Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18715

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
4,232,012	+				-0.0
4,232,012	+				+1.0
4,232,012	+				+0.6
4,232,012	+				+0.1
4,232,012	+				+1.1
4,232,013	-				-1.8
4,232,013	-				-0.2
4,232,013	-				+0.8
4,232,013	-				+1.9
4,232,013	-				+1.4
4,232,013	-				+3.3
4,232,013	-				-0.8
4,232,014	+				-1.4
4,232,014	+				+0.7
4,232,014	+				+1.2
4,232,014	+				-0.7
4,232,014	+				-0.4
4,232,014	+				+0.3
4,232,015	-				-0.8
4,232,015	-				+1.1
4,232,015	-				+1.2
4,232,015	-				-0.8
4,232,015	-				-1.3
4,232,015	-				-0.3
4,232,015	-				+0.6
4,232,037	-				+1.0
4,232,080	+				-0.6
4,232,080	+				-1.6
4,232,081	-				-0.8
4,232,089	+				-2.1
4,232,089	+				-1.8
4,232,089	+				+0.4
4,232,090	-				-1.4
4,232,090	-				-2.2
4,232,090	-				-2.0
4,232,090	-				-2.4
4,232,090	-				-1.8
4,232,201	+				+1.6
4,232,201	+				-0.0
4,232,201	+				+0.6
4,232,202	-				+0.6
4,232,202	-				+0.8
4,232,202	-				+0.7
4,232,202	-				+0.9
4,232,202	-				-0.0
4,232,233	+				-0.1
4,232,233	+				-1.2
4,232,233	+				-2.8
4,232,233	+				-1.0
4,232,234	-				-0.6
4,232,234	-				+1.1
4,232,243	+				-1.8
4,232,315	+				+1.0
4,232,315	+				-0.3
4,232,315	+				-2.1
4,232,315	+				-0.8
4,232,315	+				+1.3
4,232,316	-				-0.4
4,232,473	+		PFLU_RS18710	0.28	+1.9
4,232,473	+		PFLU_RS18710	0.28	-0.2
4,232,474	-		PFLU_RS18710	0.29	-0.5
4,232,474	-		PFLU_RS18710	0.29	+0.8
4,232,571	+		PFLU_RS18710	0.47	+0.6
4,232,571	+		PFLU_RS18710	0.47	+0.5
4,232,571	+		PFLU_RS18710	0.47	-2.3
4,232,571	+		PFLU_RS18710	0.47	-2.7
4,232,571	+		PFLU_RS18710	0.47	+1.8
4,232,572	-		PFLU_RS18710	0.47	-1.2
4,232,572	-		PFLU_RS18710	0.47	-0.8
4,232,572	-		PFLU_RS18710	0.47	+1.2
4,232,572	-		PFLU_RS18710	0.47	-1.0
4,232,572	-		PFLU_RS18710	0.47	+2.4
4,232,572	-		PFLU_RS18710	0.47	+0.1
4,232,572	-		PFLU_RS18710	0.47	+2.1
4,232,572	-		PFLU_RS18710	0.47	-2.2
4,232,679	+		PFLU_RS18710	0.68	-0.0
4,232,680	-		PFLU_RS18710	0.68	+0.3
4,232,762	+		PFLU_RS18710	0.84	+0.4
4,232,762	+		PFLU_RS18710	0.84	-2.1
4,232,762	+		PFLU_RS18710	0.84	+1.9
4,232,762	+		PFLU_RS18710	0.84	-0.4
4,232,762	+		PFLU_RS18710	0.84	+0.8
4,232,762	+		PFLU_RS18710	0.84	+1.1
4,232,762	+		PFLU_RS18710	0.84	-1.8
4,232,762	+		PFLU_RS18710	0.84	-0.2
4,232,763	-		PFLU_RS18710	0.84	-0.0
4,232,763	-		PFLU_RS18710	0.84	+1.9
4,232,763	-		PFLU_RS18710	0.84	-0.4
4,232,763	-		PFLU_RS18710	0.84	-1.6
4,232,845	-				+0.6
4,232,867	+				+1.5
4,232,868	-				+1.6
4,232,877	+				-0.8
4,232,877	+				+0.8
4,232,877	+				-0.0
4,232,877	+				+2.1
4,232,878	-				+2.3
4,232,878	-				+0.5
4,232,878	-				-1.6
4,233,298	+		PFLU_RS18715	0.35	-1.2
4,233,298	+		PFLU_RS18715	0.35	+0.2
4,233,298	+		PFLU_RS18715	0.35	+0.4
4,233,298	+		PFLU_RS18715	0.35	+0.6
4,233,298	+		PFLU_RS18715	0.35	-0.1
4,233,298	+		PFLU_RS18715	0.35	+1.1
4,233,299	-		PFLU_RS18715	0.35	+0.6
4,233,299	-		PFLU_RS18715	0.35	-1.9
4,233,299	-		PFLU_RS18715	0.35	-0.8
4,233,299	-		PFLU_RS18715	0.35	-1.8
4,233,299	-		PFLU_RS18715	0.35	-0.3
4,233,299	-		PFLU_RS18715	0.35	-1.4
4,233,380	+		PFLU_RS18715	0.42	-2.4
4,233,380	+		PFLU_RS18715	0.42	-0.0
4,233,410	+		PFLU_RS18715	0.44	+1.4
4,233,672	+		PFLU_RS18715	0.68	+0.9
4,233,672	+		PFLU_RS18715	0.68	+0.9
4,233,672	+		PFLU_RS18715	0.68	+0.4
4,233,673	-		PFLU_RS18715	0.68	-1.3
4,233,673	-		PFLU_RS18715	0.68	+2.6
4,233,673	-		PFLU_RS18715	0.68	+0.7
4,233,673	-		PFLU_RS18715	0.68	+1.1
4,233,829	+		PFLU_RS18715	0.82	-1.0
4,233,830	-		PFLU_RS18715	0.82	+0.2
4,233,946	+				+0.6
4,233,947	-				-2.1
4,233,947	-				+0.9
4,233,972	+				-1.1
4,233,972	+				+0.1
4,233,972	+				+1.8
4,233,973	-				+1.6
4,233,973	-				+0.7
4,233,973	-				+1.0
4,234,007	+				-1.2
4,234,007	+				-0.2
4,234,007	+				-0.4
4,234,058	+				+0.6
4,234,096	+				+0.6
4,234,579	-		PFLU_RS18720	0.35	+2.7
4,234,650	+		PFLU_RS18720	0.40	+0.7
4,234,651	-		PFLU_RS18720	0.40	-0.4
4,234,651	-		PFLU_RS18720	0.40	+0.6
4,234,651	-		PFLU_RS18720	0.40	-2.0
4,234,958	+		PFLU_RS18720	0.62	+0.2
4,234,959	-		PFLU_RS18720	0.62	+0.1
4,234,959	-		PFLU_RS18720	0.62	+1.0
4,234,959	-		PFLU_RS18720	0.62	+0.6
4,234,959	-		PFLU_RS18720	0.62	-1.0
4,235,016	+		PFLU_RS18720	0.67	+0.9
4,235,016	+		PFLU_RS18720	0.67	+0.1
4,235,016	+		PFLU_RS18720	0.67	+1.0
4,235,016	+		PFLU_RS18720	0.67	-0.0
4,235,016	+		PFLU_RS18720	0.67	-1.2
4,235,016	+		PFLU_RS18720	0.67	+0.6
4,235,016	+		PFLU_RS18720	0.67	+0.0
4,235,016	+		PFLU_RS18720	0.67	-1.1
4,235,016	+		PFLU_RS18720	0.67	+3.1
4,235,016	+		PFLU_RS18720	0.67	+1.6
4,235,016	+		PFLU_RS18720	0.67	-1.4
4,235,016	+		PFLU_RS18720	0.67	-1.0
4,235,017	-		PFLU_RS18720	0.67	+0.6
4,235,017	-		PFLU_RS18720	0.67	-0.1
4,235,017	-		PFLU_RS18720	0.67	-2.1
4,235,017	-		PFLU_RS18720	0.67	-0.4
4,235,017	-		PFLU_RS18720	0.67	+1.4
4,235,017	-		PFLU_RS18720	0.67	+1.1
4,235,017	-		PFLU_RS18720	0.67	-1.9
4,235,017	-		PFLU_RS18720	0.67	-0.2
4,235,017	-		PFLU_RS18720	0.67	-2.5
4,235,017	-		PFLU_RS18720	0.67	+1.3
4,235,017	-		PFLU_RS18720	0.67	-1.7
4,235,017	-		PFLU_RS18720	0.67	+1.2