Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25210

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
5,631,409	+		PFLU_RS25200	0.28	+3.0
5,631,409	+		PFLU_RS25200	0.28	+4.2
5,631,410	-		PFLU_RS25200	0.29	+3.9
5,631,410	-		PFLU_RS25200	0.29	+0.9
5,631,410	-		PFLU_RS25200	0.29	+1.3
5,631,410	-		PFLU_RS25200	0.29	+3.9
5,631,410	-		PFLU_RS25200	0.29	+0.9
5,631,481	+		PFLU_RS25200	0.37	+2.3
5,631,481	+		PFLU_RS25200	0.37	+2.2
5,631,482	-		PFLU_RS25200	0.37	+4.5
5,631,511	+		PFLU_RS25200	0.40	+5.9
5,631,512	-		PFLU_RS25200	0.40	+3.5
5,631,575	+		PFLU_RS25200	0.47	+1.5
5,631,575	+		PFLU_RS25200	0.47	+1.9
5,631,576	-		PFLU_RS25200	0.47	+0.9
5,631,576	-		PFLU_RS25200	0.47	+2.3
5,631,576	-		PFLU_RS25200	0.47	+2.8
5,631,576	-		PFLU_RS25200	0.47	-0.3
5,631,576	-		PFLU_RS25200	0.47	+3.0
5,631,592	+		PFLU_RS25200	0.49	+3.8
5,631,592	+		PFLU_RS25200	0.49	+1.7
5,631,592	+		PFLU_RS25200	0.49	+3.9
5,631,592	+		PFLU_RS25200	0.49	+2.0
5,631,593	-		PFLU_RS25200	0.49	+0.9
5,631,593	-		PFLU_RS25200	0.49	+4.7
5,631,593	-		PFLU_RS25200	0.49	+3.1
5,631,593	-		PFLU_RS25200	0.49	+2.6
5,631,593	-		PFLU_RS25200	0.49	+1.9
5,631,593	-		PFLU_RS25200	0.49	+2.9
5,631,665	-		PFLU_RS25200	0.57	+1.9
5,631,674	-		PFLU_RS25200	0.58	+5.1
5,631,685	+		PFLU_RS25200	0.60	+3.3
5,631,685	+		PFLU_RS25200	0.60	-0.1
5,631,685	+		PFLU_RS25200	0.60	+1.2
5,631,685	+		PFLU_RS25200	0.60	+1.5
5,631,685	+		PFLU_RS25200	0.60	+1.1
5,631,685	+		PFLU_RS25200	0.60	+3.3
5,631,686	-		PFLU_RS25200	0.60	+3.6
5,631,686	-		PFLU_RS25200	0.60	+2.2
5,631,686	-		PFLU_RS25200	0.60	+0.9
5,631,686	-		PFLU_RS25200	0.60	+0.9
5,631,686	-		PFLU_RS25200	0.60	+1.9
5,631,686	-		PFLU_RS25200	0.60	+1.1
5,631,879	+		PFLU_RS25200	0.81	+4.1
5,631,879	+		PFLU_RS25200	0.81	+1.6
5,631,879	+		PFLU_RS25200	0.81	+2.4
5,631,879	+		PFLU_RS25200	0.81	+1.2
5,631,880	-		PFLU_RS25200	0.82	+2.1
5,631,880	-		PFLU_RS25200	0.82	+4.6
5,631,880	-		PFLU_RS25200	0.82	+2.3
5,631,880	-		PFLU_RS25200	0.82	+2.9
5,631,880	-		PFLU_RS25200	0.82	+0.3
5,631,880	-		PFLU_RS25200	0.82	+3.5
5,631,880	-		PFLU_RS25200	0.82	+5.2
5,631,895	-		PFLU_RS25200	0.83	+2.9
5,631,895	-		PFLU_RS25200	0.83	+1.9
5,631,895	-		PFLU_RS25200	0.83	+1.7
5,631,908	+		PFLU_RS25200	0.85	+2.5
5,631,909	-		PFLU_RS25200	0.85	+2.1
5,631,909	-		PFLU_RS25200	0.85	+2.9
5,632,051	+				+3.6
5,632,051	+				+4.1
5,632,051	+				+4.1
5,632,052	-				+3.4
5,632,075	+				+1.1
5,632,075	+				+2.4
5,632,075	+				+3.6
5,632,075	+				+2.9
5,632,075	+				+1.9
5,632,075	+				+1.9
5,632,075	+				+2.9
5,632,075	+				+1.1
5,632,076	-				+1.2
5,632,076	-				+2.3
5,632,076	-				+1.7
5,632,076	-				+2.4
5,632,076	-				+3.1
5,632,076	-				+3.6
5,632,076	-				+0.3
5,632,124	+		PFLU_RS25205	0.20	+1.9
5,632,124	+		PFLU_RS25205	0.20	+4.1
5,632,124	+		PFLU_RS25205	0.20	+2.9
5,632,125	-		PFLU_RS25205	0.20	+1.9
5,632,125	-		PFLU_RS25205	0.20	+4.7
5,632,127	+		PFLU_RS25205	0.21	+3.5
5,632,128	-		PFLU_RS25205	0.21	+0.7
5,632,128	-		PFLU_RS25205	0.21	+1.7
5,632,128	-		PFLU_RS25205	0.21	+1.9
5,632,128	-		PFLU_RS25205	0.21	+2.7
5,632,171	+		PFLU_RS25205	0.34	+2.2
5,632,195	-		PFLU_RS25205	0.41	+2.2
5,632,195	-		PFLU_RS25205	0.41	-0.1
5,632,195	-		PFLU_RS25205	0.41	+1.9
5,632,195	-		PFLU_RS25205	0.41	+3.5
5,632,195	-		PFLU_RS25205	0.41	-0.1
5,632,195	-		PFLU_RS25205	0.41	+0.9
5,632,195	-		PFLU_RS25205	0.41	+3.5
5,632,195	-		PFLU_RS25205	0.41	+2.2
5,632,272	+		PFLU_RS25205	0.63	+3.0
5,632,272	+		PFLU_RS25205	0.63	+2.9
5,632,272	+		PFLU_RS25205	0.63	+3.2
5,632,273	-		PFLU_RS25205	0.64	+3.6
5,632,273	-		PFLU_RS25205	0.64	+3.3
5,632,273	-		PFLU_RS25205	0.64	-0.1
5,632,273	-		PFLU_RS25205	0.64	+1.9
5,632,332	+		PFLU_RS25205	0.81	+3.5
5,632,332	+		PFLU_RS25205	0.81	-0.4
5,632,332	+		PFLU_RS25205	0.81	+3.5
5,632,332	+		PFLU_RS25205	0.81	+2.3
5,632,333	-		PFLU_RS25205	0.81	+0.0
5,632,333	-		PFLU_RS25205	0.81	+0.0
5,632,333	-		PFLU_RS25205	0.81	+0.3
5,632,333	-		PFLU_RS25205	0.81	+1.9
5,632,339	+		PFLU_RS25205	0.83	+0.9
5,632,340	-		PFLU_RS25205	0.83	+3.7
5,632,340	-		PFLU_RS25205	0.83	+3.5
5,632,340	-		PFLU_RS25205	0.83	+2.9
5,632,340	-		PFLU_RS25205	0.83	+1.9
5,632,390	+				+0.3
5,632,390	+				+1.2
5,632,398	-				+1.9
5,632,398	-				+3.8
5,632,415	+				+2.2
5,632,415	+				+2.5
5,632,416	-				-1.4
5,632,526	+		PFLU_RS25210	0.21	+0.9
5,632,526	+		PFLU_RS25210	0.21	+2.2
5,632,526	+		PFLU_RS25210	0.21	+2.3
5,632,526	+		PFLU_RS25210	0.21	+3.5
5,632,526	+		PFLU_RS25210	0.21	+3.5
5,632,527	-		PFLU_RS25210	0.21	+0.6
5,632,527	-		PFLU_RS25210	0.21	+2.6
5,632,527	-		PFLU_RS25210	0.21	+2.2
5,632,527	-		PFLU_RS25210	0.21	+2.6
5,632,527	-		PFLU_RS25210	0.21	+3.7
5,632,527	-		PFLU_RS25210	0.21	+3.2
5,632,527	-		PFLU_RS25210	0.21	+1.9
5,632,527	-		PFLU_RS25210	0.21	+3.7
5,632,527	-		PFLU_RS25210	0.21	+3.7
5,632,561	+		PFLU_RS25210	0.26	+2.5
5,632,717	+		PFLU_RS25210	0.51	+0.3
5,632,718	-		PFLU_RS25210	0.51	+3.5
5,632,739	+		PFLU_RS25210	0.55	+1.5
5,632,739	+		PFLU_RS25210	0.55	+2.1
5,632,739	+		PFLU_RS25210	0.55	+2.6
5,632,739	+		PFLU_RS25210	0.55	+3.9
5,632,739	+		PFLU_RS25210	0.55	-0.4
5,632,739	+		PFLU_RS25210	0.55	+0.9
5,632,739	+		PFLU_RS25210	0.55	+3.5
5,632,740	-		PFLU_RS25210	0.55	+3.0
5,632,740	-		PFLU_RS25210	0.55	+1.9
5,632,740	-		PFLU_RS25210	0.55	-0.1
5,632,740	-		PFLU_RS25210	0.55	+4.2
5,632,740	-		PFLU_RS25210	0.55	+1.3
5,632,763	+		PFLU_RS25210	0.59	+2.1
5,632,763	+		PFLU_RS25210	0.59	+2.9
5,632,763	+		PFLU_RS25210	0.59	+2.9
5,632,764	-		PFLU_RS25210	0.59	+1.9
5,632,808	+		PFLU_RS25210	0.66	+3.6
5,632,809	-		PFLU_RS25210	0.66	+3.5
5,632,849	+		PFLU_RS25210	0.72	+1.9
5,632,850	-		PFLU_RS25210	0.72	+1.9
5,632,858	+		PFLU_RS25210	0.74	+1.9
5,632,858	+		PFLU_RS25210	0.74	+1.3
5,632,859	-		PFLU_RS25210	0.74	+2.6
5,632,871	+		PFLU_RS25210	0.76	+2.1
5,632,871	+		PFLU_RS25210	0.76	+2.5
5,632,871	+		PFLU_RS25210	0.76	+2.3
5,632,916	+		PFLU_RS25210	0.83	+0.3
5,632,916	+		PFLU_RS25210	0.83	+4.9
5,632,917	-		PFLU_RS25210	0.83	+1.7
5,633,012	-				+1.9
5,633,012	-				+1.8
5,633,027	+				+3.0
5,633,027	+				+2.2
5,633,027	+				+1.1
5,633,028	-				+2.9
5,633,028	-				+1.9
5,633,050	+				+2.4
5,633,050	+				+2.1
5,633,051	-				-2.4
5,633,138	+				+2.3
5,633,138	+				+1.9
5,633,138	+				+3.5
5,633,138	+				-0.9
5,633,139	-				+1.9
5,633,139	-				-0.1
5,633,139	-				-0.1
5,633,139	-				+1.9
5,633,139	-				+0.9
5,633,139	-				+3.5
5,633,139	-				+4.2
5,633,306	+		PFLU_RS25215	0.14	+1.9
5,633,306	+		PFLU_RS25215	0.14	+1.5
5,633,306	+		PFLU_RS25215	0.14	+0.9
5,633,313	+		PFLU_RS25215	0.14	+1.9
5,633,313	+		PFLU_RS25215	0.14	+2.6
5,633,313	+		PFLU_RS25215	0.14	+0.6
5,633,313	+		PFLU_RS25215	0.14	+3.3
5,633,314	-		PFLU_RS25215	0.14	+1.3
5,633,324	+		PFLU_RS25215	0.15	+1.4
5,633,325	-		PFLU_RS25215	0.15	+4.7
5,633,332	-		PFLU_RS25215	0.15	+2.5
5,633,396	+		PFLU_RS25215	0.18	+0.3
5,633,396	+		PFLU_RS25215	0.18	+4.2
5,633,396	+		PFLU_RS25215	0.18	+0.3
5,633,396	+		PFLU_RS25215	0.18	+4.8
5,633,396	+		PFLU_RS25215	0.18	+3.9
5,633,397	-		PFLU_RS25215	0.18	+3.9
5,633,397	-		PFLU_RS25215	0.18	+1.5
5,633,475	+		PFLU_RS25215	0.22	+2.9
5,633,495	+		PFLU_RS25215	0.23	+3.1
5,633,496	-		PFLU_RS25215	0.23	+0.9
5,633,496	-		PFLU_RS25215	0.23	+1.3
5,633,558	+		PFLU_RS25215	0.26	+1.9
5,633,558	+		PFLU_RS25215	0.26	+0.9
5,633,558	+		PFLU_RS25215	0.26	+0.9
5,633,559	-		PFLU_RS25215	0.26	+2.8
5,633,559	-		PFLU_RS25215	0.26	+2.3
5,633,559	-		PFLU_RS25215	0.26	+1.9
5,633,564	+		PFLU_RS25215	0.27	+0.9
5,633,564	+		PFLU_RS25215	0.27	+3.0
5,633,564	+		PFLU_RS25215	0.27	+3.4
5,633,564	+		PFLU_RS25215	0.27	+4.4
5,633,565	-		PFLU_RS25215	0.27	+1.9
5,633,630	+		PFLU_RS25215	0.30	+4.1
5,633,630	+		PFLU_RS25215	0.30	+1.9
5,633,630	+		PFLU_RS25215	0.30	+3.8
5,633,630	+		PFLU_RS25215	0.30	+3.8
5,633,630	+		PFLU_RS25215	0.30	+3.1
5,633,631	-		PFLU_RS25215	0.30	+1.9
5,633,631	-		PFLU_RS25215	0.30	+3.9
5,633,631	-		PFLU_RS25215	0.30	+3.2
5,633,730	-		PFLU_RS25215	0.35	+0.9
5,633,750	+		PFLU_RS25215	0.36	+1.2
5,633,751	-		PFLU_RS25215	0.36	+4.9
5,633,751	-		PFLU_RS25215	0.36	+2.3
5,633,751	-		PFLU_RS25215	0.36	+4.9
5,633,848	+		PFLU_RS25215	0.41	+3.5
5,633,849	-		PFLU_RS25215	0.41	+2.9
5,633,933	+		PFLU_RS25215	0.45	+3.5
5,633,933	+		PFLU_RS25215	0.45	+2.4
5,633,934	-		PFLU_RS25215	0.45	+3.1
5,633,934	-		PFLU_RS25215	0.45	+3.5
5,633,934	-		PFLU_RS25215	0.45	+2.6
5,633,956	+		PFLU_RS25215	0.46	+3.2
5,633,956	+		PFLU_RS25215	0.46	+2.7
5,633,956	+		PFLU_RS25215	0.46	-0.4
5,633,957	-		PFLU_RS25215	0.46	+2.8