Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26955

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,010,379	+				+0.5
6,010,379	+				+0.3
6,010,379	+				+1.4
6,010,380	-				+0.2
6,010,380	-				+0.6
6,010,385	+				+0.1
6,010,385	+				+1.8
6,010,385	+				-1.9
6,010,385	+				-2.1
6,010,385	+				-0.8
6,010,385	+				+1.6
6,010,385	+				+0.4
6,010,385	+				+1.2
6,010,385	+				-1.2
6,010,385	+				+2.3
6,010,385	+				-0.8
6,010,385	+				-1.0
6,010,385	+				+0.6
6,010,385	+				+0.2
6,010,385	+				+0.5
6,010,385	+				-0.6
6,010,385	+				-0.4
6,010,385	+				+1.2
6,010,385	+				+1.8
6,010,385	+				+0.4
6,010,385	+				+0.5
6,010,385	+				-0.1
6,010,385	+				+0.1
6,010,385	+				-0.1
6,010,385	+				+0.8
6,010,385	+				+0.3
6,010,386	-				-1.6
6,010,386	-				-0.6
6,010,386	-				+0.6
6,010,386	-				+1.3
6,010,386	-				+1.2
6,010,386	-				-1.7
6,010,386	-				-0.0
6,010,386	-				-0.7
6,010,386	-				+0.0
6,010,386	-				-0.1
6,010,386	-				-1.2
6,010,386	-				-0.9
6,010,386	-				+0.6
6,010,386	-				-1.7
6,010,386	-				+0.1
6,010,386	-				-0.3
6,010,386	-				-1.0
6,010,386	-				-0.4
6,010,386	-				+0.4
6,010,386	-				-2.2
6,010,386	-				-0.4
6,010,386	-				-1.1
6,010,386	-				+0.8
6,010,386	-				+0.1
6,010,386	-				+0.9
6,010,386	-				+0.3
6,010,386	-				+0.8
6,010,386	-				-0.4
6,010,401	-				-1.1
6,010,455	+				-1.2
6,010,455	+				+0.0
6,010,456	-				-0.7
6,010,456	-				-0.2
6,010,467	+				-0.9
6,010,467	+				-0.9
6,010,467	+				-2.2
6,010,468	-				-2.6
6,010,468	-				-1.4
6,010,476	+				+0.4
6,010,722	+		PFLU_RS26950	0.32	-2.3
6,010,722	+		PFLU_RS26950	0.32	-1.0
6,010,722	+		PFLU_RS26950	0.32	-0.4
6,010,722	+		PFLU_RS26950	0.32	-0.4
6,010,722	+		PFLU_RS26950	0.32	-1.4
6,010,723	-		PFLU_RS26950	0.32	+0.0
6,010,723	-		PFLU_RS26950	0.32	-0.1
6,010,723	-		PFLU_RS26950	0.32	-1.0
6,010,723	-		PFLU_RS26950	0.32	-0.6
6,010,723	-		PFLU_RS26950	0.32	-2.8
6,010,723	-		PFLU_RS26950	0.32	+0.2
6,010,723	-		PFLU_RS26950	0.32	-0.8
6,010,723	-		PFLU_RS26950	0.32	+0.4
6,010,866	+		PFLU_RS26950	0.53	-0.0
6,010,866	+		PFLU_RS26950	0.53	-0.3
6,010,866	+		PFLU_RS26950	0.53	+0.6
6,010,866	+		PFLU_RS26950	0.53	+0.3
6,010,866	+		PFLU_RS26950	0.53	-2.8
6,010,867	-		PFLU_RS26950	0.53	-0.6
6,010,867	-		PFLU_RS26950	0.53	-1.6
6,010,867	-		PFLU_RS26950	0.53	-2.2
6,010,867	-		PFLU_RS26950	0.53	-0.1
6,010,869	+		PFLU_RS26950	0.53	-1.7
6,010,870	-		PFLU_RS26950	0.53	+0.1
6,010,902	+		PFLU_RS26950	0.58	+0.7
6,010,903	-		PFLU_RS26950	0.58	+1.2
6,010,903	-		PFLU_RS26950	0.58	+1.1
6,010,923	+		PFLU_RS26950	0.61	-0.2
6,010,923	+		PFLU_RS26950	0.61	-1.0
6,010,923	+		PFLU_RS26950	0.61	+0.1
6,010,923	+		PFLU_RS26950	0.61	-0.7
6,010,923	+		PFLU_RS26950	0.61	-0.8
6,010,923	+		PFLU_RS26950	0.61	-2.2
6,010,923	+		PFLU_RS26950	0.61	-1.0
6,010,923	+		PFLU_RS26950	0.61	-0.7
6,010,923	+		PFLU_RS26950	0.61	+0.2
6,010,923	+		PFLU_RS26950	0.61	-1.8
6,010,924	-		PFLU_RS26950	0.61	+1.3
6,010,924	-		PFLU_RS26950	0.61	+0.9
6,010,924	-		PFLU_RS26950	0.61	-1.3
6,010,924	-		PFLU_RS26950	0.61	+0.3
6,010,924	-		PFLU_RS26950	0.61	-0.0
6,010,935	+		PFLU_RS26950	0.63	-2.2
6,010,935	+		PFLU_RS26950	0.63	+0.3
6,010,935	+		PFLU_RS26950	0.63	-0.2
6,010,935	+		PFLU_RS26950	0.63	-1.9
6,010,935	+		PFLU_RS26950	0.63	-0.6
6,010,935	+		PFLU_RS26950	0.63	-0.9
6,010,935	+		PFLU_RS26950	0.63	-0.7
6,010,936	-		PFLU_RS26950	0.63	-0.4
6,010,936	-		PFLU_RS26950	0.63	-1.0
6,010,936	-		PFLU_RS26950	0.63	-0.2
6,011,031	+		PFLU_RS26950	0.76	-1.4
6,011,031	+		PFLU_RS26950	0.76	+0.2
6,011,031	+		PFLU_RS26950	0.76	-2.2
6,011,031	+		PFLU_RS26950	0.76	-0.8
6,011,031	+		PFLU_RS26950	0.76	-2.4
6,011,031	+		PFLU_RS26950	0.76	-1.0
6,011,031	+		PFLU_RS26950	0.76	-0.9
6,011,031	+		PFLU_RS26950	0.76	-0.2
6,011,032	-		PFLU_RS26950	0.77	-1.6
6,011,032	-		PFLU_RS26950	0.77	-0.7
6,011,032	-		PFLU_RS26950	0.77	-2.1
6,011,032	-		PFLU_RS26950	0.77	+0.5
6,011,032	-		PFLU_RS26950	0.77	+0.6
6,011,032	-		PFLU_RS26950	0.77	-0.7
6,011,032	-		PFLU_RS26950	0.77	-0.0
6,011,032	-		PFLU_RS26950	0.77	-2.3
6,011,032	-		PFLU_RS26950	0.77	-1.7
6,011,032	-		PFLU_RS26950	0.77	-0.8
6,011,032	-		PFLU_RS26950	0.77	-2.6
6,011,032	-		PFLU_RS26950	0.77	-1.4
6,011,032	-		PFLU_RS26950	0.77	+1.3
6,011,032	-		PFLU_RS26950	0.77	-0.1
6,011,032	-		PFLU_RS26950	0.77	-1.2
6,011,032	-		PFLU_RS26950	0.77	+0.8
6,011,032	-		PFLU_RS26950	0.77	-0.7
6,011,073	+		PFLU_RS26950	0.82	-0.6
6,011,073	+		PFLU_RS26950	0.82	-0.7
6,011,073	+		PFLU_RS26950	0.82	+0.2
6,011,074	-		PFLU_RS26950	0.83	+3.2
6,011,166	+				-1.2
6,011,166	+				-3.1
6,011,166	+				-1.0
6,011,166	+				-0.7
6,011,166	+				+2.3
6,011,166	+				-1.8
6,011,166	+				-0.1
6,011,166	+				+1.1
6,011,166	+				+0.2
6,011,166	+				-1.5
6,011,166	+				-1.1
6,011,166	+				-0.4
6,011,167	-				-0.6
6,011,167	-				+0.5
6,011,167	-				+0.0
6,011,167	-				+0.8
6,011,167	-				+0.4
6,011,167	-				-0.9
6,011,167	-				+0.2
6,011,184	+				+1.8
6,011,185	-				-1.2
6,011,271	+				+2.0
6,011,271	+				-0.7
6,011,271	+				+2.0
6,011,271	+				+0.3
6,011,271	+				-2.3
6,011,271	+				-1.0
6,011,271	+				+0.2
6,011,271	+				-1.6
6,011,271	+				+1.3
6,011,271	+				+0.8
6,011,271	+				-0.2
6,011,271	+				+0.9
6,011,271	+				+1.3
6,011,271	+				+0.2
6,011,271	+				+1.6
6,011,271	+				+0.3
6,011,271	+				-0.1
6,011,271	+				-0.5
6,011,271	+				-1.5
6,011,271	+				+1.0
6,011,271	+				+2.3
6,011,271	+				+0.2
6,011,272	-				+0.1
6,011,272	-				+1.1
6,011,272	-				+0.1
6,011,272	-				-0.2
6,011,272	-				+0.2
6,011,272	-				+0.2
6,011,272	-				-0.2
6,011,272	-				+0.2
6,011,272	-				+1.6
6,011,272	-				+0.8
6,011,272	-				+0.1
6,011,272	-				-1.4
6,011,272	-				+0.3
6,011,272	-				-1.3
6,011,272	-				-1.2
6,011,272	-				+1.0
6,011,272	-				+0.9
6,011,272	-				-0.0
6,011,333	+				+0.0
6,011,333	+				+2.5
6,011,333	+				+1.0
6,011,333	+				+0.7
6,011,333	+				+0.2
6,011,333	+				+0.0
6,011,333	+				-0.3
6,011,333	+				+1.8
6,011,333	+				+1.0
6,011,334	-				-0.9
6,011,334	-				-1.6
6,011,334	-				-1.1
6,011,334	-				-1.1
6,011,334	-				-0.4
6,011,334	-				-1.4
6,011,334	-				-1.9
6,011,364	-				+1.5
6,011,364	-				-0.4
6,011,535	+		PFLU_RS26955	0.21	-0.0
6,011,535	+		PFLU_RS26955	0.21	+2.0
6,011,535	+		PFLU_RS26955	0.21	+2.1
6,011,535	+		PFLU_RS26955	0.21	+1.4
6,011,535	+		PFLU_RS26955	0.21	-0.5
6,011,535	+		PFLU_RS26955	0.21	+1.3
6,011,535	+		PFLU_RS26955	0.21	+1.1
6,011,535	+		PFLU_RS26955	0.21	+2.5
6,011,535	+		PFLU_RS26955	0.21	+1.8
6,011,535	+		PFLU_RS26955	0.21	+2.0
6,011,535	+		PFLU_RS26955	0.21	+2.3
6,011,535	+		PFLU_RS26955	0.21	+2.2
6,011,536	-		PFLU_RS26955	0.21	+1.1
6,011,536	-		PFLU_RS26955	0.21	+0.4
6,011,536	-		PFLU_RS26955	0.21	+0.6
6,011,536	-		PFLU_RS26955	0.21	+2.4
6,011,536	-		PFLU_RS26955	0.21	+0.4
6,011,536	-		PFLU_RS26955	0.21	+1.0
6,011,597	+		PFLU_RS26955	0.28	+1.6
6,011,597	+		PFLU_RS26955	0.28	+1.3
6,011,598	-		PFLU_RS26955	0.28	+1.5
6,011,603	+		PFLU_RS26955	0.29	+1.9
6,011,603	+		PFLU_RS26955	0.29	+1.0
6,011,603	+		PFLU_RS26955	0.29	+1.4
6,011,603	+		PFLU_RS26955	0.29	+0.0
6,011,603	+		PFLU_RS26955	0.29	+1.1
6,011,603	+		PFLU_RS26955	0.29	+1.2
6,011,603	+		PFLU_RS26955	0.29	+2.6
6,011,604	-		PFLU_RS26955	0.29	-0.4
6,011,604	-		PFLU_RS26955	0.29	+1.3
6,011,604	-		PFLU_RS26955	0.29	+1.5
6,011,604	-		PFLU_RS26955	0.29	+1.2
6,011,604	-		PFLU_RS26955	0.29	+1.1
6,011,604	-		PFLU_RS26955	0.29	+1.6
6,011,604	-		PFLU_RS26955	0.29	+0.7
6,011,604	-		PFLU_RS26955	0.29	+1.8
6,011,604	-		PFLU_RS26955	0.29	+1.7
6,011,604	-		PFLU_RS26955	0.29	+0.6
6,011,604	-		PFLU_RS26955	0.29	+1.2
6,011,895	-		PFLU_RS26955	0.62	+1.3
6,011,895	-		PFLU_RS26955	0.62	+2.6
6,011,895	-		PFLU_RS26955	0.62	+0.8
6,011,928	-		PFLU_RS26955	0.65	+0.8
6,012,050	+		PFLU_RS26955	0.79	-1.2
6,012,050	+		PFLU_RS26955	0.79	+0.4
6,012,050	+		PFLU_RS26955	0.79	+1.4
6,012,050	+		PFLU_RS26955	0.79	+2.7
6,012,050	+		PFLU_RS26955	0.79	+0.6
6,012,050	+		PFLU_RS26955	0.79	-0.1
6,012,050	+		PFLU_RS26955	0.79	-1.0
6,012,050	+		PFLU_RS26955	0.79	+0.7
6,012,051	-		PFLU_RS26955	0.79	+1.7
6,012,051	-		PFLU_RS26955	0.79	-1.0
6,012,051	-		PFLU_RS26955	0.79	+1.2
6,012,051	-		PFLU_RS26955	0.79	+1.4
6,012,051	-		PFLU_RS26955	0.79	+1.7
6,012,053	+		PFLU_RS26955	0.79	+1.5
6,012,053	+		PFLU_RS26955	0.79	+1.3
6,012,053	+		PFLU_RS26955	0.79	+0.5
6,012,054	-		PFLU_RS26955	0.80	+2.0
6,012,214	+				+1.5
6,012,215	-				+1.3
6,012,215	-				+1.0
6,012,215	-				+0.2
6,012,215	-				+1.5
6,012,219	+				+0.9
6,012,219	+				+2.3
6,012,219	+				+0.6
6,012,219	+				+1.1
6,012,219	+				+1.0
6,012,219	+				+1.5
6,012,219	+				+1.7
6,012,219	+				+1.9
6,012,219	+				+0.9
6,012,219	+				+2.4
6,012,219	+				+1.4
6,012,219	+				+1.8
6,012,220	-				+0.9
6,012,220	-				+1.3
6,012,220	-				+1.8
6,012,220	-				+1.7
6,012,234	+				+0.8
6,012,234	+				+1.1
6,012,234	+				-1.4
6,012,234	+				+1.1
6,012,234	+				-0.2
6,012,235	-				+1.5
6,012,235	-				+0.2
6,012,235	-				-0.1
6,012,235	-				-0.3
6,012,277	+				+0.5
6,012,277	+				+0.2
6,012,277	+				-1.0
6,012,278	-				+1.2
6,012,278	-				-0.4
6,012,328	+				+1.0
6,012,611	+				+2.9
6,012,611	+				+0.2
6,012,634	+				+0.2
6,012,634	+				-1.4
6,012,634	+				+0.3
6,012,634	+				+1.1
6,012,634	+				+0.9
6,012,634	+				+0.8
6,012,634	+				+0.4
6,012,634	+				-2.3
6,012,634	+				+0.1
6,012,634	+				+0.2
6,012,635	-				+0.2
6,012,635	-				+1.0
6,012,635	-				+1.4
6,012,635	-				-0.7
6,012,635	-				+1.2
6,012,635	-				+0.2
6,012,635	-				+1.2
6,012,635	-				+0.3
6,012,635	-				+0.3
6,012,635	-				-0.2
6,012,635	-				+0.2
6,012,635	-				+0.1
6,012,635	-				+0.5
6,012,635	-				-0.1
6,012,635	-				+1.0
6,012,813	+		PFLU_RS26960	0.10	+0.8
6,012,814	-		PFLU_RS26960	0.10	+0.5
6,012,814	-		PFLU_RS26960	0.10	-1.5
6,012,814	-		PFLU_RS26960	0.10	+1.2
6,012,814	-		PFLU_RS26960	0.10	-1.6
6,012,814	-		PFLU_RS26960	0.10	+1.1
6,012,814	-		PFLU_RS26960	0.10	-0.2
6,012,841	+		PFLU_RS26960	0.11	-0.5
6,012,841	+		PFLU_RS26960	0.11	-0.1
6,012,841	+		PFLU_RS26960	0.11	+1.5
6,012,841	+		PFLU_RS26960	0.11	+1.0
6,012,841	+		PFLU_RS26960	0.11	+0.2
6,012,842	-		PFLU_RS26960	0.11	-1.4
6,012,842	-		PFLU_RS26960	0.11	-1.2
6,012,842	-		PFLU_RS26960	0.11	+0.2
6,012,842	-		PFLU_RS26960	0.11	-0.9
6,012,842	-		PFLU_RS26960	0.11	+2.5
6,012,842	-		PFLU_RS26960	0.11	-1.1
6,013,174	+		PFLU_RS26960	0.19	+1.0
6,013,174	+		PFLU_RS26960	0.19	+0.9
6,013,174	+		PFLU_RS26960	0.19	-0.6
6,013,175	-		PFLU_RS26960	0.19	-1.1
6,013,175	-		PFLU_RS26960	0.19	-0.0
6,013,175	-		PFLU_RS26960	0.19	+0.1
6,013,175	-		PFLU_RS26960	0.19	-0.6
6,013,175	-		PFLU_RS26960	0.19	+0.3
6,013,175	-		PFLU_RS26960	0.19	+1.1
6,013,175	-		PFLU_RS26960	0.19	-0.2