Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25965

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
5,799,232	+		PFLU_RS25960	0.29	-1.4
5,799,232	+		PFLU_RS25960	0.29	+0.0
5,799,232	+		PFLU_RS25960	0.29	-0.7
5,799,233	-		PFLU_RS25960	0.29	+1.6
5,799,233	-		PFLU_RS25960	0.29	-1.2
5,799,233	-		PFLU_RS25960	0.29	+0.3
5,799,233	-		PFLU_RS25960	0.29	+1.0
5,799,233	-		PFLU_RS25960	0.29	+0.3
5,799,245	+		PFLU_RS25960	0.30	-0.3
5,799,246	-		PFLU_RS25960	0.31	+2.0
5,799,246	-		PFLU_RS25960	0.31	-0.9
5,799,246	-		PFLU_RS25960	0.31	+0.5
5,799,298	-		PFLU_RS25960	0.35	-1.6
5,799,343	-		PFLU_RS25960	0.39	-0.1
5,799,343	-		PFLU_RS25960	0.39	-0.2
5,799,388	+		PFLU_RS25960	0.42	-1.6
5,799,388	+		PFLU_RS25960	0.42	-0.3
5,799,388	+		PFLU_RS25960	0.42	+0.4
5,799,388	+		PFLU_RS25960	0.42	+0.5
5,799,388	+		PFLU_RS25960	0.42	+0.6
5,799,389	-		PFLU_RS25960	0.42	+0.3
5,799,389	-		PFLU_RS25960	0.42	+0.4
5,799,389	-		PFLU_RS25960	0.42	+1.6
5,799,389	-		PFLU_RS25960	0.42	-0.4
5,799,444	-		PFLU_RS25960	0.47	+0.4
5,799,540	+		PFLU_RS25960	0.55	-0.3
5,799,540	+		PFLU_RS25960	0.55	+0.4
5,799,541	-		PFLU_RS25960	0.55	-0.9
5,799,544	+		PFLU_RS25960	0.55	+0.9
5,799,544	+		PFLU_RS25960	0.55	-1.3
5,799,544	+		PFLU_RS25960	0.55	+0.6
5,799,544	+		PFLU_RS25960	0.55	+0.7
5,799,544	+		PFLU_RS25960	0.55	+0.7
5,799,544	+		PFLU_RS25960	0.55	+2.4
5,799,544	+		PFLU_RS25960	0.55	-1.3
5,799,544	+		PFLU_RS25960	0.55	+0.1
5,799,545	-		PFLU_RS25960	0.55	+0.2
5,799,545	-		PFLU_RS25960	0.55	-1.0
5,799,545	-		PFLU_RS25960	0.55	+1.3
5,799,545	-		PFLU_RS25960	0.55	-0.7
5,799,545	-		PFLU_RS25960	0.55	-0.9
5,799,545	-		PFLU_RS25960	0.55	+0.2
5,799,545	-		PFLU_RS25960	0.55	-0.1
5,799,842	+		PFLU_RS25960	0.80	-0.4
5,799,854	+		PFLU_RS25960	0.81	-0.1
5,799,855	-		PFLU_RS25960	0.81	+0.3
5,799,920	+		PFLU_RS25960	0.86	+1.4
5,799,920	+		PFLU_RS25960	0.86	+0.6
5,799,920	+		PFLU_RS25960	0.86	-1.2
5,799,920	+		PFLU_RS25960	0.86	+1.0
5,799,920	+		PFLU_RS25960	0.86	+0.5
5,799,920	+		PFLU_RS25960	0.86	+0.3
5,799,920	+		PFLU_RS25960	0.86	+0.3
5,799,920	+		PFLU_RS25960	0.86	-0.6
5,799,920	+		PFLU_RS25960	0.86	+0.1
5,799,920	+		PFLU_RS25960	0.86	+0.7
5,799,920	+		PFLU_RS25960	0.86	+1.0
5,799,920	+		PFLU_RS25960	0.86	-1.9
5,799,920	+		PFLU_RS25960	0.86	-2.3
5,799,920	+		PFLU_RS25960	0.86	-0.1
5,799,920	+		PFLU_RS25960	0.86	+0.4
5,799,920	+		PFLU_RS25960	0.86	+1.0
5,799,920	+		PFLU_RS25960	0.86	-1.2
5,799,920	+		PFLU_RS25960	0.86	-0.1
5,799,920	+		PFLU_RS25960	0.86	+0.6
5,799,920	+		PFLU_RS25960	0.86	-0.0
5,799,920	+		PFLU_RS25960	0.86	-0.8
5,799,920	+		PFLU_RS25960	0.86	-0.3
5,799,921	-		PFLU_RS25960	0.86	+1.0
5,799,921	-		PFLU_RS25960	0.86	+0.2
5,799,921	-		PFLU_RS25960	0.86	-1.3
5,799,921	-		PFLU_RS25960	0.86	+1.2
5,799,921	-		PFLU_RS25960	0.86	+0.4
5,799,921	-		PFLU_RS25960	0.86	-1.9
5,799,921	-		PFLU_RS25960	0.86	-0.2
5,799,921	-		PFLU_RS25960	0.86	+0.4
5,799,921	-		PFLU_RS25960	0.86	-0.1
5,799,921	-		PFLU_RS25960	0.86	+0.2
5,799,921	-		PFLU_RS25960	0.86	-0.2
5,799,921	-		PFLU_RS25960	0.86	+1.6
5,799,921	-		PFLU_RS25960	0.86	+0.9
5,799,921	-		PFLU_RS25960	0.86	+0.9
5,799,921	-		PFLU_RS25960	0.86	+0.2
5,799,921	-		PFLU_RS25960	0.86	+0.1
5,799,921	-		PFLU_RS25960	0.86	-0.8
5,799,921	-		PFLU_RS25960	0.86	-0.4
5,799,921	-		PFLU_RS25960	0.86	-0.5
5,799,921	-		PFLU_RS25960	0.86	-0.3
5,799,921	-		PFLU_RS25960	0.86	-0.5
5,799,921	-		PFLU_RS25960	0.86	-3.0
5,799,921	-		PFLU_RS25960	0.86	+0.1
5,799,921	-		PFLU_RS25960	0.86	+0.4
5,799,981	-				+0.9
5,800,003	+				+1.1
5,800,004	-				-1.2
5,800,004	-				+0.3
5,800,004	-				-1.4
5,800,004	-				+0.5
5,800,120	+				+0.4
5,800,120	+				-0.9
5,800,121	-				-1.9
5,800,123	+				+0.0
5,800,123	+				+0.4
5,800,123	+				-0.2
5,800,123	+				-0.8
5,800,132	+				-1.0
5,800,132	+				+1.6
5,800,132	+				+0.3
5,800,132	+				-0.2
5,800,132	+				-1.1
5,800,132	+				+1.0
5,800,132	+				+1.2
5,800,133	-				-1.3
5,800,133	-				-0.2
5,800,133	-				+0.4
5,800,133	-				+0.4
5,800,133	-				+0.0
5,800,138	-				-0.2
5,800,138	-				-0.6
5,800,138	-				+0.6
5,800,148	+				+0.3
5,800,149	-				+0.5
5,800,163	+				+1.2
5,800,164	-				-1.0
5,800,187	+				+0.1
5,800,188	-				-1.7
5,800,188	-				-0.2
5,800,188	-				-0.8
5,800,188	-				-1.2
5,800,234	+				-1.0
5,800,235	-				-1.5
5,800,250	+				+0.3
5,800,250	+				-0.8
5,800,250	+				-0.3
5,800,250	+				+1.0
5,800,250	+				-0.2
5,800,250	+				-0.6
5,800,250	+				-0.3
5,800,250	+				+1.9
5,800,251	-				+0.3
5,800,251	-				-0.2
5,800,251	-				+0.2
5,800,254	+				+1.1
5,800,254	+				-0.3
5,800,254	+				+0.6
5,800,254	+				+3.0
5,800,254	+				+0.4
5,800,255	-				+0.5
5,800,289	+				+0.2
5,800,289	+				-0.6
5,800,290	-				+0.0
5,800,293	+		PFLU_RS25965	0.10	+0.3
5,800,293	+		PFLU_RS25965	0.10	+0.3
5,800,293	+		PFLU_RS25965	0.10	-0.5
5,800,293	+		PFLU_RS25965	0.10	+1.5
5,800,293	+		PFLU_RS25965	0.10	+0.7
5,800,293	+		PFLU_RS25965	0.10	+0.3
5,800,293	+		PFLU_RS25965	0.10	+0.8
5,800,293	+		PFLU_RS25965	0.10	-0.2
5,800,293	+		PFLU_RS25965	0.10	+1.5
5,800,293	+		PFLU_RS25965	0.10	-0.9
5,800,293	+		PFLU_RS25965	0.10	-1.7
5,800,293	+		PFLU_RS25965	0.10	+0.7
5,800,293	+		PFLU_RS25965	0.10	+1.6
5,800,293	+		PFLU_RS25965	0.10	-0.2
5,800,294	-		PFLU_RS25965	0.10	-0.2
5,800,294	-		PFLU_RS25965	0.10	+1.4
5,800,294	-		PFLU_RS25965	0.10	+0.1
5,800,294	-		PFLU_RS25965	0.10	-0.1
5,800,294	-		PFLU_RS25965	0.10	+0.3
5,800,294	-		PFLU_RS25965	0.10	+0.3
5,800,294	-		PFLU_RS25965	0.10	-1.6
5,800,294	-		PFLU_RS25965	0.10	+0.4
5,800,294	-		PFLU_RS25965	0.10	+0.4
5,800,294	-		PFLU_RS25965	0.10	+0.4
5,800,294	-		PFLU_RS25965	0.10	-2.2
5,800,294	-		PFLU_RS25965	0.10	+0.1
5,800,294	-		PFLU_RS25965	0.10	-0.8
5,800,294	-		PFLU_RS25965	0.10	+0.0
5,800,294	-		PFLU_RS25965	0.10	+0.7
5,800,294	-		PFLU_RS25965	0.10	-0.2
5,800,294	-		PFLU_RS25965	0.10	-0.0
5,800,294	-		PFLU_RS25965	0.10	-2.2
5,800,294	-		PFLU_RS25965	0.10	-0.6
5,800,294	-		PFLU_RS25965	0.10	+1.2
5,800,294	-		PFLU_RS25965	0.10	+0.3
5,800,317	+		PFLU_RS25965	0.14	+0.8
5,800,317	+		PFLU_RS25965	0.14	+0.8
5,800,317	+		PFLU_RS25965	0.14	+1.8
5,800,317	+		PFLU_RS25965	0.14	+0.6
5,800,317	+		PFLU_RS25965	0.14	-0.7
5,800,317	+		PFLU_RS25965	0.14	-2.8
5,800,318	-		PFLU_RS25965	0.14	+0.7
5,800,318	-		PFLU_RS25965	0.14	-0.2
5,800,318	-		PFLU_RS25965	0.14	+0.6
5,800,318	-		PFLU_RS25965	0.14	-1.3
5,800,318	-		PFLU_RS25965	0.14	+0.3
5,800,318	-		PFLU_RS25965	0.14	+0.4
5,800,318	-		PFLU_RS25965	0.14	-1.7
5,800,318	-		PFLU_RS25965	0.14	-0.8
5,800,318	-		PFLU_RS25965	0.14	+0.2
5,800,318	-		PFLU_RS25965	0.14	+0.9
5,800,318	-		PFLU_RS25965	0.14	-0.2
5,800,318	-		PFLU_RS25965	0.14	+1.5
5,800,318	-		PFLU_RS25965	0.14	-1.7
5,800,318	-		PFLU_RS25965	0.14	-0.0
5,800,318	-		PFLU_RS25965	0.14	+0.4
5,800,338	+		PFLU_RS25965	0.17	+0.1
5,800,338	+		PFLU_RS25965	0.17	+1.4
5,800,338	+		PFLU_RS25965	0.17	-0.2
5,800,338	+		PFLU_RS25965	0.17	+0.6
5,800,339	-		PFLU_RS25965	0.17	+0.6
5,800,339	-		PFLU_RS25965	0.17	+0.8
5,800,339	-		PFLU_RS25965	0.17	-0.3
5,800,350	+		PFLU_RS25965	0.18	-0.6
5,800,350	+		PFLU_RS25965	0.18	+0.7
5,800,351	-		PFLU_RS25965	0.19	-1.3
5,800,351	-		PFLU_RS25965	0.19	+0.8
5,800,360	+		PFLU_RS25965	0.20	+0.3
5,800,360	+		PFLU_RS25965	0.20	-0.6
5,800,360	+		PFLU_RS25965	0.20	+0.7
5,800,360	+		PFLU_RS25965	0.20	-0.2
5,800,360	+		PFLU_RS25965	0.20	-0.2
5,800,360	+		PFLU_RS25965	0.20	+0.3
5,800,360	+		PFLU_RS25965	0.20	+0.1
5,800,360	+		PFLU_RS25965	0.20	+0.5
5,800,360	+		PFLU_RS25965	0.20	+0.4
5,800,360	+		PFLU_RS25965	0.20	+0.3
5,800,360	+		PFLU_RS25965	0.20	+1.4
5,800,360	+		PFLU_RS25965	0.20	+2.3
5,800,360	+		PFLU_RS25965	0.20	+0.3
5,800,361	-		PFLU_RS25965	0.20	+1.4
5,800,361	-		PFLU_RS25965	0.20	+0.0
5,800,361	-		PFLU_RS25965	0.20	+0.0
5,800,361	-		PFLU_RS25965	0.20	+1.4
5,800,361	-		PFLU_RS25965	0.20	-0.2
5,800,361	-		PFLU_RS25965	0.20	+0.1
5,800,361	-		PFLU_RS25965	0.20	+0.1
5,800,368	+		PFLU_RS25965	0.21	+0.2
5,800,368	+		PFLU_RS25965	0.21	+0.8
5,800,368	+		PFLU_RS25965	0.21	+0.2
5,800,368	+		PFLU_RS25965	0.21	-0.4
5,800,368	+		PFLU_RS25965	0.21	+0.6
5,800,368	+		PFLU_RS25965	0.21	+0.3
5,800,369	-		PFLU_RS25965	0.21	-0.8
5,800,369	-		PFLU_RS25965	0.21	-0.6
5,800,369	-		PFLU_RS25965	0.21	-0.4
5,800,369	-		PFLU_RS25965	0.21	+0.3
5,800,369	-		PFLU_RS25965	0.21	+0.7
5,800,369	-		PFLU_RS25965	0.21	+0.4
5,800,369	-		PFLU_RS25965	0.21	-0.3
5,800,369	-		PFLU_RS25965	0.21	+1.3
5,800,423	+		PFLU_RS25965	0.29	+0.5
5,800,423	+		PFLU_RS25965	0.29	+0.2
5,800,423	+		PFLU_RS25965	0.29	-0.9
5,800,424	-		PFLU_RS25965	0.29	+0.3
5,800,452	+		PFLU_RS25965	0.33	-0.9
5,800,462	+		PFLU_RS25965	0.35	+0.7
5,800,462	+		PFLU_RS25965	0.35	+0.9
5,800,462	+		PFLU_RS25965	0.35	-0.4
5,800,462	+		PFLU_RS25965	0.35	-0.4
5,800,462	+		PFLU_RS25965	0.35	-0.2
5,800,462	+		PFLU_RS25965	0.35	-0.5
5,800,462	+		PFLU_RS25965	0.35	+0.5
5,800,463	-		PFLU_RS25965	0.35	+0.8
5,800,463	-		PFLU_RS25965	0.35	+0.5
5,800,463	-		PFLU_RS25965	0.35	-0.8
5,800,463	-		PFLU_RS25965	0.35	+0.7
5,800,463	-		PFLU_RS25965	0.35	+1.0
5,800,463	-		PFLU_RS25965	0.35	-0.4
5,800,476	+		PFLU_RS25965	0.37	-0.7
5,800,476	+		PFLU_RS25965	0.37	-0.6
5,800,477	-		PFLU_RS25965	0.37	+2.0
5,800,488	+		PFLU_RS25965	0.39	+1.8
5,800,489	-		PFLU_RS25965	0.39	-0.2
5,800,489	-		PFLU_RS25965	0.39	+0.4
5,800,510	+		PFLU_RS25965	0.42	-0.3
5,800,510	+		PFLU_RS25965	0.42	+0.1
5,800,510	+		PFLU_RS25965	0.42	+0.2
5,800,510	+		PFLU_RS25965	0.42	+1.1
5,800,510	+		PFLU_RS25965	0.42	+0.1
5,800,510	+		PFLU_RS25965	0.42	-0.6
5,800,510	+		PFLU_RS25965	0.42	+1.4
5,800,510	+		PFLU_RS25965	0.42	+1.3
5,800,510	+		PFLU_RS25965	0.42	+0.6
5,800,510	+		PFLU_RS25965	0.42	+0.3
5,800,510	+		PFLU_RS25965	0.42	+0.0
5,800,511	-		PFLU_RS25965	0.42	+0.8
5,800,511	-		PFLU_RS25965	0.42	+0.1
5,800,511	-		PFLU_RS25965	0.42	-0.3
5,800,511	-		PFLU_RS25965	0.42	+0.3
5,800,511	-		PFLU_RS25965	0.42	-1.5
5,800,511	-		PFLU_RS25965	0.42	-1.2
5,800,511	-		PFLU_RS25965	0.42	-0.2
5,800,511	-		PFLU_RS25965	0.42	+0.3
5,800,511	-		PFLU_RS25965	0.42	+0.4
5,800,511	-		PFLU_RS25965	0.42	+0.3
5,800,511	-		PFLU_RS25965	0.42	+0.5
5,800,666	+		PFLU_RS25965	0.65	+0.5
5,800,666	+		PFLU_RS25965	0.65	-0.3
5,800,666	+		PFLU_RS25965	0.65	+0.7
5,800,667	-		PFLU_RS25965	0.65	+3.0
5,800,667	-		PFLU_RS25965	0.65	+1.4
5,800,680	+		PFLU_RS25965	0.67	-0.6
5,800,680	+		PFLU_RS25965	0.67	+0.6
5,800,681	-		PFLU_RS25965	0.67	-0.8
5,800,681	-		PFLU_RS25965	0.67	-0.7
5,800,681	-		PFLU_RS25965	0.67	-0.5
5,800,681	-		PFLU_RS25965	0.67	-0.2
5,800,768	+		PFLU_RS25965	0.80	+1.0
5,800,768	+		PFLU_RS25965	0.80	+0.4
5,800,769	-		PFLU_RS25965	0.80	-0.8
5,800,871	-				+0.8
5,800,871	-				+0.8
5,800,917	-				+0.4
5,800,947	-				+1.9
5,800,972	+		PFLU_RS31110	0.12	-0.6
5,800,972	+		PFLU_RS31110	0.12	+0.6
5,800,972	+		PFLU_RS31110	0.12	+0.9
5,800,972	+		PFLU_RS31110	0.12	+1.4
5,800,973	-		PFLU_RS31110	0.12	-0.1
5,800,973	-		PFLU_RS31110	0.12	-1.7
5,800,999	+		PFLU_RS31110	0.17	+0.2
5,801,008	+		PFLU_RS31110	0.18	+1.1
5,801,008	+		PFLU_RS31110	0.18	+0.6
5,801,008	+		PFLU_RS31110	0.18	-0.9
5,801,008	+		PFLU_RS31110	0.18	+1.1
5,801,009	-		PFLU_RS31110	0.19	-0.2
5,801,009	-		PFLU_RS31110	0.19	+0.3
5,801,009	-		PFLU_RS31110	0.19	+0.0
5,801,009	-		PFLU_RS31110	0.19	-0.8
5,801,009	-		PFLU_RS31110	0.19	+0.2
5,801,046	+		PFLU_RS31110	0.25	+0.3
5,801,047	-		PFLU_RS31110	0.26	+0.0
5,801,163	+		PFLU_RS31110	0.47	-0.3
5,801,163	+		PFLU_RS31110	0.47	-0.6
5,801,163	+		PFLU_RS31110	0.47	+0.2
5,801,164	-		PFLU_RS31110	0.47	+0.9
5,801,283	+		PFLU_RS31110	0.68	-0.6
5,801,293	-		PFLU_RS31110	0.70	-0.6
5,801,361	-		PFLU_RS31110	0.82	+0.0
5,801,458	-				-0.1
5,801,458	-				-1.3
5,801,458	-				-0.3
5,801,458	-				+0.7
5,801,508	-				-0.9
5,801,508	-				-1.5
5,801,538	-				+1.2
5,801,538	-				-0.1
5,801,538	-				+0.3
5,801,538	-				-0.1
5,801,819	-		PFLU_RS25975	0.14	-1.0
5,801,825	+		PFLU_RS25975	0.15	+0.1
5,801,825	+		PFLU_RS25975	0.15	+1.0
5,801,825	+		PFLU_RS25975	0.15	-0.3
5,801,826	-		PFLU_RS25975	0.15	+0.5
5,801,826	-		PFLU_RS25975	0.15	+0.2
5,801,847	+		PFLU_RS25975	0.17	-0.2
5,801,847	+		PFLU_RS25975	0.17	+0.7
5,801,847	+		PFLU_RS25975	0.17	+0.3
5,801,847	+		PFLU_RS25975	0.17	+0.9
5,801,848	-		PFLU_RS25975	0.17	-0.2
5,801,848	-		PFLU_RS25975	0.17	-0.0
5,801,889	-		PFLU_RS25975	0.21	+0.1
5,801,903	+		PFLU_RS25975	0.23	-1.5
5,801,903	+		PFLU_RS25975	0.23	-0.6
5,801,903	+		PFLU_RS25975	0.23	+1.6
5,801,903	+		PFLU_RS25975	0.23	-0.0
5,801,903	+		PFLU_RS25975	0.23	+0.8
5,801,903	+		PFLU_RS25975	0.23	-2.7
5,801,903	+		PFLU_RS25975	0.23	+0.6
5,801,903	+		PFLU_RS25975	0.23	-0.9
5,801,903	+		PFLU_RS25975	0.23	-0.2
5,801,904	-		PFLU_RS25975	0.23	+0.4
5,801,904	-		PFLU_RS25975	0.23	+1.4
5,801,904	-		PFLU_RS25975	0.23	-2.1
5,801,904	-		PFLU_RS25975	0.23	-0.2
5,801,904	-		PFLU_RS25975	0.23	+0.8
5,801,904	-		PFLU_RS25975	0.23	+1.3
5,801,904	-		PFLU_RS25975	0.23	-2.0
5,801,904	-		PFLU_RS25975	0.23	-0.4
5,801,904	-		PFLU_RS25975	0.23	-1.1
5,801,904	-		PFLU_RS25975	0.23	+0.6
5,801,904	-		PFLU_RS25975	0.23	-0.1
5,801,904	-		PFLU_RS25975	0.23	-0.7