Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27405

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,093,496	+				+1.8
6,093,496	+				-1.6
6,093,496	+				-0.0
6,093,496	+				+0.7
6,093,496	+				-1.2
6,093,497	-				-1.5
6,093,497	-				-0.2
6,093,497	-				-0.6
6,093,560	+				+0.6
6,093,560	+				-1.3
6,093,560	+				+0.8
6,093,560	+				-1.3
6,093,560	+				+0.1
6,093,561	-				-0.8
6,093,561	-				-1.1
6,093,561	-				+0.2
6,093,561	-				-0.4
6,093,561	-				+1.2
6,093,561	-				-0.8
6,093,561	-				+0.7
6,093,561	-				+0.6
6,093,561	-				-0.1
6,094,076	+		PFLU_RS27400	0.54	+2.0
6,094,076	+		PFLU_RS27400	0.54	-0.3
6,094,076	+		PFLU_RS27400	0.54	-1.1
6,094,076	+		PFLU_RS27400	0.54	+1.7
6,094,076	+		PFLU_RS27400	0.54	-0.6
6,094,077	-		PFLU_RS27400	0.54	+0.2
6,094,077	-		PFLU_RS27400	0.54	+0.1
6,094,077	-		PFLU_RS27400	0.54	+0.7
6,094,158	+		PFLU_RS27400	0.64	+1.1
6,094,283	+		PFLU_RS27400	0.79	+1.6
6,094,313	+		PFLU_RS27400	0.83	-0.2
6,094,314	-		PFLU_RS27400	0.83	-0.3
6,094,369	+		PFLU_RS27400	0.89	+1.5
6,094,370	-		PFLU_RS27400	0.90	+0.8
6,094,370	-		PFLU_RS27400	0.90	-0.6
6,094,412	+				+0.7
6,094,412	+				-0.8
6,094,413	-				+0.2
6,094,413	-				+0.6
6,094,440	+				-2.1
6,094,440	+				+1.3
6,094,440	+				-0.1
6,094,440	+				+0.8
6,094,440	+				+0.8
6,094,440	+				-0.8
6,094,440	+				+0.5
6,094,440	+				+0.2
6,094,440	+				-0.1
6,094,440	+				+1.4
6,094,440	+				-0.4
6,094,440	+				+1.3
6,094,440	+				+0.4
6,094,440	+				+0.0
6,094,440	+				+1.2
6,094,440	+				+1.5
6,094,441	-				+0.0
6,094,441	-				-0.6
6,094,441	-				+0.7
6,094,441	-				-0.0
6,094,441	-				-1.1
6,094,441	-				-1.5
6,094,441	-				+0.2
6,094,441	-				+0.0
6,094,441	-				+0.8
6,094,441	-				+1.0
6,094,441	-				+1.6
6,094,441	-				+0.8
6,094,441	-				-2.8
6,094,441	-				-0.2
6,094,441	-				+0.1
6,094,441	-				-0.2
6,094,441	-				+0.8
6,094,441	-				+0.7
6,094,441	-				-0.1
6,094,441	-				-0.8
6,094,441	-				-0.2
6,094,441	-				+2.1
6,094,441	-				+0.9
6,094,441	-				+0.8
6,094,441	-				+0.8
6,094,441	-				+2.4
6,094,441	-				-0.8
6,094,441	-				+0.6
6,094,441	-				-0.9
6,094,441	-				+1.2
6,094,441	-				+0.5
6,094,441	-				+1.8
6,094,441	-				+0.1
6,094,441	-				+2.2
6,094,441	-				+1.5
6,094,441	-				+0.1
6,094,441	-				-1.5
6,094,441	-				-0.3
6,094,441	-				+0.5
6,094,442	+				+1.0
6,094,442	+				+1.4
6,094,442	+				+1.1
6,094,442	+				+0.3
6,094,442	+				+0.4
6,094,442	+				+0.4
6,094,442	+				+2.1
6,094,442	+				-1.5
6,094,442	+				+2.0
6,094,442	+				+1.9
6,094,442	+				-0.4
6,094,442	+				+0.4
6,094,442	+				+0.9
6,094,442	+				-0.1
6,094,442	+				-1.1
6,094,442	+				-0.6
6,094,442	+				+1.4
6,094,442	+				+1.1
6,094,442	+				-0.7
6,094,442	+				+0.2
6,094,442	+				-0.4
6,094,442	+				+1.1
6,094,442	+				-0.6
6,094,442	+				+1.8
6,094,442	+				+0.7
6,094,442	+				-0.8
6,094,442	+				-0.5
6,094,442	+				+1.2
6,094,442	+				-1.1
6,094,443	-				-0.3
6,094,443	-				-0.6
6,094,443	-				-0.9
6,094,443	-				+0.1
6,094,443	-				-1.0
6,094,443	-				-1.9
6,094,443	-				+0.5
6,094,443	-				+0.4
6,094,443	-				-0.2
6,094,443	-				+0.6
6,094,443	-				+1.1
6,094,443	-				+0.4
6,094,443	-				+1.1
6,094,443	-				-0.8
6,094,443	-				+0.1
6,094,443	-				+1.2
6,094,443	-				+1.0
6,094,443	-				+0.6
6,094,443	-				+0.4
6,094,443	-				+0.8
6,094,443	-				+1.2
6,094,443	-				+1.1
6,094,443	-				-1.1
6,094,443	-				-1.6
6,094,443	-				+0.2
6,094,443	-				+3.6
6,094,443	-				-3.2
6,094,443	-				-0.8
6,094,469	+				+0.0
6,094,469	+				+0.8
6,094,469	+				-2.2
6,094,470	-				-0.3
6,094,470	-				-0.5
6,094,470	-				+1.8
6,094,470	-				-1.8
6,094,470	-				-1.9
6,094,470	-				-0.3
6,094,508	+				+2.1
6,094,508	+				+1.7
6,094,508	+				+0.8
6,094,508	+				+1.1
6,094,508	+				-0.7
6,094,508	+				+2.8
6,094,508	+				+0.0
6,094,508	+				+2.0
6,094,508	+				-1.4
6,094,508	+				+1.6
6,094,508	+				+0.4
6,094,509	-				+0.9
6,094,509	-				+1.4
6,094,509	-				+2.2
6,094,509	-				-0.1
6,094,509	-				+0.9
6,094,509	-				+1.5
6,094,517	+				+1.3
6,094,517	+				+1.2
6,094,517	+				+1.6
6,094,517	+				-1.8
6,094,517	+				+1.8
6,094,517	+				-0.4
6,094,517	+				+1.0
6,094,517	+				+0.6
6,094,518	-				+0.3
6,094,518	-				+1.3
6,094,578	+				+1.2
6,094,579	-				+0.8
6,094,592	+				+0.3
6,094,592	+				-0.3
6,094,592	+				+0.3
6,094,607	+		PFLU_RS27405	0.11	+0.7
6,094,607	+		PFLU_RS27405	0.11	+1.6
6,094,607	+		PFLU_RS27405	0.11	-0.4
6,094,607	+		PFLU_RS27405	0.11	-2.4
6,094,607	+		PFLU_RS27405	0.11	-1.5
6,094,607	+		PFLU_RS27405	0.11	+1.0
6,094,608	-		PFLU_RS27405	0.11	+0.4
6,094,608	-		PFLU_RS27405	0.11	-0.2
6,094,608	-		PFLU_RS27405	0.11	-0.5
6,094,608	-		PFLU_RS27405	0.11	+1.4
6,094,608	-		PFLU_RS27405	0.11	+3.1
6,094,608	-		PFLU_RS27405	0.11	+0.2
6,094,608	-		PFLU_RS27405	0.11	+1.7
6,094,608	-		PFLU_RS27405	0.11	-0.7
6,094,608	-		PFLU_RS27405	0.11	+1.0
6,094,655	+		PFLU_RS27405	0.15	+0.7
6,094,655	+		PFLU_RS27405	0.15	+0.8
6,094,655	+		PFLU_RS27405	0.15	+2.8
6,094,655	+		PFLU_RS27405	0.15	+0.5
6,094,655	+		PFLU_RS27405	0.15	+1.3
6,094,655	+		PFLU_RS27405	0.15	+0.3
6,094,655	+		PFLU_RS27405	0.15	+0.8
6,094,655	+		PFLU_RS27405	0.15	+1.2
6,094,655	+		PFLU_RS27405	0.15	-0.4
6,094,655	+		PFLU_RS27405	0.15	-1.2
6,094,655	+		PFLU_RS27405	0.15	+0.8
6,094,655	+		PFLU_RS27405	0.15	-0.3
6,094,655	+		PFLU_RS27405	0.15	-0.5
6,094,655	+		PFLU_RS27405	0.15	+0.5
6,094,655	+		PFLU_RS27405	0.15	+0.4
6,094,655	+		PFLU_RS27405	0.15	-0.8
6,094,655	+		PFLU_RS27405	0.15	+1.4
6,094,655	+		PFLU_RS27405	0.15	-0.1
6,094,655	+		PFLU_RS27405	0.15	+0.1
6,094,655	+		PFLU_RS27405	0.15	+0.2
6,094,655	+		PFLU_RS27405	0.15	+1.2
6,094,655	+		PFLU_RS27405	0.15	+0.5
6,094,656	-		PFLU_RS27405	0.15	-0.2
6,094,656	-		PFLU_RS27405	0.15	+0.8
6,094,656	-		PFLU_RS27405	0.15	-2.5
6,094,656	-		PFLU_RS27405	0.15	+1.6
6,094,656	-		PFLU_RS27405	0.15	-1.9
6,094,656	-		PFLU_RS27405	0.15	+0.0
6,094,656	-		PFLU_RS27405	0.15	-0.4
6,094,656	-		PFLU_RS27405	0.15	+1.4
6,094,656	-		PFLU_RS27405	0.15	+0.9
6,094,656	-		PFLU_RS27405	0.15	-0.3
6,094,656	-		PFLU_RS27405	0.15	+0.5
6,094,656	-		PFLU_RS27405	0.15	+0.4
6,094,656	-		PFLU_RS27405	0.15	+2.1
6,094,656	-		PFLU_RS27405	0.15	-0.3
6,094,656	-		PFLU_RS27405	0.15	+1.7
6,094,656	-		PFLU_RS27405	0.15	-2.3
6,094,656	-		PFLU_RS27405	0.15	-1.3
6,094,656	-		PFLU_RS27405	0.15	+1.8
6,094,658	+		PFLU_RS27405	0.15	+1.5
6,094,658	+		PFLU_RS27405	0.15	+1.0
6,094,658	+		PFLU_RS27405	0.15	+0.7
6,094,659	-		PFLU_RS27405	0.15	-2.1
6,094,659	-		PFLU_RS27405	0.15	+0.4
6,094,659	-		PFLU_RS27405	0.15	+1.3
6,094,709	+		PFLU_RS27405	0.19	-0.1
6,094,709	+		PFLU_RS27405	0.19	+2.0
6,094,709	+		PFLU_RS27405	0.19	-0.7
6,094,709	+		PFLU_RS27405	0.19	-1.5
6,094,710	-		PFLU_RS27405	0.19	-0.3
6,094,710	-		PFLU_RS27405	0.19	-0.3
6,094,710	-		PFLU_RS27405	0.19	+0.5
6,094,724	+		PFLU_RS27405	0.21	+1.2
6,094,725	-		PFLU_RS27405	0.21	+0.4
6,094,725	-		PFLU_RS27405	0.21	+0.1
6,094,781	+		PFLU_RS27405	0.25	+0.4
6,094,781	+		PFLU_RS27405	0.25	-0.5
6,094,781	+		PFLU_RS27405	0.25	-0.8
6,094,781	+		PFLU_RS27405	0.25	+0.2
6,094,781	+		PFLU_RS27405	0.25	-0.3
6,094,781	+		PFLU_RS27405	0.25	+0.3
6,094,781	+		PFLU_RS27405	0.25	+1.5
6,094,782	-		PFLU_RS27405	0.25	+0.1
6,094,782	-		PFLU_RS27405	0.25	+1.1
6,094,782	-		PFLU_RS27405	0.25	+1.2
6,094,782	-		PFLU_RS27405	0.25	+2.4
6,094,782	-		PFLU_RS27405	0.25	+1.3
6,094,782	-		PFLU_RS27405	0.25	-0.3
6,094,782	-		PFLU_RS27405	0.25	-2.1
6,094,782	-		PFLU_RS27405	0.25	+1.6
6,094,782	-		PFLU_RS27405	0.25	-2.6
6,094,782	-		PFLU_RS27405	0.25	+0.8
6,094,811	+		PFLU_RS27405	0.27	+0.8
6,094,811	+		PFLU_RS27405	0.27	+1.7
6,094,811	+		PFLU_RS27405	0.27	+0.7
6,094,811	+		PFLU_RS27405	0.27	+2.2
6,094,811	+		PFLU_RS27405	0.27	+0.4
6,094,811	+		PFLU_RS27405	0.27	-0.0
6,094,811	+		PFLU_RS27405	0.27	-0.7
6,094,811	+		PFLU_RS27405	0.27	+0.0
6,094,812	-		PFLU_RS27405	0.28	-0.4
6,094,812	-		PFLU_RS27405	0.28	-0.3
6,094,812	-		PFLU_RS27405	0.28	+0.4
6,094,812	-		PFLU_RS27405	0.28	+0.5
6,094,859	+		PFLU_RS27405	0.31	+1.6
6,094,859	+		PFLU_RS27405	0.31	+1.5
6,094,859	+		PFLU_RS27405	0.31	+1.7
6,094,859	+		PFLU_RS27405	0.31	+0.3
6,094,859	+		PFLU_RS27405	0.31	-0.6
6,094,859	+		PFLU_RS27405	0.31	-0.5
6,094,859	+		PFLU_RS27405	0.31	+1.5
6,094,860	-		PFLU_RS27405	0.31	+0.2
6,094,860	-		PFLU_RS27405	0.31	+0.0
6,094,860	-		PFLU_RS27405	0.31	+1.0
6,094,860	-		PFLU_RS27405	0.31	+0.1
6,094,860	-		PFLU_RS27405	0.31	+2.2
6,094,860	-		PFLU_RS27405	0.31	+1.6
6,094,860	-		PFLU_RS27405	0.31	+1.0
6,094,860	-		PFLU_RS27405	0.31	+0.4
6,094,860	-		PFLU_RS27405	0.31	+2.6
6,094,860	-		PFLU_RS27405	0.31	-0.8
6,094,869	+		PFLU_RS27405	0.32	+0.4
6,095,008	+		PFLU_RS27405	0.43	+1.4
6,095,008	+		PFLU_RS27405	0.43	+1.0
6,095,008	+		PFLU_RS27405	0.43	-1.2
6,095,008	+		PFLU_RS27405	0.43	-0.0
6,095,008	+		PFLU_RS27405	0.43	+1.0
6,095,008	+		PFLU_RS27405	0.43	+1.6
6,095,008	+		PFLU_RS27405	0.43	+0.6
6,095,008	+		PFLU_RS27405	0.43	-0.1
6,095,008	+		PFLU_RS27405	0.43	+0.5
6,095,009	-		PFLU_RS27405	0.43	-1.1
6,095,009	-		PFLU_RS27405	0.43	+0.4
6,095,009	-		PFLU_RS27405	0.43	+1.3
6,095,009	-		PFLU_RS27405	0.43	+0.0
6,095,009	-		PFLU_RS27405	0.43	+2.4
6,095,009	-		PFLU_RS27405	0.43	+1.9
6,095,009	-		PFLU_RS27405	0.43	+1.0
6,095,009	-		PFLU_RS27405	0.43	-0.4
6,095,009	-		PFLU_RS27405	0.43	-0.6
6,095,009	-		PFLU_RS27405	0.43	-2.1
6,095,009	-		PFLU_RS27405	0.43	+0.7
6,095,057	+		PFLU_RS27405	0.47	+0.6
6,095,058	-		PFLU_RS27405	0.47	-1.1
6,095,058	-		PFLU_RS27405	0.47	+2.6
6,095,058	-		PFLU_RS27405	0.47	+2.6
6,095,058	-		PFLU_RS27405	0.47	+1.6
6,095,088	+		PFLU_RS27405	0.50	+1.5
6,095,088	+		PFLU_RS27405	0.50	+0.8
6,095,089	-		PFLU_RS27405	0.50	+0.5
6,095,089	-		PFLU_RS27405	0.50	+2.7
6,095,089	-		PFLU_RS27405	0.50	-1.0
6,095,089	-		PFLU_RS27405	0.50	-0.2
6,095,138	+		PFLU_RS27405	0.54	+1.6
6,095,138	+		PFLU_RS27405	0.54	+1.2
6,095,138	+		PFLU_RS27405	0.54	+0.6
6,095,138	+		PFLU_RS27405	0.54	+1.8
6,095,138	+		PFLU_RS27405	0.54	+1.0
6,095,138	+		PFLU_RS27405	0.54	+2.1
6,095,138	+		PFLU_RS27405	0.54	-0.3
6,095,138	+		PFLU_RS27405	0.54	-0.6
6,095,138	+		PFLU_RS27405	0.54	+0.5
6,095,138	+		PFLU_RS27405	0.54	+0.7
6,095,139	-		PFLU_RS27405	0.54	+2.6
6,095,139	-		PFLU_RS27405	0.54	+1.8
6,095,139	-		PFLU_RS27405	0.54	+1.9
6,095,139	-		PFLU_RS27405	0.54	+1.6
6,095,139	-		PFLU_RS27405	0.54	+0.5
6,095,167	+		PFLU_RS27405	0.56	+2.7
6,095,167	+		PFLU_RS27405	0.56	-0.2
6,095,167	+		PFLU_RS27405	0.56	+0.1
6,095,167	+		PFLU_RS27405	0.56	+0.8
6,095,213	+		PFLU_RS27405	0.60	+1.4
6,095,213	+		PFLU_RS27405	0.60	+0.4
6,095,213	+		PFLU_RS27405	0.60	+0.1
6,095,213	+		PFLU_RS27405	0.60	-1.1
6,095,214	-		PFLU_RS27405	0.60	+0.2
6,095,214	-		PFLU_RS27405	0.60	+1.2
6,095,214	-		PFLU_RS27405	0.60	+1.4
6,095,214	-		PFLU_RS27405	0.60	+1.5
6,095,214	-		PFLU_RS27405	0.60	-0.1
6,095,214	-		PFLU_RS27405	0.60	-0.3
6,095,214	-		PFLU_RS27405	0.60	+0.6
6,095,214	-		PFLU_RS27405	0.60	-0.5
6,095,235	+		PFLU_RS27405	0.61	+0.4
6,095,258	+		PFLU_RS27405	0.63	+0.9
6,095,258	+		PFLU_RS27405	0.63	+1.2
6,095,258	+		PFLU_RS27405	0.63	+0.2
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6,095,304	+		PFLU_RS27405	0.67	+0.0
6,095,304	+		PFLU_RS27405	0.67	+1.1
6,095,304	+		PFLU_RS27405	0.67	+1.2
6,095,304	+		PFLU_RS27405	0.67	-0.1
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6,095,305	-		PFLU_RS27405	0.67	+1.0
6,095,305	-		PFLU_RS27405	0.67	+1.0
6,095,305	-		PFLU_RS27405	0.67	-1.5
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6,095,305	-		PFLU_RS27405	0.67	+1.3
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6,095,305	-		PFLU_RS27405	0.67	+0.4
6,095,305	-		PFLU_RS27405	0.67	+0.6
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6,095,305	-		PFLU_RS27405	0.67	-1.3
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6,095,305	-		PFLU_RS27405	0.67	+1.3
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6,095,305	-		PFLU_RS27405	0.67	+1.5
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6,095,306	+		PFLU_RS27405	0.67	+1.3
6,095,306	+		PFLU_RS27405	0.67	+2.1
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6,095,307	-		PFLU_RS27405	0.67	+1.1
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6,095,307	-		PFLU_RS27405	0.67	+0.0
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6,095,457	-		PFLU_RS27405	0.79	+0.2
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6,095,556	-		PFLU_RS27405	0.87	+0.6
6,095,556	-		PFLU_RS27405	0.87	+0.2
6,095,640	+				+0.3
6,095,750	+				-0.1
6,095,750	+				+0.1
6,095,750	+				-2.3
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6,095,750	+				-0.4
6,095,750	+				+0.1
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6,095,750	+				-0.8
6,095,750	+				-1.9
6,095,750	+				+0.9
6,095,750	+				+2.1
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6,095,750	+				-1.2
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6,095,750	+				-1.0
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6,095,751	-				+0.4
6,095,751	-				-2.8
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6,095,899	+				+2.5
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6,096,210	+		PFLU_RS27410	0.28	-0.5
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6,096,277	-		PFLU_RS27410	0.34	+1.2
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6,096,312	+		PFLU_RS27410	0.38	+1.6
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6,096,417	+		PFLU_RS27410	0.48	-0.3
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6,096,468	+		PFLU_RS27410	0.53	+1.3
6,096,468	+		PFLU_RS27410	0.53	-2.0
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6,096,468	+		PFLU_RS27410	0.53	+0.1
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6,096,469	-		PFLU_RS27410	0.53	+0.5
6,096,469	-		PFLU_RS27410	0.53	+1.5
6,096,469	-		PFLU_RS27410	0.53	+0.9
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6,096,557	-		PFLU_RS27410	0.61	+1.5
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6,096,567	+		PFLU_RS27410	0.62	+1.4
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6,096,588	-		PFLU_RS27410	0.64	+1.8
6,096,588	-		PFLU_RS27410	0.64	-0.1
6,096,588	-		PFLU_RS27410	0.64	+0.8
6,096,588	-		PFLU_RS27410	0.64	+0.3
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6,096,630	+		PFLU_RS27410	0.68	+1.2
6,096,630	+		PFLU_RS27410	0.68	+0.6
6,096,630	+		PFLU_RS27410	0.68	-0.7
6,096,630	+		PFLU_RS27410	0.68	+0.9
6,096,630	+		PFLU_RS27410	0.68	+1.0
6,096,630	+		PFLU_RS27410	0.68	-0.8
6,096,631	-		PFLU_RS27410	0.68	+0.3