Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25940

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
5,791,504	-				+0.1
5,791,504	-				-0.2
5,791,504	-				-0.1
5,791,648	+				+0.5
5,791,648	+				-0.9
5,791,648	+				-1.1
5,791,648	+				+0.4
5,791,648	+				+2.7
5,791,648	+				+1.4
5,791,648	+				+0.1
5,791,648	+				+0.3
5,791,648	+				+1.1
5,791,648	+				+0.5
5,791,649	-				-0.9
5,791,649	-				+1.4
5,791,650	+				-0.2
5,791,650	+				-0.2
5,791,650	+				+0.8
5,791,650	+				-0.6
5,791,668	+				+0.4
5,791,778	+		PFLU_RS25935	0.24	+1.4
5,791,819	+		PFLU_RS25935	0.32	-1.2
5,791,819	+		PFLU_RS25935	0.32	-0.2
5,791,820	-		PFLU_RS25935	0.33	+1.4
5,792,161	-				+0.7
5,792,258	+				-1.5
5,792,258	+				+0.7
5,792,258	+				+0.1
5,792,258	+				-0.1
5,792,258	+				-0.2
5,792,258	+				+1.4
5,792,258	+				-0.2
5,792,258	+				-1.8
5,792,258	+				-0.4
5,792,258	+				+0.4
5,792,258	+				+0.2
5,792,259	-		PFLU_RS25940	0.10	-0.6
5,792,259	-		PFLU_RS25940	0.10	-1.4
5,792,259	-		PFLU_RS25940	0.10	+0.0
5,792,259	-		PFLU_RS25940	0.10	-0.6
5,792,259	-		PFLU_RS25940	0.10	-1.0
5,792,259	-		PFLU_RS25940	0.10	-1.1
5,792,259	-		PFLU_RS25940	0.10	+0.6
5,792,259	-		PFLU_RS25940	0.10	+0.0
5,792,259	-		PFLU_RS25940	0.10	-0.3
5,792,259	-		PFLU_RS25940	0.10	-1.0
5,792,259	-		PFLU_RS25940	0.10	-0.6
5,792,259	-		PFLU_RS25940	0.10	-0.3
5,792,259	-		PFLU_RS25940	0.10	+0.8
5,792,259	-		PFLU_RS25940	0.10	-0.0
5,792,259	-		PFLU_RS25940	0.10	+0.6
5,792,259	-		PFLU_RS25940	0.10	+0.6
5,792,259	-		PFLU_RS25940	0.10	+0.9
5,792,321	+		PFLU_RS25940	0.18	-0.8
5,792,321	+		PFLU_RS25940	0.18	-0.0
5,792,321	+		PFLU_RS25940	0.18	-0.9
5,792,321	+		PFLU_RS25940	0.18	+0.4
5,792,322	-		PFLU_RS25940	0.18	+0.6
5,792,375	+		PFLU_RS25940	0.25	+0.3
5,792,375	+		PFLU_RS25940	0.25	-0.5
5,792,375	+		PFLU_RS25940	0.25	-2.5
5,792,375	+		PFLU_RS25940	0.25	+1.3
5,792,375	+		PFLU_RS25940	0.25	-0.8
5,792,375	+		PFLU_RS25940	0.25	-0.6
5,792,375	+		PFLU_RS25940	0.25	-0.2
5,792,375	+		PFLU_RS25940	0.25	-1.4
5,792,375	+		PFLU_RS25940	0.25	+0.2
5,792,375	+		PFLU_RS25940	0.25	+1.7
5,792,375	+		PFLU_RS25940	0.25	+2.0
5,792,375	+		PFLU_RS25940	0.25	-0.3
5,792,375	+		PFLU_RS25940	0.25	+1.4
5,792,375	+		PFLU_RS25940	0.25	+0.6
5,792,375	+		PFLU_RS25940	0.25	-0.3
5,792,375	+		PFLU_RS25940	0.25	-0.5
5,792,375	+		PFLU_RS25940	0.25	+0.2
5,792,375	+		PFLU_RS25940	0.25	+0.3
5,792,375	+		PFLU_RS25940	0.25	+1.4
5,792,375	+		PFLU_RS25940	0.25	-1.6
5,792,375	+		PFLU_RS25940	0.25	-0.7
5,792,375	+		PFLU_RS25940	0.25	+1.2
5,792,375	+		PFLU_RS25940	0.25	-0.7
5,792,375	+		PFLU_RS25940	0.25	+2.1
5,792,375	+		PFLU_RS25940	0.25	+0.2
5,792,375	+		PFLU_RS25940	0.25	+0.7
5,792,375	+		PFLU_RS25940	0.25	+1.1
5,792,375	+		PFLU_RS25940	0.25	-0.5
5,792,375	+		PFLU_RS25940	0.25	-0.6
5,792,375	+		PFLU_RS25940	0.25	-0.6
5,792,376	-		PFLU_RS25940	0.25	-0.4
5,792,376	-		PFLU_RS25940	0.25	-0.5
5,792,376	-		PFLU_RS25940	0.25	-1.1
5,792,376	-		PFLU_RS25940	0.25	-1.7
5,792,376	-		PFLU_RS25940	0.25	+0.7
5,792,376	-		PFLU_RS25940	0.25	-0.0
5,792,376	-		PFLU_RS25940	0.25	-0.4
5,792,376	-		PFLU_RS25940	0.25	+2.4
5,792,376	-		PFLU_RS25940	0.25	+0.6
5,792,376	-		PFLU_RS25940	0.25	-0.5
5,792,376	-		PFLU_RS25940	0.25	+1.3
5,792,376	-		PFLU_RS25940	0.25	+1.4
5,792,376	-		PFLU_RS25940	0.25	-0.8
5,792,376	-		PFLU_RS25940	0.25	-0.9
5,792,376	-		PFLU_RS25940	0.25	-0.0
5,792,376	-		PFLU_RS25940	0.25	+0.4
5,792,376	-		PFLU_RS25940	0.25	+0.2
5,792,376	-		PFLU_RS25940	0.25	-1.7
5,792,376	-		PFLU_RS25940	0.25	-0.2
5,792,376	-		PFLU_RS25940	0.25	-0.1
5,792,376	-		PFLU_RS25940	0.25	+0.8
5,792,376	-		PFLU_RS25940	0.25	-0.2
5,792,376	-		PFLU_RS25940	0.25	-1.2
5,792,376	-		PFLU_RS25940	0.25	+0.2
5,792,403	+		PFLU_RS25940	0.29	+1.0
5,792,403	+		PFLU_RS25940	0.29	+0.3
5,792,537	+		PFLU_RS25940	0.46	-0.9
5,792,537	+		PFLU_RS25940	0.46	+0.3
5,792,537	+		PFLU_RS25940	0.46	-2.0
5,792,537	+		PFLU_RS25940	0.46	-0.4
5,792,537	+		PFLU_RS25940	0.46	-1.0
5,792,537	+		PFLU_RS25940	0.46	+0.9
5,792,538	-		PFLU_RS25940	0.46	-0.5
5,792,538	-		PFLU_RS25940	0.46	+0.9
5,792,538	-		PFLU_RS25940	0.46	-0.1
5,792,538	-		PFLU_RS25940	0.46	+1.1
5,792,538	-		PFLU_RS25940	0.46	-1.5
5,792,538	-		PFLU_RS25940	0.46	+0.0
5,792,568	+		PFLU_RS25940	0.50	+1.9
5,792,569	-		PFLU_RS25940	0.50	-1.7
5,792,569	-		PFLU_RS25940	0.50	-0.4
5,792,599	+		PFLU_RS25940	0.54	+0.8
5,792,600	-		PFLU_RS25940	0.54	-0.2
5,792,600	-		PFLU_RS25940	0.54	-0.1
5,792,600	-		PFLU_RS25940	0.54	-1.3
5,792,600	-		PFLU_RS25940	0.54	+1.2
5,792,609	+		PFLU_RS25940	0.56	+0.3
5,792,609	+		PFLU_RS25940	0.56	+0.8
5,792,609	+		PFLU_RS25940	0.56	+0.7
5,792,610	-		PFLU_RS25940	0.56	+0.8
5,792,612	+		PFLU_RS25940	0.56	+0.4
5,792,612	+		PFLU_RS25940	0.56	+0.8
5,792,612	+		PFLU_RS25940	0.56	+1.1
5,792,613	-		PFLU_RS25940	0.56	+0.3
5,792,613	-		PFLU_RS25940	0.56	+0.1
5,792,673	+		PFLU_RS25940	0.64	-1.0
5,792,673	+		PFLU_RS25940	0.64	+0.0
5,792,673	+		PFLU_RS25940	0.64	+0.1
5,792,732	+		PFLU_RS25940	0.72	+2.4
5,792,732	+		PFLU_RS25940	0.72	-1.1
5,792,732	+		PFLU_RS25940	0.72	+1.0
5,792,732	+		PFLU_RS25940	0.72	-0.6
5,792,732	+		PFLU_RS25940	0.72	-0.1
5,792,732	+		PFLU_RS25940	0.72	+0.1
5,792,732	+		PFLU_RS25940	0.72	+0.4
5,792,732	+		PFLU_RS25940	0.72	-0.0
5,792,732	+		PFLU_RS25940	0.72	+1.2
5,792,732	+		PFLU_RS25940	0.72	-0.2
5,792,732	+		PFLU_RS25940	0.72	+0.6
5,792,732	+		PFLU_RS25940	0.72	+0.4
5,792,732	+		PFLU_RS25940	0.72	-1.6
5,792,732	+		PFLU_RS25940	0.72	+0.4
5,792,732	+		PFLU_RS25940	0.72	+0.2
5,792,732	+		PFLU_RS25940	0.72	+1.2
5,792,732	+		PFLU_RS25940	0.72	-1.2
5,792,732	+		PFLU_RS25940	0.72	+0.2
5,792,732	+		PFLU_RS25940	0.72	-0.1
5,792,732	+		PFLU_RS25940	0.72	+0.4
5,792,733	-		PFLU_RS25940	0.72	-0.3
5,792,733	-		PFLU_RS25940	0.72	+0.4
5,792,733	-		PFLU_RS25940	0.72	-1.6
5,792,733	-		PFLU_RS25940	0.72	+0.8
5,792,733	-		PFLU_RS25940	0.72	-0.8
5,792,733	-		PFLU_RS25940	0.72	+1.0
5,792,733	-		PFLU_RS25940	0.72	-0.2
5,792,733	-		PFLU_RS25940	0.72	+0.8
5,792,733	-		PFLU_RS25940	0.72	-0.5
5,792,733	-		PFLU_RS25940	0.72	+0.6
5,792,733	-		PFLU_RS25940	0.72	+0.2
5,792,733	-		PFLU_RS25940	0.72	+0.4
5,792,733	-		PFLU_RS25940	0.72	-0.0
5,792,733	-		PFLU_RS25940	0.72	-2.0
5,792,733	-		PFLU_RS25940	0.72	-0.3
5,792,733	-		PFLU_RS25940	0.72	-0.0
5,792,733	-		PFLU_RS25940	0.72	-0.3
5,792,733	-		PFLU_RS25940	0.72	+0.2
5,792,733	-		PFLU_RS25940	0.72	-0.6
5,792,736	+		PFLU_RS25940	0.72	-0.9
5,792,736	+		PFLU_RS25940	0.72	+0.9
5,792,736	+		PFLU_RS25940	0.72	-0.5
5,792,736	+		PFLU_RS25940	0.72	-1.4
5,792,736	+		PFLU_RS25940	0.72	+1.8
5,792,736	+		PFLU_RS25940	0.72	+1.2
5,792,736	+		PFLU_RS25940	0.72	-0.3
5,792,736	+		PFLU_RS25940	0.72	-0.5
5,792,736	+		PFLU_RS25940	0.72	+1.2
5,792,736	+		PFLU_RS25940	0.72	+0.7
5,792,737	-		PFLU_RS25940	0.72	-0.7
5,792,737	-		PFLU_RS25940	0.72	+0.4
5,792,737	-		PFLU_RS25940	0.72	-1.4
5,792,737	-		PFLU_RS25940	0.72	+0.8
5,792,737	-		PFLU_RS25940	0.72	+1.0
5,792,737	-		PFLU_RS25940	0.72	+2.6
5,792,737	-		PFLU_RS25940	0.72	+0.1
5,792,737	-		PFLU_RS25940	0.72	+0.5
5,792,737	-		PFLU_RS25940	0.72	+0.8
5,792,737	-		PFLU_RS25940	0.72	+0.3
5,792,830	+		PFLU_RS25940	0.84	-0.6
5,792,830	+		PFLU_RS25940	0.84	+1.7
5,792,830	+		PFLU_RS25940	0.84	-0.4
5,792,830	+		PFLU_RS25940	0.84	-2.4
5,792,831	-		PFLU_RS25940	0.85	-1.4
5,792,831	-		PFLU_RS25940	0.85	+1.8
5,792,831	-		PFLU_RS25940	0.85	+0.4
5,792,949	+				+0.2
5,792,949	+				+0.5
5,792,949	+				-0.6
5,792,950	-				+0.8
5,792,950	-				+1.4
5,792,950	-				-0.2
5,792,989	+				-1.0
5,792,990	-				+0.1
5,793,000	-				-2.5
5,793,020	+				-0.4
5,793,020	+				+0.0
5,793,020	+				+0.9
5,793,020	+				+0.1
5,793,020	+				+0.4
5,793,020	+				-0.3
5,793,021	-				+0.5
5,793,021	-				+0.2
5,793,021	-				+1.3
5,793,040	-				+0.0
5,793,060	+				-1.7
5,793,060	+				-0.6
5,793,061	-				-0.2
5,793,068	+				-0.5
5,793,068	+				+0.7
5,793,068	+				-0.6
5,793,068	+				-0.0
5,793,068	+				-0.3
5,793,068	+				+0.7
5,793,068	+				+0.6
5,793,068	+				+0.6
5,793,068	+				+0.8
5,793,068	+				-0.5
5,793,068	+				-0.9
5,793,068	+				+0.9
5,793,068	+				-0.3
5,793,068	+				-1.5
5,793,069	-				-0.7
5,793,069	-				+0.5
5,793,069	-				-0.8
5,793,069	-				+0.5
5,793,069	-				-0.9
5,793,069	-				-0.5
5,793,119	+				-0.2
5,793,119	+				-1.0
5,793,120	-				-1.5
5,793,120	-				-1.8
5,793,120	-				-1.6
5,793,120	-				-1.4
5,793,124	+				-0.9
5,793,125	-				-0.6
5,793,199	+				-2.0
5,793,200	-				-1.7
5,793,200	-				-1.4
5,793,221	+				-1.6
5,793,221	+				-1.9
5,793,221	+				-0.4
5,793,221	+				-1.2
5,793,222	-				-3.6
5,793,276	+				-0.6
5,793,277	-				-2.0
5,793,277	-				-0.8
5,793,277	-				-2.4
5,793,277	-				-2.8
5,793,277	-				-4.2
5,793,277	-				-0.4
5,793,373	+		PFLU_RS25945	0.10	-3.3
5,793,373	+		PFLU_RS25945	0.10	+0.4
5,793,373	+		PFLU_RS25945	0.10	-0.2
5,793,373	+		PFLU_RS25945	0.10	-2.4
5,793,373	+		PFLU_RS25945	0.10	-2.0
5,793,373	+		PFLU_RS25945	0.10	-2.9
5,793,373	+		PFLU_RS25945	0.10	-2.8
5,793,373	+		PFLU_RS25945	0.10	-1.0
5,793,374	-		PFLU_RS25945	0.10	-3.4
5,793,374	-		PFLU_RS25945	0.10	-3.1
5,793,374	-		PFLU_RS25945	0.10	-2.5
5,793,436	+		PFLU_RS25945	0.14	-2.1
5,793,471	-		PFLU_RS25945	0.16	-2.4
5,793,471	-		PFLU_RS25945	0.16	-2.0
5,793,471	-		PFLU_RS25945	0.16	-1.4
5,793,662	+		PFLU_RS25945	0.27	-0.5
5,793,663	-		PFLU_RS25945	0.27	-3.0
5,793,663	-		PFLU_RS25945	0.27	-0.9
5,793,914	+		PFLU_RS25945	0.42	-1.7
5,793,914	+		PFLU_RS25945	0.42	-1.0
5,793,914	+		PFLU_RS25945	0.42	-0.9
5,793,914	+		PFLU_RS25945	0.42	-2.3
5,793,914	+		PFLU_RS25945	0.42	-0.3
5,793,915	-		PFLU_RS25945	0.42	-1.6
5,793,915	-		PFLU_RS25945	0.42	-3.3
5,793,915	-		PFLU_RS25945	0.42	-3.0
5,793,915	-		PFLU_RS25945	0.42	-2.7
5,793,915	-		PFLU_RS25945	0.42	-1.7
5,793,915	-		PFLU_RS25945	0.42	-1.9
5,793,915	-		PFLU_RS25945	0.42	-4.1