Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07635

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
1,696,165	-		PFLU_RS07630	0.59	+0.7
1,696,371	+		PFLU_RS07630	0.70	+0.1
1,696,371	+		PFLU_RS07630	0.70	+2.5
1,696,371	+		PFLU_RS07630	0.70	+1.8
1,696,371	+		PFLU_RS07630	0.70	+1.6
1,696,371	+		PFLU_RS07630	0.70	+1.4
1,696,372	-		PFLU_RS07630	0.70	+1.2
1,696,372	-		PFLU_RS07630	0.70	+2.1
1,696,372	-		PFLU_RS07630	0.70	+1.4
1,696,372	-		PFLU_RS07630	0.70	+1.7
1,696,515	+		PFLU_RS07630	0.77	+2.4
1,696,515	+		PFLU_RS07630	0.77	+2.8
1,696,515	+		PFLU_RS07630	0.77	+2.7
1,696,516	-		PFLU_RS07630	0.77	+1.7
1,696,516	-		PFLU_RS07630	0.77	+1.4
1,696,516	-		PFLU_RS07630	0.77	+2.6
1,696,516	-		PFLU_RS07630	0.77	+1.7
1,696,516	-		PFLU_RS07630	0.77	+1.6
1,696,596	+		PFLU_RS07630	0.82	+0.6
1,696,596	+		PFLU_RS07630	0.82	+1.1
1,696,596	+		PFLU_RS07630	0.82	+2.1
1,696,597	-		PFLU_RS07630	0.82	+0.6
1,696,597	-		PFLU_RS07630	0.82	+1.6
1,696,597	-		PFLU_RS07630	0.82	+2.1
1,696,599	+		PFLU_RS07630	0.82	+2.4
1,696,599	+		PFLU_RS07630	0.82	+0.5
1,696,599	+		PFLU_RS07630	0.82	+2.6
1,696,600	-		PFLU_RS07630	0.82	-0.4
1,696,600	-		PFLU_RS07630	0.82	+2.4
1,696,600	-		PFLU_RS07630	0.82	+2.9
1,696,752	+		PFLU_RS07630	0.90	+1.4
1,696,752	+		PFLU_RS07630	0.90	+1.3
1,696,752	+		PFLU_RS07630	0.90	+1.6
1,696,752	+		PFLU_RS07630	0.90	+2.7
1,696,753	-		PFLU_RS07630	0.90	+0.8
1,696,753	-		PFLU_RS07630	0.90	+0.4
1,696,762	-				+2.0
1,696,762	-				-0.8
1,696,797	+				+2.6
1,696,797	+				+1.9
1,696,797	+				+1.5
1,696,798	-				-0.1
1,696,798	-				+1.7
1,696,806	+				+1.0
1,696,806	+				+1.9
1,696,806	+				+1.6
1,696,806	+				+1.8
1,696,806	+				+1.2
1,696,806	+				+0.8
1,696,806	+				+1.0
1,696,806	+				+3.3
1,696,807	-				+0.1
1,696,807	-				+0.6
1,696,807	-				+2.1
1,696,807	-				+2.6
1,696,807	-				+0.6
1,696,807	-				-0.0
1,696,807	-				+3.0
1,696,807	-				+3.4
1,696,851	+				+1.1
1,696,851	+				+0.7
1,696,851	+				+1.3
1,696,851	+				+1.6
1,696,851	+				+0.6
1,696,851	+				+0.6
1,696,851	+				+1.1
1,696,852	-				+0.1
1,696,852	-				+0.1
1,696,852	-				+0.9
1,696,852	-				+1.7
1,696,852	-				+2.3
1,696,854	+				+1.9
1,696,854	+				+1.7
1,696,855	-				+1.6
1,696,855	-				+2.3
1,696,855	-				+2.4
1,696,925	+				+1.1
1,696,926	-				+2.0
1,696,926	-				+2.0
1,696,926	-				+2.6
1,696,979	+				+1.6
1,696,979	+				-0.9
1,696,979	+				-0.2
1,696,979	+				+0.9
1,696,979	+				+0.2
1,696,980	-				+1.9
1,696,980	-				+1.1
1,696,980	-				-0.5
1,696,980	-				+0.6
1,696,980	-				-0.8
1,696,980	-				+0.9
1,696,980	-				+0.4
1,697,010	+				-0.3
1,697,010	+				+1.6
1,697,010	+				+2.2
1,697,011	-				+0.8
1,697,011	-				+1.6
1,697,011	-				+0.2
1,697,015	+				-1.0
1,697,015	+				+0.8
1,697,015	+				+0.5
1,697,015	+				-0.3
1,697,081	+				+1.0
1,697,081	+				+1.2
1,697,082	-				-2.6
1,697,082	-				-2.5
1,697,082	-				+0.8
1,697,082	-				-0.8
1,697,134	+				-0.5
1,697,134	+				-2.8
1,697,134	+				-1.1
1,697,135	-				+1.6
1,697,135	-				+1.2
1,697,135	-				+0.8
1,697,135	-				+1.9
1,697,135	-				+2.1
1,697,135	-				+1.0
1,697,135	-				-0.8
1,697,135	-				-1.0
1,697,164	+				-0.8
1,697,164	+				-0.4
1,697,164	+				-1.0
1,697,165	-				+0.4
1,697,165	-				+1.9
1,697,209	+				-0.0
1,697,209	+				-0.9
1,697,209	+				-2.1
1,697,344	-				+2.0
1,697,344	-				-1.9
1,697,465	+		PFLU_RS07635	0.16	+0.3
1,697,465	+		PFLU_RS07635	0.16	-1.9
1,697,465	+		PFLU_RS07635	0.16	-0.8
1,697,466	-		PFLU_RS07635	0.16	+0.4
1,697,466	-		PFLU_RS07635	0.16	+0.8
1,697,466	-		PFLU_RS07635	0.16	+1.0
1,697,780	-		PFLU_RS07635	0.32	+0.3
1,697,780	-		PFLU_RS07635	0.32	-2.1
1,697,780	-		PFLU_RS07635	0.32	+1.7
1,697,867	+		PFLU_RS07635	0.37	+0.4
1,697,867	+		PFLU_RS07635	0.37	-2.1
1,697,868	-		PFLU_RS07635	0.37	-1.4
1,697,868	-		PFLU_RS07635	0.37	-2.0
1,697,868	-		PFLU_RS07635	0.37	+1.0
1,697,887	+		PFLU_RS07635	0.38	-0.4
1,697,887	+		PFLU_RS07635	0.38	-1.9
1,697,887	+		PFLU_RS07635	0.38	-1.1
1,697,887	+		PFLU_RS07635	0.38	+1.2
1,697,888	-		PFLU_RS07635	0.38	+0.8
1,698,009	+		PFLU_RS07635	0.44	+0.4
1,698,009	+		PFLU_RS07635	0.44	+0.3
1,698,009	+		PFLU_RS07635	0.44	+0.1
1,698,009	+		PFLU_RS07635	0.44	+1.4
1,698,009	+		PFLU_RS07635	0.44	-2.2
1,698,009	+		PFLU_RS07635	0.44	+0.4
1,698,009	+		PFLU_RS07635	0.44	-0.4
1,698,009	+		PFLU_RS07635	0.44	+2.4
1,698,009	+		PFLU_RS07635	0.44	-1.7
1,698,009	+		PFLU_RS07635	0.44	-2.8
1,698,009	+		PFLU_RS07635	0.44	-0.4
1,698,010	-		PFLU_RS07635	0.44	+1.2
1,698,010	-		PFLU_RS07635	0.44	+1.1
1,698,010	-		PFLU_RS07635	0.44	+0.1
1,698,010	-		PFLU_RS07635	0.44	+0.7
1,698,010	-		PFLU_RS07635	0.44	-2.5
1,698,010	-		PFLU_RS07635	0.44	-0.4
1,698,010	-		PFLU_RS07635	0.44	-0.1
1,698,010	-		PFLU_RS07635	0.44	-0.1
1,698,010	-		PFLU_RS07635	0.44	-1.0
1,698,010	-		PFLU_RS07635	0.44	+1.4
1,698,010	-		PFLU_RS07635	0.44	-2.0
1,698,010	-		PFLU_RS07635	0.44	+0.6
1,698,010	-		PFLU_RS07635	0.44	-0.6
1,698,314	+		PFLU_RS07635	0.60	-0.4
1,698,314	+		PFLU_RS07635	0.60	+0.4
1,698,315	-		PFLU_RS07635	0.60	-1.3
1,698,315	-		PFLU_RS07635	0.60	-1.3
1,698,315	-		PFLU_RS07635	0.60	+0.9
1,698,315	-		PFLU_RS07635	0.60	+0.8
1,698,315	-		PFLU_RS07635	0.60	+0.4
1,698,315	-		PFLU_RS07635	0.60	-1.7
1,698,425	+		PFLU_RS07635	0.66	+1.9
1,698,425	+		PFLU_RS07635	0.66	-0.4
1,698,464	-		PFLU_RS07635	0.68	+0.4
1,698,473	-		PFLU_RS07635	0.68	+1.9
1,698,546	+		PFLU_RS07635	0.72	-2.0
1,698,547	-		PFLU_RS07635	0.72	-2.4
1,698,713	+		PFLU_RS07635	0.81	-1.8
1,698,713	+		PFLU_RS07635	0.81	-0.5
1,698,713	+		PFLU_RS07635	0.81	-1.0
1,698,714	-		PFLU_RS07635	0.81	+1.1
1,698,714	-		PFLU_RS07635	0.81	-3.3
1,698,725	+		PFLU_RS07635	0.81	+1.6
1,698,881	+		PFLU_RS07635	0.89	+0.1
1,698,881	+		PFLU_RS07635	0.89	-1.0
1,698,881	+		PFLU_RS07635	0.89	-1.2
1,698,881	+		PFLU_RS07635	0.89	-1.8
1,698,881	+		PFLU_RS07635	0.89	-0.8
1,698,881	+		PFLU_RS07635	0.89	+0.7
1,698,881	+		PFLU_RS07635	0.89	+0.4
1,698,881	+		PFLU_RS07635	0.89	+0.9
1,698,882	-		PFLU_RS07635	0.89	-0.6
1,698,882	-		PFLU_RS07635	0.89	-0.8
1,698,882	-		PFLU_RS07635	0.89	-0.0
1,698,882	-		PFLU_RS07635	0.89	+2.0
1,698,882	-		PFLU_RS07635	0.89	-0.4
1,698,882	-		PFLU_RS07635	0.89	+0.3
1,698,980	+				-0.4
1,698,980	+				-1.8
1,698,980	+				-0.2
1,698,980	+				+0.0
1,698,981	-				+1.1
1,698,981	-				-2.8
1,698,981	-				-1.6
1,699,100	+				-0.2
1,699,100	+				-1.4
1,699,269	+				-1.2
1,699,269	+				-1.1
1,699,269	+				-1.1
1,699,269	+				-0.2
1,699,270	-				+0.2
1,699,270	-				-0.2
1,699,270	-				+1.1
1,699,270	-				+0.4
1,699,270	-				+0.1
1,699,322	+		PFLU_RS07640	0.12	-1.0
1,699,322	+		PFLU_RS07640	0.12	-0.9
1,699,322	+		PFLU_RS07640	0.12	-0.3
1,699,322	+		PFLU_RS07640	0.12	-0.1
1,699,322	+		PFLU_RS07640	0.12	-0.3
1,699,322	+		PFLU_RS07640	0.12	+0.6
1,699,322	+		PFLU_RS07640	0.12	-1.2
1,699,322	+		PFLU_RS07640	0.12	-0.4
1,699,322	+		PFLU_RS07640	0.12	-0.8
1,699,322	+		PFLU_RS07640	0.12	-1.1
1,699,322	+		PFLU_RS07640	0.12	+1.2
1,699,322	+		PFLU_RS07640	0.12	-0.7
1,699,322	+		PFLU_RS07640	0.12	-1.6
1,699,322	+		PFLU_RS07640	0.12	-1.3
1,699,322	+		PFLU_RS07640	0.12	-2.8
1,699,322	+		PFLU_RS07640	0.12	-0.4
1,699,322	+		PFLU_RS07640	0.12	-0.6
1,699,322	+		PFLU_RS07640	0.12	-2.0
1,699,322	+		PFLU_RS07640	0.12	-2.4
1,699,322	+		PFLU_RS07640	0.12	-0.5
1,699,322	+		PFLU_RS07640	0.12	-0.4
1,699,322	+		PFLU_RS07640	0.12	-0.8
1,699,322	+		PFLU_RS07640	0.12	-3.3
1,699,322	+		PFLU_RS07640	0.12	-2.5
1,699,322	+		PFLU_RS07640	0.12	-1.0
1,699,322	+		PFLU_RS07640	0.12	-2.1
1,699,322	+		PFLU_RS07640	0.12	-0.1
1,699,322	+		PFLU_RS07640	0.12	-1.6
1,699,322	+		PFLU_RS07640	0.12	-1.5
1,699,323	-		PFLU_RS07640	0.12	+0.2
1,699,323	-		PFLU_RS07640	0.12	-2.0
1,699,323	-		PFLU_RS07640	0.12	-1.9
1,699,323	-		PFLU_RS07640	0.12	-0.5
1,699,323	-		PFLU_RS07640	0.12	-1.8
1,699,323	-		PFLU_RS07640	0.12	-0.4
1,699,323	-		PFLU_RS07640	0.12	-2.7
1,699,323	-		PFLU_RS07640	0.12	-0.6
1,699,323	-		PFLU_RS07640	0.12	-1.1
1,699,323	-		PFLU_RS07640	0.12	-1.9
1,699,323	-		PFLU_RS07640	0.12	-0.7
1,699,323	-		PFLU_RS07640	0.12	-2.3
1,699,323	-		PFLU_RS07640	0.12	-1.6
1,699,323	-		PFLU_RS07640	0.12	-1.8
1,699,323	-		PFLU_RS07640	0.12	-0.6
1,699,323	-		PFLU_RS07640	0.12	-1.3
1,699,323	-		PFLU_RS07640	0.12	+0.1
1,699,323	-		PFLU_RS07640	0.12	+1.0
1,699,323	-		PFLU_RS07640	0.12	-0.8
1,699,323	-		PFLU_RS07640	0.12	+2.3
1,699,323	-		PFLU_RS07640	0.12	+1.6
1,699,323	-		PFLU_RS07640	0.12	-2.0
1,699,323	-		PFLU_RS07640	0.12	-2.3
1,699,323	-		PFLU_RS07640	0.12	-2.1
1,699,336	+		PFLU_RS07640	0.15	-1.0
1,699,347	-		PFLU_RS07640	0.18	-1.3
1,699,347	-		PFLU_RS07640	0.18	+1.1
1,699,443	+		PFLU_RS07640	0.40	-2.4
1,699,443	+		PFLU_RS07640	0.40	-1.4
1,699,443	+		PFLU_RS07640	0.40	-2.1
1,699,443	+		PFLU_RS07640	0.40	-2.1
1,699,444	-		PFLU_RS07640	0.40	-2.1
1,699,444	-		PFLU_RS07640	0.40	-1.8
1,699,444	-		PFLU_RS07640	0.40	-0.4
1,699,444	-		PFLU_RS07640	0.40	-0.9
1,699,444	-		PFLU_RS07640	0.40	-0.4
1,699,444	-		PFLU_RS07640	0.40	-0.8
1,699,480	-		PFLU_RS07640	0.48	-2.4
1,699,693	+				-1.8
1,699,693	+				-1.4
1,699,693	+				-0.9
1,699,693	+				+0.8
1,699,693	+				-2.1
1,699,693	+				-0.1
1,699,693	+				-1.4
1,699,693	+				-0.0
1,699,694	-				-3.4
1,699,694	-				-0.6
1,699,694	-				-3.0
1,699,694	-				-0.8
1,699,694	-				-0.4
1,699,694	-				-0.8
1,699,694	-				+1.6
1,699,694	-				+0.4
1,699,694	-				-3.8
1,699,701	+				-0.8
1,699,701	+				-1.7
1,699,702	-				+0.3
1,699,734	+				-1.3
1,699,734	+				+0.9
1,699,734	+				-3.3
1,699,735	-				+0.2
1,699,735	-				-1.5
1,699,735	-				-1.4
1,699,735	-				-0.3
1,699,735	-				+0.2
1,699,735	-				-0.0
1,699,743	+				-0.0
1,699,793	+				-2.4
1,699,793	+				-1.4
1,699,793	+				+1.6
1,699,793	+				-1.6
1,699,794	-				-2.8
1,699,794	-				-0.4
1,699,807	+				-0.4
1,699,807	+				+0.6
1,699,807	+				+2.6
1,699,807	+				-1.3
1,699,807	+				+1.1
1,699,808	-				-0.8
1,699,808	-				+1.5
1,699,808	-				-2.0
1,699,808	-				-0.3
1,699,808	-				+0.8
1,699,808	-				+2.6
1,699,808	-				-1.6
1,699,808	-				-0.8
1,699,813	+				-0.4
1,699,813	+				+0.3
1,699,813	+				-0.8
1,699,813	+				-1.3
1,699,813	+				-1.1
1,699,813	+				+1.3
1,699,813	+				+0.1
1,699,813	+				+0.9
1,699,813	+				-0.5
1,699,813	+				-0.3
1,699,813	+				-0.6
1,699,813	+				+0.1
1,699,813	+				+1.4
1,699,813	+				-0.8
1,699,813	+				-0.7
1,699,813	+				-0.9
1,699,813	+				+0.8
1,699,813	+				-0.0
1,699,813	+				+1.1
1,699,813	+				-1.6
1,699,813	+				-1.3
1,699,813	+				+0.3
1,699,813	+				+0.4
1,699,813	+				-0.4
1,699,813	+				+1.9
1,699,813	+				-1.1
1,699,813	+				+2.1
1,699,813	+				-0.4
1,699,813	+				+0.2
1,699,813	+				-0.2
1,699,813	+				-0.0
1,699,814	-				-1.1
1,699,814	-				-1.0
1,699,814	-				-1.4
1,699,814	-				-0.4
1,699,814	-				+1.8
1,699,814	-				-0.0
1,699,814	-				-1.7
1,699,814	-				-0.6
1,699,814	-				+1.7
1,699,814	-				-0.6
1,699,814	-				-0.6
1,699,814	-				-1.1
1,699,814	-				+0.3
1,699,814	-				+1.2
1,699,814	-				-1.8
1,699,814	-				-2.0
1,699,814	-				-1.3
1,699,814	-				+3.4
1,699,814	-				-0.2
1,699,814	-				-0.9
1,699,814	-				-1.3
1,699,814	-				+0.1
1,699,814	-				-0.4
1,699,814	-				-3.1
1,699,814	-				+1.1
1,699,814	-				+0.6
1,699,814	-				+0.2
1,699,814	-				-1.2
1,699,828	-				+0.1
1,699,912	+		PFLU_RS07645	0.22	+0.3
1,700,006	+		PFLU_RS07645	0.44	-0.0
1,700,006	+		PFLU_RS07645	0.44	-0.8
1,700,049	-		PFLU_RS07645	0.54	-1.9
1,700,049	-		PFLU_RS07645	0.54	-1.0
1,700,049	-		PFLU_RS07645	0.54	+1.6
1,700,049	-		PFLU_RS07645	0.54	+0.9