Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01320 and PFLU_RS01325 are separated by 284 nucleotides PFLU_RS01325 and PFLU_RS01330 are separated by 632 nucleotides
PFLU_RS01320: PFLU_RS01320 - phosphoenolpyruvate carboxykinase, at 292,644 to 294,185
_RS01320
PFLU_RS01325: PFLU_RS01325 - DUF1493 family protein, at 294,470 to 294,826
_RS01325
PFLU_RS01330: PFLU_RS01330 - putative adenosine monophosphate-protein transferase Fic, at 295,459 to 296,058
_RS01330
Position (kb) 294
295 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 293.526 kb on + strand, within PFLU_RS01320 at 293.526 kb on + strand, within PFLU_RS01320 at 293.526 kb on + strand, within PFLU_RS01320 at 293.526 kb on + strand, within PFLU_RS01320 at 293.527 kb on - strand, within PFLU_RS01320 at 293.527 kb on - strand, within PFLU_RS01320 at 293.656 kb on + strand, within PFLU_RS01320 at 293.657 kb on - strand, within PFLU_RS01320 at 293.697 kb on + strand, within PFLU_RS01320 at 293.697 kb on + strand, within PFLU_RS01320 at 293.697 kb on + strand, within PFLU_RS01320 at 293.697 kb on + strand, within PFLU_RS01320 at 293.698 kb on - strand, within PFLU_RS01320 at 293.821 kb on - strand, within PFLU_RS01320 at 293.868 kb on + strand, within PFLU_RS01320 at 293.869 kb on - strand, within PFLU_RS01320 at 293.869 kb on - strand, within PFLU_RS01320 at 293.869 kb on - strand, within PFLU_RS01320 at 294.062 kb on + strand at 294.062 kb on + strand at 294.062 kb on + strand at 294.063 kb on - strand at 294.063 kb on - strand at 294.063 kb on - strand at 294.063 kb on - strand at 294.063 kb on - strand at 294.176 kb on + strand at 294.176 kb on + strand at 294.177 kb on - strand at 294.177 kb on - strand at 294.177 kb on - strand at 294.177 kb on - strand at 294.177 kb on - strand at 294.177 kb on - strand at 294.177 kb on - strand at 294.183 kb on + strand at 294.183 kb on + strand at 294.183 kb on + strand at 294.183 kb on + strand at 294.183 kb on + strand at 294.183 kb on + strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.184 kb on - strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.302 kb on + strand at 294.303 kb on - strand at 294.303 kb on - strand at 294.303 kb on - strand at 294.303 kb on - strand at 294.303 kb on - strand at 294.303 kb on - strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.310 kb on + strand at 294.311 kb on - strand at 294.311 kb on - strand at 294.311 kb on - strand at 294.311 kb on - strand at 294.311 kb on - strand at 294.311 kb on - strand at 294.311 kb on - strand at 294.337 kb on - strand at 294.337 kb on - strand at 294.378 kb on + strand at 294.379 kb on - strand at 294.379 kb on - strand at 294.379 kb on - strand at 294.412 kb on - strand at 294.505 kb on + strand at 294.506 kb on - strand, within PFLU_RS01325 at 294.506 kb on - strand, within PFLU_RS01325 at 294.506 kb on - strand, within PFLU_RS01325 at 294.526 kb on - strand, within PFLU_RS01325 at 294.526 kb on - strand, within PFLU_RS01325 at 294.526 kb on - strand, within PFLU_RS01325 at 294.526 kb on - strand, within PFLU_RS01325 at 294.612 kb on + strand, within PFLU_RS01325 at 294.613 kb on - strand, within PFLU_RS01325 at 294.613 kb on - strand, within PFLU_RS01325 at 294.613 kb on - strand, within PFLU_RS01325 at 294.613 kb on - strand, within PFLU_RS01325 at 294.613 kb on - strand, within PFLU_RS01325 at 294.613 kb on - strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.618 kb on + strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.619 kb on - strand, within PFLU_RS01325 at 294.627 kb on + strand, within PFLU_RS01325 at 294.627 kb on + strand, within PFLU_RS01325 at 294.627 kb on + strand, within PFLU_RS01325 at 294.628 kb on - strand, within PFLU_RS01325 at 294.628 kb on - strand, within PFLU_RS01325 at 294.628 kb on - strand, within PFLU_RS01325 at 294.628 kb on - strand, within PFLU_RS01325 at 294.876 kb on + strand at 294.909 kb on + strand at 294.909 kb on + strand at 294.909 kb on + strand at 294.913 kb on + strand at 294.913 kb on + strand at 294.913 kb on + strand at 294.914 kb on - strand at 294.914 kb on - strand at 294.944 kb on + strand at 294.945 kb on - strand at 294.945 kb on - strand at 294.945 kb on - strand at 294.980 kb on + strand at 294.980 kb on + strand at 294.980 kb on + strand at 294.980 kb on + strand at 294.980 kb on + strand at 294.980 kb on + strand at 294.981 kb on - strand at 294.981 kb on - strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.995 kb on + strand at 294.996 kb on - strand at 294.996 kb on - strand at 294.996 kb on - strand at 294.996 kb on - strand at 294.996 kb on - strand at 294.996 kb on - strand at 295.055 kb on + strand at 295.056 kb on - strand at 295.056 kb on - strand at 295.098 kb on + strand at 295.098 kb on + strand at 295.098 kb on + strand at 295.098 kb on + strand at 295.098 kb on + strand at 295.098 kb on + strand at 295.099 kb on - strand at 295.099 kb on - strand at 295.099 kb on - strand at 295.099 kb on - strand at 295.126 kb on + strand at 295.127 kb on - strand at 295.127 kb on - strand at 295.127 kb on - strand at 295.127 kb on - strand at 295.181 kb on + strand at 295.181 kb on + strand at 295.181 kb on + strand at 295.181 kb on + strand at 295.182 kb on - strand at 295.182 kb on - strand at 295.182 kb on - strand at 295.182 kb on - strand at 295.182 kb on - strand at 295.182 kb on - strand at 295.210 kb on + strand at 295.211 kb on - strand at 295.275 kb on + strand at 295.275 kb on + strand at 295.275 kb on + strand at 295.276 kb on - strand at 295.276 kb on - strand at 295.276 kb on - strand at 295.304 kb on + strand at 295.304 kb on + strand at 295.304 kb on + strand at 295.304 kb on + strand at 295.304 kb on + strand at 295.368 kb on + strand at 295.368 kb on + strand at 295.369 kb on - strand at 295.369 kb on - strand at 295.369 kb on - strand at 295.387 kb on + strand at 295.387 kb on + strand at 295.388 kb on - strand at 295.412 kb on + strand at 295.412 kb on + strand at 295.412 kb on + strand at 295.412 kb on + strand at 295.412 kb on + strand at 295.412 kb on + strand at 295.413 kb on - strand at 295.413 kb on - strand at 295.537 kb on - strand, within PFLU_RS01330 at 295.615 kb on + strand, within PFLU_RS01330 at 295.615 kb on + strand, within PFLU_RS01330 at 295.616 kb on - strand, within PFLU_RS01330 at 295.616 kb on - strand, within PFLU_RS01330 at 295.676 kb on + strand, within PFLU_RS01330 at 295.676 kb on + strand, within PFLU_RS01330 at 295.677 kb on - strand, within PFLU_RS01330 at 295.724 kb on + strand, within PFLU_RS01330 at 295.724 kb on + strand, within PFLU_RS01330 at 295.724 kb on + strand, within PFLU_RS01330 at 295.724 kb on + strand, within PFLU_RS01330 at 295.724 kb on + strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330 at 295.725 kb on - strand, within PFLU_RS01330
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 293,526 + PFLU_RS01320 0.57 -0.7 293,526 + PFLU_RS01320 0.57 -0.8 293,526 + PFLU_RS01320 0.57 +0.3 293,526 + PFLU_RS01320 0.57 -1.5 293,527 - PFLU_RS01320 0.57 -2.0 293,527 - PFLU_RS01320 0.57 -1.4 293,656 + PFLU_RS01320 0.66 -1.4 293,657 - PFLU_RS01320 0.66 -0.8 293,697 + PFLU_RS01320 0.68 +0.9 293,697 + PFLU_RS01320 0.68 -0.3 293,697 + PFLU_RS01320 0.68 -2.3 293,697 + PFLU_RS01320 0.68 -0.9 293,698 - PFLU_RS01320 0.68 -3.3 293,821 - PFLU_RS01320 0.76 -1.7 293,868 + PFLU_RS01320 0.79 -1.7 293,869 - PFLU_RS01320 0.79 -0.7 293,869 - PFLU_RS01320 0.79 -2.9 293,869 - PFLU_RS01320 0.79 -0.3 294,062 + -0.1 294,062 + -1.0 294,062 + -2.9 294,063 - -1.4 294,063 - -0.3 294,063 - -1.6 294,063 - -1.1 294,063 - +0.3 294,176 + -0.6 294,176 + +0.9 294,177 - -1.2 294,177 - -1.6 294,177 - -3.4 294,177 - -0.1 294,177 - -1.5 294,177 - -0.4 294,177 - -2.4 294,183 + -0.6 294,183 + +0.1 294,183 + -0.4 294,183 + -2.1 294,183 + -0.3 294,183 + +0.4 294,184 - +0.4 294,184 - -2.2 294,184 - +0.3 294,184 - -2.8 294,184 - -0.3 294,184 - +0.7 294,184 - -1.3 294,184 - +0.3 294,184 - -2.4 294,184 - -0.9 294,302 + -0.3 294,302 + -0.4 294,302 + +1.0 294,302 + +1.4 294,302 + -0.2 294,302 + -1.0 294,302 + +0.1 294,302 + -0.3 294,302 + +0.4 294,303 - -2.0 294,303 - +1.1 294,303 - +0.7 294,303 - +0.1 294,303 - -1.9 294,303 - -0.9 294,310 + -0.3 294,310 + +0.1 294,310 + +0.3 294,310 + +0.4 294,310 + +0.4 294,310 + +0.6 294,310 + -2.9 294,310 + +1.0 294,310 + -0.2 294,310 + -1.2 294,310 + -0.7 294,310 + +1.2 294,310 + -1.2 294,310 + -2.6 294,310 + +0.4 294,311 - +0.6 294,311 - +0.4 294,311 - -0.5 294,311 - -0.2 294,311 - +0.3 294,311 - +1.4 294,311 - +0.0 294,337 - -0.1 294,337 - -0.2 294,378 + -0.0 294,379 - +0.4 294,379 - -0.9 294,379 - +0.9 294,412 - +1.0 294,505 + +0.9 294,506 - PFLU_RS01325 0.10 -3.3 294,506 - PFLU_RS01325 0.10 -1.8 294,506 - PFLU_RS01325 0.10 -0.2 294,526 - PFLU_RS01325 0.16 +0.7 294,526 - PFLU_RS01325 0.16 -1.7 294,526 - PFLU_RS01325 0.16 +0.8 294,526 - PFLU_RS01325 0.16 -0.1 294,612 + PFLU_RS01325 0.40 -2.4 294,613 - PFLU_RS01325 0.40 -1.0 294,613 - PFLU_RS01325 0.40 -0.3 294,613 - PFLU_RS01325 0.40 +0.8 294,613 - PFLU_RS01325 0.40 +1.5 294,613 - PFLU_RS01325 0.40 +0.9 294,613 - PFLU_RS01325 0.40 -0.6 294,618 + PFLU_RS01325 0.41 +0.4 294,618 + PFLU_RS01325 0.41 -0.8 294,618 + PFLU_RS01325 0.41 -0.4 294,618 + PFLU_RS01325 0.41 +0.9 294,618 + PFLU_RS01325 0.41 -0.9 294,618 + PFLU_RS01325 0.41 -0.0 294,618 + PFLU_RS01325 0.41 -0.4 294,618 + PFLU_RS01325 0.41 -2.0 294,618 + PFLU_RS01325 0.41 -0.6 294,618 + PFLU_RS01325 0.41 -0.6 294,618 + PFLU_RS01325 0.41 -1.4 294,618 + PFLU_RS01325 0.41 +1.5 294,618 + PFLU_RS01325 0.41 -0.9 294,618 + PFLU_RS01325 0.41 -1.1 294,618 + PFLU_RS01325 0.41 -0.8 294,618 + PFLU_RS01325 0.41 +0.7 294,618 + PFLU_RS01325 0.41 +0.8 294,618 + PFLU_RS01325 0.41 +0.7 294,618 + PFLU_RS01325 0.41 +1.6 294,619 - PFLU_RS01325 0.42 -0.2 294,619 - PFLU_RS01325 0.42 +0.5 294,619 - PFLU_RS01325 0.42 -0.7 294,619 - PFLU_RS01325 0.42 +1.9 294,619 - PFLU_RS01325 0.42 -0.9 294,619 - PFLU_RS01325 0.42 +1.1 294,619 - PFLU_RS01325 0.42 -1.1 294,619 - PFLU_RS01325 0.42 -0.3 294,619 - PFLU_RS01325 0.42 +1.2 294,619 - PFLU_RS01325 0.42 -1.3 294,619 - PFLU_RS01325 0.42 +0.9 294,619 - PFLU_RS01325 0.42 -0.6 294,627 + PFLU_RS01325 0.44 +1.9 294,627 + PFLU_RS01325 0.44 -1.0 294,627 + PFLU_RS01325 0.44 +1.2 294,628 - PFLU_RS01325 0.44 -1.2 294,628 - PFLU_RS01325 0.44 -2.0 294,628 - PFLU_RS01325 0.44 -0.3 294,628 - PFLU_RS01325 0.44 -0.0 294,876 + -0.4 294,909 + -0.9 294,909 + -1.3 294,909 + -1.0 294,913 + +0.4 294,913 + -0.6 294,913 + +0.9 294,914 - +1.4 294,914 - -0.6 294,944 + +0.1 294,945 - -0.6 294,945 - -0.1 294,945 - +0.9 294,980 + +0.4 294,980 + +0.9 294,980 + -0.7 294,980 + +1.0 294,980 + -1.5 294,980 + +0.8 294,981 - -0.6 294,981 - +1.6 294,995 + -3.0 294,995 + +0.8 294,995 + -0.7 294,995 + +0.1 294,995 + +0.9 294,995 + -1.0 294,995 + -0.8 294,995 + -0.7 294,996 - -2.0 294,996 - +0.9 294,996 - -0.0 294,996 - -0.6 294,996 - -0.4 294,996 - -0.2 295,055 + -0.6 295,056 - -2.5 295,056 - -1.7 295,098 + -0.7 295,098 + +0.8 295,098 + +1.5 295,098 + +0.5 295,098 + -0.5 295,098 + -0.6 295,099 - +1.8 295,099 - +0.0 295,099 - +0.9 295,099 - +1.4 295,126 + -1.7 295,127 - +1.9 295,127 - +0.3 295,127 - -1.6 295,127 - +0.7 295,181 + -0.4 295,181 + -0.3 295,181 + +0.8 295,181 + -0.7 295,182 - -1.2 295,182 - +0.6 295,182 - -1.4 295,182 - +0.4 295,182 - +0.5 295,182 - -0.9 295,210 + -0.2 295,211 - -0.8 295,275 + -1.0 295,275 + -1.8 295,275 + +0.6 295,276 - +0.2 295,276 - +1.5 295,276 - +1.2 295,304 + -1.4 295,304 + -0.7 295,304 + +0.4 295,304 + -1.7 295,304 + +1.3 295,368 + +2.0 295,368 + +1.6 295,369 - -0.1 295,369 - -0.2 295,369 - +0.4 295,387 + -0.9 295,387 + +0.2 295,388 - +1.4 295,412 + -2.2 295,412 + +0.4 295,412 + -2.4 295,412 + +0.6 295,412 + -2.6 295,412 + -0.8 295,413 - -1.1 295,413 - +0.4 295,537 - PFLU_RS01330 0.13 -1.7 295,615 + PFLU_RS01330 0.26 +1.5 295,615 + PFLU_RS01330 0.26 +0.7 295,616 - PFLU_RS01330 0.26 -0.5 295,616 - PFLU_RS01330 0.26 +0.7 295,676 + PFLU_RS01330 0.36 -1.6 295,676 + PFLU_RS01330 0.36 +0.4 295,677 - PFLU_RS01330 0.36 +0.6 295,724 + PFLU_RS01330 0.44 -2.6 295,724 + PFLU_RS01330 0.44 -0.6 295,724 + PFLU_RS01330 0.44 +1.0 295,724 + PFLU_RS01330 0.44 -0.3 295,724 + PFLU_RS01330 0.44 +1.0 295,725 - PFLU_RS01330 0.44 +0.4 295,725 - PFLU_RS01330 0.44 -0.9 295,725 - PFLU_RS01330 0.44 -1.1 295,725 - PFLU_RS01330 0.44 +1.6 295,725 - PFLU_RS01330 0.44 -0.0 295,725 - PFLU_RS01330 0.44 -3.3 295,725 - PFLU_RS01330 0.44 -0.8 295,725 - PFLU_RS01330 0.44 +1.3 295,725 - PFLU_RS01330 0.44 -1.1 295,725 - PFLU_RS01330 0.44 +0.6
Or see this region's nucleotide sequence