Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12690

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,862,624	+		PFLU_RS12675	0.88	-0.4
2,862,625	-		PFLU_RS12675	0.88	+1.5
2,862,625	-		PFLU_RS12675	0.88	+1.2
2,862,625	-		PFLU_RS12675	0.88	+0.8
2,862,683	+				-1.1
2,862,683	+				+0.7
2,862,684	-				+0.2
2,862,729	+				-1.5
2,862,803	-				-1.1
2,862,828	-		PFLU_RS12680	0.15	+1.3
2,862,995	+		PFLU_RS12680	0.53	-0.1
2,862,995	+		PFLU_RS12680	0.53	+0.7
2,862,995	+		PFLU_RS12680	0.53	+1.0
2,862,995	+		PFLU_RS12680	0.53	-2.0
2,862,995	+		PFLU_RS12680	0.53	-0.4
2,862,995	+		PFLU_RS12680	0.53	+2.5
2,862,996	-		PFLU_RS12680	0.53	-2.8
2,862,996	-		PFLU_RS12680	0.53	+1.6
2,862,996	-		PFLU_RS12680	0.53	+1.2
2,862,996	-		PFLU_RS12680	0.53	-1.0
2,863,135	+		PFLU_RS12680	0.85	+0.0
2,863,136	-		PFLU_RS12680	0.85	-0.8
2,863,136	-		PFLU_RS12680	0.85	-0.0
2,863,136	-		PFLU_RS12680	0.85	-0.4
2,863,136	-		PFLU_RS12680	0.85	+1.5
2,863,139	+		PFLU_RS12680	0.86	+0.2
2,863,139	+		PFLU_RS12680	0.86	+0.6
2,863,146	-		PFLU_RS12680	0.87	-1.6
2,863,209	+				-0.4
2,863,224	-				+0.2
2,863,224	-				-1.4
2,863,224	-				-0.0
2,863,231	+				-0.1
2,863,278	+		PFLU_RS12685	0.14	-1.4
2,863,279	-		PFLU_RS12685	0.15	-0.8
2,863,279	-		PFLU_RS12685	0.15	+2.2
2,863,299	-		PFLU_RS12685	0.21	+0.5
2,863,301	+		PFLU_RS12685	0.21	-0.8
2,863,369	+		PFLU_RS12685	0.42	-1.4
2,863,369	+		PFLU_RS12685	0.42	-0.4
2,863,370	-		PFLU_RS12685	0.42	-0.4
2,863,370	-		PFLU_RS12685	0.42	+1.2
2,863,370	-		PFLU_RS12685	0.42	-0.8
2,863,387	+		PFLU_RS12685	0.47	-0.1
2,863,388	-		PFLU_RS12685	0.47	-0.8
2,863,420	-		PFLU_RS12685	0.57	-0.8
2,863,429	-		PFLU_RS12685	0.60	-1.4
2,863,443	+		PFLU_RS12685	0.64	-2.4
2,863,509	+		PFLU_RS12685	0.84	+0.2
2,863,509	+		PFLU_RS12685	0.84	-0.4
2,863,518	+		PFLU_RS12685	0.86	-0.6
2,863,533	+				-2.1
2,863,533	+				-1.4
2,863,538	+				-0.2
2,863,539	-				-0.4
2,863,539	-				-0.8
2,863,554	+				-0.4
2,863,555	-				+1.8
2,863,555	-				+0.9
2,863,555	-				+0.1
2,863,555	-				-1.0
2,863,571	+				-2.1
2,863,618	+				+1.2
2,863,619	-				+0.2
2,863,680	+				-1.6
2,863,681	-				+0.1
2,863,723	-				-2.3
2,863,723	-				-1.6
2,863,743	-				-0.2
2,863,844	+				-1.4
2,863,844	+				-2.3
2,863,844	+				+1.2
2,863,844	+				-1.6
2,863,845	-				+0.4
2,863,845	-				+4.5
2,863,845	-				+1.5
2,863,845	-				+1.9
2,863,845	-				-1.1
2,863,845	-				-0.1
2,863,845	-				+0.0
2,863,845	-				-1.1
2,863,845	-				-0.1
2,863,845	-				-0.4
2,863,853	+				-1.6
2,863,853	+				-1.6
2,863,872	+				+0.8
2,863,872	+				+0.3
2,863,873	-				+0.7
2,863,873	-				-1.1
2,863,876	+				-2.5
2,863,876	+				-1.4
2,863,877	-				-0.4
2,863,877	-				-0.4
2,863,877	-				-0.2
2,863,877	-				-0.9
2,863,877	-				+1.6
2,863,904	-				-0.4
2,863,907	+				+1.2
2,863,907	+				+1.2
2,863,907	+				+0.2
2,863,907	+				+1.0
2,863,908	-				-1.8
2,863,908	-				+1.2
2,863,908	-				+0.6
2,863,954	+				+1.0
2,863,955	-				+0.0
2,863,955	-				-0.0
2,863,996	+				+2.8
2,863,996	+				-0.4
2,863,996	+				+0.5
2,863,997	-				+0.7
2,863,997	-				+0.5
2,863,997	-				-0.5
2,864,041	-		PFLU_RS12690	0.10	+1.2
2,864,041	-		PFLU_RS12690	0.10	+0.2
2,864,041	-		PFLU_RS12690	0.10	-0.9
2,864,220	+		PFLU_RS12690	0.14	-0.6
2,864,302	-		PFLU_RS12690	0.16	-0.8
2,864,307	+		PFLU_RS12690	0.16	+0.2
2,864,307	+		PFLU_RS12690	0.16	-0.3
2,864,307	+		PFLU_RS12690	0.16	-0.7
2,864,307	+		PFLU_RS12690	0.16	-2.8
2,864,343	-		PFLU_RS12690	0.17	+0.8
2,864,373	+		PFLU_RS12690	0.18	-0.9
2,864,373	+		PFLU_RS12690	0.18	-0.8
2,864,373	+		PFLU_RS12690	0.18	-1.6
2,864,379	+		PFLU_RS12690	0.18	-0.1
2,864,447	+		PFLU_RS12690	0.19	+1.4
2,864,448	-		PFLU_RS12690	0.19	-0.4
2,864,448	-		PFLU_RS12690	0.19	-1.0
2,864,448	-		PFLU_RS12690	0.19	-0.5
2,864,515	+		PFLU_RS12690	0.21	-0.3
2,864,516	-		PFLU_RS12690	0.21	-0.8
2,864,559	+		PFLU_RS12690	0.22	+1.0
2,864,560	-		PFLU_RS12690	0.22	+1.5
2,864,628	+		PFLU_RS12690	0.23	-0.0
2,864,772	-		PFLU_RS12690	0.26	+1.2
2,864,781	+		PFLU_RS12690	0.26	-0.1
2,864,781	+		PFLU_RS12690	0.26	+1.2
2,864,781	+		PFLU_RS12690	0.26	-1.1
2,864,781	+		PFLU_RS12690	0.26	+0.9
2,864,781	+		PFLU_RS12690	0.26	-0.1
2,864,782	-		PFLU_RS12690	0.26	+1.2
2,864,782	-		PFLU_RS12690	0.26	-0.4
2,864,782	-		PFLU_RS12690	0.26	-0.8
2,864,782	-		PFLU_RS12690	0.26	-0.8
2,864,787	+		PFLU_RS12690	0.26	+0.7
2,864,787	+		PFLU_RS12690	0.26	+0.2
2,864,788	-		PFLU_RS12690	0.27	-0.8
2,864,788	-		PFLU_RS12690	0.27	+0.2
2,864,850	+		PFLU_RS12690	0.28	-0.8
2,864,850	+		PFLU_RS12690	0.28	+0.0
2,864,862	+		PFLU_RS12690	0.28	+0.2
2,864,862	+		PFLU_RS12690	0.28	+1.2
2,864,863	-		PFLU_RS12690	0.28	+0.6
2,864,871	+		PFLU_RS12690	0.28	-0.1
2,864,871	+		PFLU_RS12690	0.28	-1.6
2,864,871	+		PFLU_RS12690	0.28	+0.2
2,864,871	+		PFLU_RS12690	0.28	+1.2
2,864,872	-		PFLU_RS12690	0.28	+0.2
2,864,872	-		PFLU_RS12690	0.28	-0.4
2,864,872	-		PFLU_RS12690	0.28	+0.2
2,864,919	+		PFLU_RS12690	0.29	-0.8
2,864,919	+		PFLU_RS12690	0.29	+1.4
2,864,919	+		PFLU_RS12690	0.29	-0.3
2,864,919	+		PFLU_RS12690	0.29	-0.8
2,864,919	+		PFLU_RS12690	0.29	-1.6
2,864,919	+		PFLU_RS12690	0.29	+0.5
2,864,925	+		PFLU_RS12690	0.29	+1.0
2,864,926	-		PFLU_RS12690	0.29	+0.8
2,864,976	+		PFLU_RS12690	0.31	-2.6
2,864,977	-		PFLU_RS12690	0.31	-1.1
2,865,083	+		PFLU_RS12690	0.33	+1.2
2,865,083	+		PFLU_RS12690	0.33	-0.4
2,865,162	+		PFLU_RS12690	0.35	-0.4
2,865,163	-		PFLU_RS12690	0.35	+0.2
2,865,168	+		PFLU_RS12690	0.35	-0.7
2,865,228	+		PFLU_RS12690	0.36	+0.7
2,865,229	-		PFLU_RS12690	0.36	-0.6
2,865,366	+		PFLU_RS12690	0.39	+0.2
2,865,366	+		PFLU_RS12690	0.39	+0.8
2,865,366	+		PFLU_RS12690	0.39	-1.8
2,865,423	+		PFLU_RS12690	0.40	-1.1
2,865,436	-		PFLU_RS12690	0.40	-1.6
2,865,436	-		PFLU_RS12690	0.40	-1.1
2,866,185	+		PFLU_RS12690	0.57	-2.4
2,866,185	+		PFLU_RS12690	0.57	-0.4
2,866,185	+		PFLU_RS12690	0.57	-0.8
2,866,186	-		PFLU_RS12690	0.57	+1.4
2,866,186	-		PFLU_RS12690	0.57	-1.7
2,866,186	-		PFLU_RS12690	0.57	-2.1
2,866,186	-		PFLU_RS12690	0.57	-0.1
2,866,245	+		PFLU_RS12690	0.58	+1.2
2,866,324	-		PFLU_RS12690	0.60	+1.2
2,866,629	+		PFLU_RS12690	0.66	-2.0
2,866,629	+		PFLU_RS12690	0.66	+0.8
2,866,629	+		PFLU_RS12690	0.66	-2.7
2,866,629	+		PFLU_RS12690	0.66	+1.7
2,866,630	-		PFLU_RS12690	0.66	-0.8
2,866,630	-		PFLU_RS12690	0.66	+1.0
2,866,630	-		PFLU_RS12690	0.66	-1.1
2,866,630	-		PFLU_RS12690	0.66	+1.2
2,866,630	-		PFLU_RS12690	0.66	+0.3
2,866,723	-		PFLU_RS12690	0.68	-0.4
2,866,745	-		PFLU_RS12690	0.69	+0.3
2,866,745	-		PFLU_RS12690	0.69	+0.4
2,866,745	-		PFLU_RS12690	0.69	-1.1
2,867,179	+		PFLU_RS12690	0.78	-0.4
2,867,179	+		PFLU_RS12690	0.78	+0.8
2,867,180	-		PFLU_RS12690	0.78	+0.2
2,867,180	-		PFLU_RS12690	0.78	-0.4
2,867,180	-		PFLU_RS12690	0.78	+1.0
2,867,181	+		PFLU_RS12690	0.78	+0.2
2,867,182	-		PFLU_RS12690	0.78	+1.2
2,867,182	-		PFLU_RS12690	0.78	-0.2
2,867,230	+		PFLU_RS12690	0.79	-2.1
2,867,231	-		PFLU_RS12690	0.79	-0.1
2,867,268	+		PFLU_RS12690	0.80	+0.6
2,867,268	+		PFLU_RS12690	0.80	-1.6
2,867,269	-		PFLU_RS12690	0.80	+0.2
2,867,269	-		PFLU_RS12690	0.80	-0.4
2,867,269	-		PFLU_RS12690	0.80	+2.0
2,867,292	+		PFLU_RS12690	0.81	+1.0
2,867,292	+		PFLU_RS12690	0.81	+2.2
2,867,293	-		PFLU_RS12690	0.81	+1.2
2,867,293	-		PFLU_RS12690	0.81	-1.3
2,867,388	-		PFLU_RS12690	0.83	-2.4
2,867,443	-		PFLU_RS12690	0.84	-0.9
2,867,550	+		PFLU_RS12690	0.86	-0.0
2,867,550	+		PFLU_RS12690	0.86	-1.4
2,867,551	-		PFLU_RS12690	0.86	+1.2
2,867,551	-		PFLU_RS12690	0.86	-1.9
2,867,736	+				+1.3
2,867,737	-				-0.4
2,867,737	-				-1.0
2,867,916	+				-1.1
2,867,916	+				-0.8
2,867,917	-				-1.9
2,867,917	-				-0.4
2,867,917	-				-0.5
2,867,917	-				+0.5
2,867,917	-				+1.0
2,868,099	+				+0.6
2,868,099	+				-1.6
2,868,099	+				+1.5
2,868,124	-				-0.4
2,868,316	+				+0.2
2,868,316	+				+0.5
2,868,316	+				-0.8
2,868,339	+				+1.8
2,868,418	-				+0.0
2,868,420	+				+0.2
2,868,420	+				+1.0
2,868,420	+				+1.2
2,868,420	+				+0.5
2,868,420	+				-2.4
2,868,420	+				+0.0
2,868,420	+				-0.6
2,868,420	+				+0.1
2,868,420	+				-0.8
2,868,420	+				-1.1
2,868,420	+				+2.7
2,868,420	+				+0.0
2,868,420	+				-0.6
2,868,420	+				-0.4
2,868,420	+				-0.0
2,868,420	+				+0.2
2,868,420	+				+0.3
2,868,420	+				+0.3
2,868,421	-				+3.2
2,868,421	-				+0.0
2,868,421	-				-1.6
2,868,421	-				-0.1
2,868,421	-				+0.8
2,868,421	-				+2.0
2,868,421	-				-0.4
2,868,421	-				+0.7
2,868,421	-				+0.9
2,868,421	-				-1.9
2,868,421	-				+1.6
2,868,421	-				-0.7
2,868,421	-				+0.0
2,868,421	-				+0.3
2,868,421	-				-0.8
2,868,421	-				+2.4
2,868,432	+				+1.0
2,868,433	-				+0.6
2,868,554	+				-1.4
2,868,555	-				+0.1
2,868,555	-				-0.8
2,868,555	-				+0.2
2,868,555	-				+1.5
2,868,608	+				+0.6
2,868,609	-				+0.0
2,868,609	-				+2.3
2,868,634	+				+0.6
2,868,635	-				-0.6
2,868,693	+				-0.6
2,868,693	+				+3.2
2,868,693	+				-0.4
2,868,693	+				-2.3
2,868,694	-				-0.8
2,868,837	+		PFLU_RS12695	0.16	-2.4
2,868,873	+		PFLU_RS12695	0.17	+0.5
2,868,874	-		PFLU_RS12695	0.17	-1.1
2,869,093	-		PFLU_RS12695	0.26	-2.9
2,869,093	-		PFLU_RS12695	0.26	+1.2