+0.5
1,691,263	-				+0.3
1,691,263	-				-0.3
1,691,263	-				-0.9
1,691,263	-				-2.4
1,691,290	+				+1.5
1,691,291	-				+3.2
1,691,291	-				+1.0
1,691,336	+				+1.3
1,691,336	+				+0.9
1,691,337	-				+0.3
1,691,337	-				+0.1
1,691,337	-				+2.0
1,691,337	-				-1.9
1,691,358	+				+0.5
1,691,358	+				-1.1
1,691,359	-				-0.8
1,691,739	-		PFLU_RS07615	0.31	+0.6
1,692,528	+				+1.5
1,692,528	+				+0.7
1,692,529	-				-0.3
1,692,529	-				+1.0
1,692,539	-				+1.0
1,692,685	+				-1.2
1,692,685	+				-2.2
1,692,685	+				-1.6
1,692,685	+				+0.3
1,692,685	+				-2.4
1,692,685	+				-0.8
1,692,685	+				-2.9
1,692,686	-				-1.3
1,692,686	-				-0.8
1,692,686	-				-0.7
1,692,686	-				-1.5
1,692,686	-				+1.2
1,692,686	-				+0.8
1,692,740	+				-1.0
1,692,740	+				-0.3
1,692,740	+				-0.8
1,692,741	-				+0.5
1,692,741	-				-1.0
1,692,741	-				+0.6
1,692,780	+				+1.1
1,692,781	-				-1.0
1,692,781	-				-1.1
1,692,781	-				-0.6
1,692,781	-				-0.4
1,692,789	+				-0.7
1,692,789	+				+0.4
1,692,789	+				-1.0
1,692,790	-				+1.1
1,692,814	+				-1.7
1,692,814	+				+0.2
1,692,814	+				-0.4
1,692,814	+				-0.4
1,692,814	+				-1.0
1,692,814	+				-1.6
1,692,814	+				+0.2
1,692,814	+				-1.6
1,692,814	+				-1.9
1,692,814	+				-0.2
1,692,814	+				-0.2
1,692,815	-				+1.2
1,692,815	-				-0.2
1,692,815	-				-0.7
1,692,815	-				-0.7
1,692,815	-				-0.2
1,692,815	-				+1.0
1,692,815	-				-1.2
1,692,815	-				-1.6
1,692,867	-				-1.1
1,692,867	-				-2.1
1,692,902	+				-1.7
1,692,924	+				-1.7
1,692,924	+				-2.0
1,692,924	+				-0.2
1,692,924	+				+0.7
1,692,924	+				+1.6
1,692,924	+				+1.7
1,692,924	+				-1.4
1,692,924	+				-1.6
1,692,924	+				+2.3
1,692,924	+				+1.2
1,692,925	-				+1.6
1,692,925	-				-0.2
1,692,925	-				+0.3
1,692,925	-				-0.3
1,692,925	-				+1.2
1,692,925	-				-0.0
1,692,925	-				-1.2
1,692,925	-				+1.7
1,692,925	-				-2.9
1,692,929	-				-0.6
1,692,929	-				+0.2
1,692,944	+				-1.5
1,692,944	+				+0.7
1,692,944	+				+0.2
1,692,944	+				+0.2
1,692,944	+				+1.6
1,692,944	+				+0.7
1,692,944	+				-2.0
1,692,945	-				+0.7
1,692,945	-				-1.4
1,692,945	-				+0.7
1,692,974	+				+0.1
1,692,974	+				+1.1
1,692,974	+				+0.3
1,692,974	+				+1.2
1,692,974	+				-0.6
1,692,974	+				+0.7
1,692,974	+				+2.1
1,692,974	+				+0.7
1,692,975	-				-0.2
1,692,975	-				+1.0
1,692,975	-				-1.3
1,692,978	+				-1.0
1,692,978	+				+1.2
1,692,978	+				+0.6
1,692,978	+				-1.3
1,692,978	+				-0.3
1,692,978	+				+1.0
1,692,978	+				-0.6
1,692,978	+				-0.3
1,692,978	+				-0.2
1,692,978	+				-0.5
1,692,978	+				-1.8
1,692,978	+				+0.3
1,692,978	+				-0.4
1,692,978	+				-0.7
1,692,978	+				-0.1
1,692,978	+				+1.3
1,692,978	+				-1.4
1,692,978	+				+0.8
1,692,979	-				-0.0
1,692,979	-				-0.0
1,692,979	-				+0.0
1,692,979	-				-0.4
1,692,979	-				+3.2
1,692,979	-				+1.4
1,692,979	-				-0.3
1,692,979	-				-0.6
1,692,979	-				-2.7
1,692,979	-				-0.6
1,692,979	-				-0.7
1,692,979	-				+0.7
1,692,979	-				+1.0
1,692,979	-				-2.2
1,692,979	-				+0.1
1,692,979	-				-0.8
1,692,979	-				-2.0
1,692,979	-				-1.4
1,692,979	-				+0.3
1,692,979	-				-0.1
1,692,979	-				+0.3
1,692,979	-				+0.1
1,692,979	-				+0.4
1,692,979	-				-1.4
1,692,979	-				-1.8
1,692,979	-				+0.5
1,692,979	-				-1.7
1,692,979	-				-1.7
1,692,979	-				-2.1
1,692,979	-				+0.4
1,692,979	-				-2.2
1,692,982	+				+0.3
1,692,982	+				-1.6
1,692,982	+				-0.4
1,692,982	+				-0.0
1,692,982	+				+0.3
1,692,982	+				+0.7
1,692,982	+				-0.3
1,692,982	+				-2.0
1,692,982	+				-0.4
1,692,982	+				-1.8
1,692,982	+				+0.4
1,692,982	+				-0.3
1,692,982	+				-0.2
1,692,982	+				+0.6
1,692,982	+				-1.3
1,692,982	+				+0.4
1,692,982	+				+1.3
1,692,982	+				-0.6
1,692,982	+				+0.2
1,692,982	+				+0.7
1,692,982	+				-1.1
1,692,982	+				-1.2
1,692,982	+				+0.3
1,692,982	+				+1.0
1,692,982	+				+0.6
1,692,982	+				-0.7
1,692,982	+				-1.0
1,692,982	+				-1.3
1,692,982	+				-0.2
1,692,982	+				-1.2
1,692,982	+				-1.6
1,692,982	+				-1.4
1,692,982	+				-0.6
1,692,982	+				-0.1
1,692,983	-				-1.0
1,692,983	-				+0.6
1,692,983	-				+0.3
1,692,983	-				-1.3
1,692,983	-				+2.3
1,692,983	-				-0.4
1,692,983	-				-0.3
1,692,983	-				-1.1
1,692,983	-				+1.8
1,692,983	-				-1.5
1,692,983	-				+0.8
1,692,983	-				+1.9
1,692,983	-				-1.3
1,692,983	-				-0.4
1,692,983	-				-0.5
1,692,983	-				-1.1
1,692,983	-				-1.0
1,692,983	-				+0.7
1,692,983	-				+0.2
1,692,983	-				-1.4
1,692,983	-				-0.6
1,692,983	-				+0.3
1,692,983	-				-0.7
1,692,983	-				-1.2
1,692,983	-				-0.4
1,692,983	-				-2.4
1,692,983	-				+0.8
1,692,983	-				+0.1
1,692,983	-				+0.6
1,692,983	-				+0.6
1,692,983	-				-2.4
1,693,117	+				-0.7
1,693,120	+				-0.1
1,693,120	+				+0.4
1,693,120	+				+0.4
1,693,120	+				+1.3
1,693,120	+				-0.4
1,693,120	+				-1.0
1,693,120	+				-0.7
1,693,120	+				+1.2
1,693,120	+				+0.2
1,693,120	+				-0.3
1,693,121	-				-0.0
1,693,121	-				+1.4
1,693,121	-				+0.3
1,693,121	-				+0.3
1,693,121	-				+1.4
1,693,121	-				-0.7
1,693,259	+		PFLU_RS07625	0.14	-0.3
1,693,259	+		PFLU_RS07625	0.14	-0.8
1,693,259	+		PFLU_RS07625	0.14	+0.1
1,693,259	+		PFLU_RS07625	0.14	+0.4
1,693,260	-		PFLU_RS07625	0.14	-0.0
1,693,324	+		PFLU_RS07625	0.18	-0.9
1,693,324	+		PFLU_RS07625	0.18	+0.4
1,693,324	+		PFLU_RS07625	0.18	-1.7
1,693,324	+		PFLU_RS07625	0.18	+1.1
1,693,324	+		PFLU_RS07625	0.18	-0.2
1,693,324	+		PFLU_RS07625	0.18	-0.8
1,693,324	+		PFLU_RS07625	0.18	+1.2
1,693,324	+		PFLU_RS07625	0.18	-1.6
1,693,324	+		PFLU_RS07625	0.18	-0.4
1,693,324	+		PFLU_RS07625	0.18	-0.4
1,693,324	+		PFLU_RS07625	0.18	+0.9
1,693,324	+		PFLU_RS07625	0.18	+0.0
1,693,324	+		PFLU_RS07625	0.18	-0.4
1,693,324	+		PFLU_RS07625	0.18	+0.2
1,693,324	+		PFLU_RS07625	0.18	+0.3
1,693,324	+		PFLU_RS07625	0.18	+0.1
1,693,324	+		PFLU_RS07625	0.18	-0.4
1,693,324	+		PFLU_RS07625	0.18	+2.2
1,693,324	+		PFLU_RS07625	0.18	-0.1
1,693,324	+		PFLU_RS07625	0.18	+1.1
1,693,324	+		PFLU_RS07625	0.18	-0.0
1,693,324	+		PFLU_RS07625	0.18	-1.6
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1,693,325	-		PFLU_RS07625	0.18	+0.7
1,693,325	-		PFLU_RS07625	0.18	-0.9
1,693,325	-		PFLU_RS07625	0.18	+0.1
1,693,325	-		PFLU_RS07625	0.18	+1.0
1,693,325	-		PFLU_RS07625	0.18	-2.2
1,693,325	-		PFLU_RS07625	0.18	-1.2
1,693,325	-		PFLU_RS07625	0.18	+1.3
1,693,325	-		PFLU_RS07625	0.18	+1.0
1,693,325	-		PFLU_RS07625	0.18	-1.6
1,693,325	-		PFLU_RS07625	0.18	+0.3
1,693,325	-		PFLU_RS07625	0.18	+0.8
1,693,325	-		PFLU_RS07625	0.18	+0.8
1,693,325	-		PFLU_RS07625	0.18	-1.3
1,693,325	-		PFLU_RS07625	0.18	-1.7
1,693,325	-		PFLU_RS07625	0.18	-0.0
1,693,325	-		PFLU_RS07625	0.18	-1.6
1,693,325	-		PFLU_RS07625	0.18	-1.0
1,693,325	-		PFLU_RS07625	0.18	+0.3
1,693,325	-		PFLU_RS07625	0.18	-1.6
1,693,325	-		PFLU_RS07625	0.18	-0.9
1,693,325	-		PFLU_RS07625	0.18	-1.4
1,693,325	-		PFLU_RS07625	0.18	+1.7
1,693,325	-		PFLU_RS07625	0.18	+2.1
1,693,325	-		PFLU_RS07625	0.18	-1.2
1,693,325	-		PFLU_RS07625	0.18	-0.1
1,693,325	-		PFLU_RS07625	0.18	-1.1
1,693,325	-		PFLU_RS07625	0.18	+0.3
1,693,325	-		PFLU_RS07625	0.18	-0.1
1,693,328	+		PFLU_RS07625	0.18	-0.7
1,693,328	+		PFLU_RS07625	0.18	-0.6
1,693,329	-		PFLU_RS07625	0.18	+0.2
1,693,329	-		PFLU_RS07625	0.18	-1.3
1,693,329	-		PFLU_RS07625	0.18	-1.4
1,693,329	-		PFLU_RS07625	0.18	+0.1
1,693,329	-		PFLU_RS07625	0.18	+1.7
1,693,329	-		PFLU_RS07625	0.18	+1.1
1,693,329	-		PFLU_RS07625	0.18	+0.8
1,693,329	-		PFLU_RS07625	0.18	+1.5
1,693,329	-		PFLU_RS07625	0.18	+0.6
1,693,329	-		PFLU_RS07625	0.18	+1.2
1,693,346	+		PFLU_RS07625	0.19	-1.2
1,693,346	+		PFLU_RS07625	0.19	+1.6
1,693,346	+		PFLU_RS07625	0.19	+0.3
1,693,346	+		PFLU_RS07625	0.19	+0.3
1,693,346	+		PFLU_RS07625	0.19	+0.3
1,693,347	-		PFLU_RS07625	0.19	-0.1
1,693,508	-		PFLU_RS07625	0.28	+0.7