Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24255

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
5,428,579	+		PFLU_RS24245	0.67	+0.8
5,428,579	+		PFLU_RS24245	0.67	-0.2
5,428,579	+		PFLU_RS24245	0.67	+0.3
5,428,610	-		PFLU_RS24245	0.75	+0.0
5,428,627	-		PFLU_RS24245	0.80	+0.8
5,428,658	+		PFLU_RS24245	0.89	-3.2
5,428,659	-		PFLU_RS24245	0.89	-2.9
5,428,659	-		PFLU_RS24245	0.89	-0.5
5,428,659	-		PFLU_RS24245	0.89	+0.3
5,428,663	+				-0.3
5,428,663	+				+1.0
5,428,663	+				+3.4
5,428,663	+				+0.8
5,428,663	+				-0.6
5,428,663	+				+0.9
5,428,663	+				+0.1
5,428,663	+				-1.3
5,428,663	+				+0.9
5,428,663	+				+0.6
5,428,664	-				+0.4
5,428,664	-				-0.5
5,428,664	-				+0.9
5,428,664	-				+1.2
5,428,664	-				-0.6
5,428,664	-				-1.1
5,428,664	-				+0.1
5,428,664	-				+1.3
5,428,693	-				+0.1
5,428,756	+				-0.2
5,428,756	+				+0.9
5,428,756	+				+1.9
5,428,756	+				-1.1
5,428,756	+				+0.8
5,428,757	-				-0.8
5,428,757	-				-0.4
5,428,757	-				+0.9
5,428,757	-				+1.7
5,428,757	-				-0.1
5,428,757	-				-0.3
5,428,788	+				+1.2
5,428,789	-				-0.2
5,428,798	+				-0.8
5,428,799	-				+0.3
5,428,810	-				-0.3
5,428,858	+				+1.3
5,428,858	+				-1.9
5,428,872	+				+1.4
5,428,872	+				-0.0
5,428,872	+				-0.6
5,428,872	+				+0.4
5,428,873	-				-1.7
5,428,873	-				+0.0
5,428,873	-				-0.3
5,428,873	-				-0.9
5,428,873	-				-0.1
5,428,873	-				-2.3
5,428,873	-				+0.4
5,428,905	+				+0.8
5,428,906	-				-1.7
5,428,919	+				+0.0
5,428,919	+				+1.6
5,428,919	+				-0.7
5,428,919	+				+1.8
5,428,928	-				-0.3
5,428,928	-				-0.3
5,428,968	-		PFLU_RS24250	0.12	+1.4
5,429,012	+		PFLU_RS24250	0.23	+3.0
5,429,013	-		PFLU_RS24250	0.24	+1.3
5,429,018	+		PFLU_RS24250	0.25	+1.2
5,429,018	+		PFLU_RS24250	0.25	+1.1
5,429,018	+		PFLU_RS24250	0.25	+0.2
5,429,019	-		PFLU_RS24250	0.25	-0.1
5,429,019	-		PFLU_RS24250	0.25	-0.7
5,429,019	-		PFLU_RS24250	0.25	+0.4
5,429,054	+		PFLU_RS24250	0.35	+0.2
5,429,055	-		PFLU_RS24250	0.35	+3.0
5,429,055	-		PFLU_RS24250	0.35	-1.7
5,429,055	-		PFLU_RS24250	0.35	+0.9
5,429,055	-		PFLU_RS24250	0.35	-0.9
5,429,055	-		PFLU_RS24250	0.35	-0.5
5,429,132	+		PFLU_RS24250	0.55	+0.7
5,429,132	+		PFLU_RS24250	0.55	-0.4
5,429,132	+		PFLU_RS24250	0.55	+0.1
5,429,132	+		PFLU_RS24250	0.55	-0.1
5,429,132	+		PFLU_RS24250	0.55	+1.3
5,429,132	+		PFLU_RS24250	0.55	+0.8
5,429,132	+		PFLU_RS24250	0.55	+1.7
5,429,133	-		PFLU_RS24250	0.56	-0.4
5,429,133	-		PFLU_RS24250	0.56	+0.6
5,429,133	-		PFLU_RS24250	0.56	+0.2
5,429,133	-		PFLU_RS24250	0.56	+0.3
5,429,133	-		PFLU_RS24250	0.56	+1.1
5,429,133	-		PFLU_RS24250	0.56	-0.8
5,429,204	+		PFLU_RS24250	0.75	+2.3
5,429,204	+		PFLU_RS24250	0.75	+0.6
5,429,204	+		PFLU_RS24250	0.75	+0.3
5,429,204	+		PFLU_RS24250	0.75	-1.7
5,429,204	+		PFLU_RS24250	0.75	+1.0
5,429,205	-		PFLU_RS24250	0.75	-0.1
5,429,205	-		PFLU_RS24250	0.75	-1.7
5,429,205	-		PFLU_RS24250	0.75	+0.7
5,429,205	-		PFLU_RS24250	0.75	-1.9
5,429,205	-		PFLU_RS24250	0.75	-1.1
5,429,205	-		PFLU_RS24250	0.75	+1.3
5,429,205	-		PFLU_RS24250	0.75	-1.9
5,429,205	-		PFLU_RS24250	0.75	-0.3
5,429,205	-		PFLU_RS24250	0.75	-1.1
5,429,214	-		PFLU_RS24250	0.77	+0.3
5,429,324	+				-1.1
5,429,324	+				+0.3
5,429,324	+				-0.8
5,429,324	+				-0.3
5,429,324	+				+0.8
5,429,325	-				-1.1
5,429,360	+				+0.7
5,429,360	+				+0.2
5,429,360	+				+1.1
5,429,360	+				-0.4
5,429,360	+				-1.9
5,429,360	+				-0.6
5,429,361	-				-1.6
5,429,394	+				-2.9
5,429,395	-				-0.7
5,429,395	-				-1.4
5,429,395	-				-2.3
5,429,398	+				-0.1
5,429,398	+				-1.6
5,429,398	+				-0.9
5,429,398	+				+2.4
5,429,398	+				-1.6
5,429,398	+				+1.0
5,429,398	+				+0.3
5,429,398	+				-0.4
5,429,398	+				+0.4
5,429,399	-				-1.1
5,429,399	-				-1.7
5,429,399	-				-1.9
5,429,399	-				-0.6
5,429,418	+				-2.3
5,429,418	+				+0.8
5,429,419	-				-0.4
5,429,419	-				-1.4
5,429,419	-				-0.6
5,429,433	+				-1.4
5,429,433	+				-1.2
5,429,433	+				-1.6
5,429,433	+				+0.4
5,429,433	+				-1.9
5,429,433	+				-1.4
5,429,433	+				+1.9
5,429,433	+				-2.7
5,429,433	+				-0.6
5,429,433	+				-1.1
5,429,433	+				-1.4
5,429,433	+				+0.7
5,429,433	+				-0.9
5,429,433	+				-0.9
5,429,433	+				-2.4
5,429,433	+				+0.2
5,429,433	+				+0.4
5,429,434	-				-1.9
5,429,434	-				-0.1
5,429,434	-				-2.6
5,429,434	-				+0.4
5,429,434	-				-0.8
5,429,434	-				-0.1
5,429,434	-				-1.6
5,429,434	-				-0.6
5,429,434	-				-1.9
5,429,434	-				+0.4
5,429,434	-				+1.4
5,429,434	-				-1.4
5,429,434	-				-0.6
5,429,434	-				-1.4
5,429,434	-				-1.1
5,429,434	-				-1.1
5,429,434	-				-0.9
5,429,434	-				-2.3
5,429,434	-				-0.1
5,429,434	-				-0.1
5,429,434	-				-0.1
5,429,434	-				-2.5
5,429,434	-				-1.6
5,429,434	-				-0.1
5,429,434	-				+0.1
5,429,436	+				-0.1
5,429,436	+				-0.1
5,429,436	+				+0.4
5,429,436	+				-0.0
5,429,436	+				-0.6
5,429,436	+				-0.5
5,429,436	+				-1.1
5,429,436	+				-1.7
5,429,436	+				-0.8
5,429,437	-				-2.3
5,429,437	-				-1.4
5,429,437	-				-0.6
5,429,437	-				-1.4
5,429,437	-				-1.7
5,429,437	-				-2.1
5,429,437	-				+0.4
5,430,039	+		PFLU_RS24255	0.39	-0.9
5,430,039	+		PFLU_RS24255	0.39	-2.4
5,430,040	-		PFLU_RS24255	0.39	-0.7
5,430,040	-		PFLU_RS24255	0.39	+1.4
5,430,040	-		PFLU_RS24255	0.39	+1.4
5,430,081	+		PFLU_RS24255	0.42	+1.4
5,430,081	+		PFLU_RS24255	0.42	-1.1
5,430,081	+		PFLU_RS24255	0.42	-3.1
5,430,081	+		PFLU_RS24255	0.42	-0.1
5,430,082	-		PFLU_RS24255	0.42	-0.1
5,430,082	-		PFLU_RS24255	0.42	-0.6
5,430,396	+		PFLU_RS24255	0.64	-1.7
5,430,397	-		PFLU_RS24255	0.64	-0.1
5,430,397	-		PFLU_RS24255	0.64	-1.1
5,430,397	-		PFLU_RS24255	0.64	-0.9
5,430,457	+		PFLU_RS24255	0.68	-2.8
5,430,457	+		PFLU_RS24255	0.68	-0.9
5,430,457	+		PFLU_RS24255	0.68	-0.6
5,430,458	-		PFLU_RS24255	0.68	-0.6
5,430,473	+		PFLU_RS24255	0.69	-2.4
5,430,473	+		PFLU_RS24255	0.69	-0.9
5,430,473	+		PFLU_RS24255	0.69	-0.6
5,430,473	+		PFLU_RS24255	0.69	-1.6
5,430,473	+		PFLU_RS24255	0.69	-1.1
5,430,474	-		PFLU_RS24255	0.69	-1.7
5,430,474	-		PFLU_RS24255	0.69	+0.0
5,430,576	+		PFLU_RS24255	0.76	+1.4
5,430,576	+		PFLU_RS24255	0.76	-1.5
5,430,576	+		PFLU_RS24255	0.76	-2.1
5,430,576	+		PFLU_RS24255	0.76	-0.1
5,430,576	+		PFLU_RS24255	0.76	-2.4
5,430,576	+		PFLU_RS24255	0.76	-1.6
5,430,576	+		PFLU_RS24255	0.76	-0.7
5,430,576	+		PFLU_RS24255	0.76	+0.4
5,430,576	+		PFLU_RS24255	0.76	-1.7
5,430,576	+		PFLU_RS24255	0.76	-1.4
5,430,576	+		PFLU_RS24255	0.76	-2.6
5,430,576	+		PFLU_RS24255	0.76	-1.1
5,430,576	+		PFLU_RS24255	0.76	-0.6
5,430,576	+		PFLU_RS24255	0.76	-0.9
5,430,576	+		PFLU_RS24255	0.76	-1.4
5,430,576	+		PFLU_RS24255	0.76	-1.4
5,430,576	+		PFLU_RS24255	0.76	-1.7
5,430,576	+		PFLU_RS24255	0.76	-0.9
5,430,576	+		PFLU_RS24255	0.76	-2.6
5,430,576	+		PFLU_RS24255	0.76	+1.4
5,430,577	-		PFLU_RS24255	0.76	-1.4
5,430,577	-		PFLU_RS24255	0.76	-0.1
5,430,577	-		PFLU_RS24255	0.76	+0.7
5,430,577	-		PFLU_RS24255	0.76	+0.1
5,430,577	-		PFLU_RS24255	0.76	-1.9
5,430,577	-		PFLU_RS24255	0.76	-3.0
5,430,577	-		PFLU_RS24255	0.76	-1.1
5,430,577	-		PFLU_RS24255	0.76	-2.1
5,430,577	-		PFLU_RS24255	0.76	-1.9
5,430,577	-		PFLU_RS24255	0.76	-1.6
5,430,577	-		PFLU_RS24255	0.76	-0.1
5,430,577	-		PFLU_RS24255	0.76	-1.7
5,430,577	-		PFLU_RS24255	0.76	-0.6
5,430,633	+		PFLU_RS24255	0.80	+0.4
5,430,634	-		PFLU_RS24255	0.80	-0.1
5,430,634	-		PFLU_RS24255	0.80	+0.4
5,430,634	-		PFLU_RS24255	0.80	-2.0
5,430,678	+		PFLU_RS24255	0.83	-0.6
5,430,678	+		PFLU_RS24255	0.83	-0.6
5,430,678	+		PFLU_RS24255	0.83	-1.9
5,430,679	-		PFLU_RS24255	0.83	-1.6
5,430,679	-		PFLU_RS24255	0.83	+1.4
5,430,679	-		PFLU_RS24255	0.83	-0.1
5,430,679	-		PFLU_RS24255	0.83	-1.6
5,430,679	-		PFLU_RS24255	0.83	-2.1
5,430,735	+		PFLU_RS24255	0.87	+1.9
5,430,735	+		PFLU_RS24255	0.87	-1.4
5,430,735	+		PFLU_RS24255	0.87	-0.4
5,430,735	+		PFLU_RS24255	0.87	+0.9
5,430,735	+		PFLU_RS24255	0.87	-0.7
5,430,735	+		PFLU_RS24255	0.87	-0.6
5,430,735	+		PFLU_RS24255	0.87	-2.0
5,430,735	+		PFLU_RS24255	0.87	-1.4
5,430,735	+		PFLU_RS24255	0.87	+0.1
5,430,735	+		PFLU_RS24255	0.87	-1.7
5,430,735	+		PFLU_RS24255	0.87	-1.7
5,430,735	+		PFLU_RS24255	0.87	-0.6
5,430,736	-		PFLU_RS24255	0.87	-0.6
5,430,736	-		PFLU_RS24255	0.87	-1.1
5,430,736	-		PFLU_RS24255	0.87	-2.0
5,430,736	-		PFLU_RS24255	0.87	-0.9
5,430,736	-		PFLU_RS24255	0.87	-1.6
5,430,736	-		PFLU_RS24255	0.87	-1.7
5,430,736	-		PFLU_RS24255	0.87	-0.1
5,430,736	-		PFLU_RS24255	0.87	-0.9
5,430,820	+				+0.4
5,430,820	+				+1.4
5,430,821	-				-2.0
5,430,821	-				-0.6
5,430,821	-				-1.1
5,430,821	-				-1.1
5,430,861	+				+1.0
5,430,861	+				-2.3
5,430,861	+				-1.0
5,430,861	+				-0.4
5,430,861	+				-0.9
5,430,861	+				+0.9
5,430,861	+				-1.3
5,430,861	+				-1.0
5,430,861	+				-2.1
5,430,861	+				-2.1
5,430,861	+				-1.9
5,430,861	+				-0.6
5,430,862	-				-0.4
5,430,862	-				-0.9
5,430,862	-				+0.0
5,430,862	-				-1.9
5,430,862	-				-1.6
5,430,862	-				-1.0
5,430,862	-				+1.4
5,431,021	+				+0.6
5,431,021	+				-0.5
5,431,021	+				-0.5
5,431,021	+				+0.6
5,431,022	-				+0.9
5,431,022	-				-1.9
5,431,022	-				-0.8
5,431,022	-				-1.9
5,431,022	-				-1.1
5,431,022	-				+1.9
5,431,022	-				-0.3
5,431,040	+				+0.6
5,431,041	-				-0.5
5,431,041	-				-2.3
5,431,041	-				+0.1
5,431,041	-				+2.1
5,431,041	-				+0.6
5,431,305	+		PFLU_RS24260	0.37	+0.2
5,431,306	-		PFLU_RS24260	0.37	-1.9
5,431,306	-		PFLU_RS24260	0.37	-0.9
5,431,423	+		PFLU_RS24260	0.53	+1.4
5,431,423	+		PFLU_RS24260	0.53	-1.6
5,431,423	+		PFLU_RS24260	0.53	-0.6
5,431,423	+		PFLU_RS24260	0.53	-1.5
5,431,423	+		PFLU_RS24260	0.53	+0.4
5,431,423	+		PFLU_RS24260	0.53	-0.3
5,431,423	+		PFLU_RS24260	0.53	+1.4
5,431,423	+		PFLU_RS24260	0.53	-0.7
5,431,423	+		PFLU_RS24260	0.53	-1.3
5,431,423	+		PFLU_RS24260	0.53	-2.9
5,431,423	+		PFLU_RS24260	0.53	-0.2
5,431,423	+		PFLU_RS24260	0.53	+0.2
5,431,423	+		PFLU_RS24260	0.53	-0.3
5,431,423	+		PFLU_RS24260	0.53	+0.0
5,431,423	+		PFLU_RS24260	0.53	-0.4
5,431,423	+		PFLU_RS24260	0.53	+0.6
5,431,423	+		PFLU_RS24260	0.53	-0.9
5,431,423	+		PFLU_RS24260	0.53	-0.0
5,431,423	+		PFLU_RS24260	0.53	+0.9
5,431,423	+		PFLU_RS24260	0.53	-2.2
5,431,423	+		PFLU_RS24260	0.53	+0.1
5,431,423	+		PFLU_RS24260	0.53	+0.8
5,431,424	-		PFLU_RS24260	0.53	+0.1
5,431,424	-		PFLU_RS24260	0.53	-1.6
5,431,424	-		PFLU_RS24260	0.53	+0.7
5,431,424	-		PFLU_RS24260	0.53	+1.3
5,431,424	-		PFLU_RS24260	0.53	-2.1
5,431,424	-		PFLU_RS24260	0.53	-1.4
5,431,424	-		PFLU_RS24260	0.53	+1.8
5,431,424	-		PFLU_RS24260	0.53	-0.4
5,431,424	-		PFLU_RS24260	0.53	-0.3
5,431,424	-		PFLU_RS24260	0.53	-0.5
5,431,424	-		PFLU_RS24260	0.53	-2.1
5,431,424	-		PFLU_RS24260	0.53	-2.3
5,431,424	-		PFLU_RS24260	0.53	+0.6
5,431,424	-		PFLU_RS24260	0.53	+1.1
5,431,424	-		PFLU_RS24260	0.53	+1.4
5,431,424	-		PFLU_RS24260	0.53	-0.6
5,431,424	-		PFLU_RS24260	0.53	-1.6
5,431,623	+		PFLU_RS24260	0.80	+2.6
5,431,623	+		PFLU_RS24260	0.80	-1.0
5,431,623	+		PFLU_RS24260	0.80	+0.4
5,431,623	+		PFLU_RS24260	0.80	+0.6
5,431,624	-		PFLU_RS24260	0.80	+1.1
5,431,624	-		PFLU_RS24260	0.80	-0.5
5,431,624	-		PFLU_RS24260	0.80	+0.4
5,431,681	+		PFLU_RS24260	0.87	-0.3
5,431,681	+		PFLU_RS24260	0.87	-1.6
5,431,681	+		PFLU_RS24260	0.87	-0.0
5,431,681	+		PFLU_RS24260	0.87	+0.1
5,431,681	+		PFLU_RS24260	0.87	+0.7
5,431,681	+		PFLU_RS24260	0.87	-2.3
5,431,681	+		PFLU_RS24260	0.87	+1.0
5,431,681	+		PFLU_RS24260	0.87	+1.4
5,431,681	+		PFLU_RS24260	0.87	-1.4
5,431,681	+		PFLU_RS24260	0.87	-1.7
5,431,681	+		PFLU_RS24260	0.87	-0.6
5,431,681	+		PFLU_RS24260	0.87	-1.1
5,431,681	+		PFLU_RS24260	0.87	+0.3
5,431,681	+		PFLU_RS24260	0.87	-0.7
5,431,681	+		PFLU_RS24260	0.87	-0.0
5,431,681	+		PFLU_RS24260	0.87	-0.3
5,431,682	-		PFLU_RS24260	0.87	+1.7
5,431,682	-		PFLU_RS24260	0.87	-0.6
5,431,682	-		PFLU_RS24260	0.87	-1.2
5,431,682	-		PFLU_RS24260	0.87	+0.2
5,431,682	-		PFLU_RS24260	0.87	-0.8
5,431,682	-		PFLU_RS24260	0.87	+0.3
5,431,682	-		PFLU_RS24260	0.87	-0.9
5,431,682	-		PFLU_RS24260	0.87	-2.3
5,431,682	-		PFLU_RS24260	0.87	-0.9
5,431,682	-		PFLU_RS24260	0.87	+0.1
5,431,682	-		PFLU_RS24260	0.87	-1.5
5,431,682	-		PFLU_RS24260	0.87	+0.7
5,431,682	-		PFLU_RS24260	0.87	-2.9
5,431,682	-		PFLU_RS24260	0.87	-1.8
5,431,682	-		PFLU_RS24260	0.87	+1.9
5,431,682	-		PFLU_RS24260	0.87	-0.7
5,431,682	-		PFLU_RS24260	0.87	-0.7
5,431,682	-		PFLU_RS24260	0.87	-0.5
5,431,682	-		PFLU_RS24260	0.87	+0.0
5,431,682	-		PFLU_RS24260	0.87	+0.6
5,431,682	-		PFLU_RS24260	0.87	+0.0
5,431,682	-		PFLU_RS24260	0.87	+0.3
5,431,682	-		PFLU_RS24260	0.87	-0.2
5,431,682	-		PFLU_RS24260	0.87	+1.9
5,431,682	-		PFLU_RS24260	0.87	-0.7
5,431,682	-		PFLU_RS24260	0.87	+0.9
5,431,682	-		PFLU_RS24260	0.87	+0.1
5,431,682	-		PFLU_RS24260	0.87	+0.3
5,431,793	+				+0.9
5,431,793	+				-0.8
5,431,794	-				-0.1
5,431,794	-				-0.2
5,431,794	-				-0.2
5,431,794	-				-1.0
5,431,794	-				+0.4
5,431,794	-				+1.0
5,431,911	+		PFLU_RS24265	0.11	-0.8
5,431,911	+		PFLU_RS24265	0.11	-0.2
5,431,911	+		PFLU_RS24265	0.11	-0.4
5,431,912	-		PFLU_RS24265	0.11	-0.6