Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28755

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
6,395,816	+				-1.3
6,395,816	+				-0.7
6,395,816	+				-2.6
6,395,817	-				+0.0
6,395,817	-				-0.1
6,395,817	-				+1.7
6,395,846	+		PFLU_RS28750	0.14	+2.2
6,395,847	-		PFLU_RS28750	0.15	+0.9
6,395,866	-		PFLU_RS28750	0.18	-0.7
6,395,909	+		PFLU_RS28750	0.24	-1.1
6,395,910	-		PFLU_RS28750	0.24	-1.1
6,395,910	-		PFLU_RS28750	0.24	+2.3
6,395,927	+		PFLU_RS28750	0.27	+0.1
6,395,927	+		PFLU_RS28750	0.27	-2.2
6,395,928	-		PFLU_RS28750	0.27	-0.9
6,395,928	-		PFLU_RS28750	0.27	+0.2
6,395,928	-		PFLU_RS28750	0.27	+0.5
6,395,928	-		PFLU_RS28750	0.27	-0.5
6,396,035	+		PFLU_RS28750	0.44	-1.7
6,396,035	+		PFLU_RS28750	0.44	-1.3
6,396,174	-		PFLU_RS28750	0.66	+1.1
6,396,174	-		PFLU_RS28750	0.66	+1.0
6,396,174	-		PFLU_RS28750	0.66	-2.3
6,396,174	-		PFLU_RS28750	0.66	-0.0
6,396,174	-		PFLU_RS28750	0.66	+1.6
6,396,420	-				-2.3
6,396,420	-				+0.9
6,396,420	-				-2.1
6,396,420	-				-0.5
6,396,420	-				-0.3
6,396,420	-				-0.7
6,396,420	-				-2.2
6,396,420	-				-2.3
6,396,420	-				-1.1
6,396,420	-				-1.2
6,396,420	-				-2.9
6,396,420	-				-1.5
6,396,420	-				-2.0
6,396,420	-				+3.1
6,396,420	-				-0.3
6,396,420	-				+0.2
6,396,595	+				-0.7
6,396,595	+				-0.8
6,396,595	+				-2.6
6,396,595	+				-0.5
6,396,595	+				-1.4
6,396,596	-				+2.4
6,396,596	-				-0.5
6,396,596	-				-0.5
6,396,596	-				+0.5
6,396,596	-				-0.4
6,396,596	-				-1.8
6,396,661	+				-1.6
6,396,661	+				+0.7
6,396,661	+				-1.4
6,396,845	+		PFLU_RS28755	0.21	-1.6
6,397,095	+		PFLU_RS28755	0.49	-2.7
6,397,095	+		PFLU_RS28755	0.49	-1.4
6,397,095	+		PFLU_RS28755	0.49	-2.1
6,397,095	+		PFLU_RS28755	0.49	-2.2
6,397,095	+		PFLU_RS28755	0.49	-3.2
6,397,095	+		PFLU_RS28755	0.49	-0.9
6,397,095	+		PFLU_RS28755	0.49	-0.9
6,397,095	+		PFLU_RS28755	0.49	-1.5
6,397,096	-		PFLU_RS28755	0.49	-1.0
6,397,096	-		PFLU_RS28755	0.49	-1.4
6,397,096	-		PFLU_RS28755	0.49	-2.3
6,397,096	-		PFLU_RS28755	0.49	-3.1
6,397,096	-		PFLU_RS28755	0.49	-4.4
6,397,096	-		PFLU_RS28755	0.49	-2.9
6,397,096	-		PFLU_RS28755	0.49	+1.3
6,397,096	-		PFLU_RS28755	0.49	+0.1
6,397,096	-		PFLU_RS28755	0.49	-1.2
6,397,096	-		PFLU_RS28755	0.49	-1.1
6,397,096	-		PFLU_RS28755	0.49	-0.1
6,397,099	+		PFLU_RS28755	0.50	-1.0
6,397,099	+		PFLU_RS28755	0.50	-1.8
6,397,099	+		PFLU_RS28755	0.50	-2.5
6,397,099	+		PFLU_RS28755	0.50	-2.1
6,397,099	+		PFLU_RS28755	0.50	-1.9
6,397,099	+		PFLU_RS28755	0.50	-1.2
6,397,099	+		PFLU_RS28755	0.50	-3.1
6,397,099	+		PFLU_RS28755	0.50	-0.1
6,397,099	+		PFLU_RS28755	0.50	-3.0
6,397,100	-		PFLU_RS28755	0.50	-0.5
6,397,100	-		PFLU_RS28755	0.50	-0.3
6,397,100	-		PFLU_RS28755	0.50	-2.7
6,397,100	-		PFLU_RS28755	0.50	-0.7
6,397,100	-		PFLU_RS28755	0.50	-3.5
6,397,100	-		PFLU_RS28755	0.50	-0.2
6,397,100	-		PFLU_RS28755	0.50	-2.4
6,397,310	+		PFLU_RS28755	0.73	-0.7
6,397,310	+		PFLU_RS28755	0.73	-1.7
6,397,310	+		PFLU_RS28755	0.73	-2.9
6,397,310	+		PFLU_RS28755	0.73	-2.5
6,397,310	+		PFLU_RS28755	0.73	-2.6
6,397,311	-		PFLU_RS28755	0.74	-2.4
6,397,311	-		PFLU_RS28755	0.74	-2.5
6,397,311	-		PFLU_RS28755	0.74	-1.7
6,397,311	-		PFLU_RS28755	0.74	-3.1
6,397,339	+		PFLU_RS28755	0.77	+2.7
6,397,339	+		PFLU_RS28755	0.77	+0.9
6,397,339	+		PFLU_RS28755	0.77	-2.3
6,397,339	+		PFLU_RS28755	0.77	-0.9
6,397,340	-		PFLU_RS28755	0.77	-2.3
6,397,340	-		PFLU_RS28755	0.77	-1.1
6,397,405	+		PFLU_RS28755	0.84	-1.4
6,397,405	+		PFLU_RS28755	0.84	+2.1
6,397,405	+		PFLU_RS28755	0.84	+0.3
6,397,406	-		PFLU_RS28755	0.84	-2.3
6,397,406	-		PFLU_RS28755	0.84	-2.9
6,397,406	-		PFLU_RS28755	0.84	+1.1
6,397,406	-		PFLU_RS28755	0.84	-2.2
6,397,462	+				-0.9
6,397,462	+				-3.3
6,397,462	+				+0.9
6,397,462	+				+0.4
6,397,462	+				+0.5
6,397,463	-				-3.1
6,397,463	-				-1.4
6,397,463	-				+0.3
6,397,463	-				-1.0
6,397,463	-				+1.1
6,397,463	-				-1.9
6,397,463	-				-2.3
6,397,463	-				-0.4
6,397,489	+				-1.2
6,397,489	+				-2.5
6,397,489	+				+1.3
6,397,489	+				-3.0
6,397,489	+				-1.0
6,397,489	+				-2.7
6,397,490	-				-2.1
6,397,490	-				-2.7
6,397,490	-				-2.0
6,397,490	-				-1.1
6,397,490	-				-1.2
6,397,490	-				-3.1
6,397,490	-				-0.5
6,397,490	-				-0.3
6,397,490	-				+2.3
6,397,490	-				-1.7
6,397,544	+				-0.7
6,397,544	+				-2.1
6,397,544	+				-1.4
6,397,544	+				-1.2
6,397,544	+				-3.4
6,397,544	+				-1.9
6,397,544	+				+1.5
6,397,544	+				-2.5
6,397,545	-				-1.9
6,397,545	-				-0.6
6,397,545	-				-1.1
6,397,545	-				+2.3
6,397,747	+		PFLU_RS28760	0.22	-1.9
6,397,884	+		PFLU_RS28760	0.37	-0.3
6,397,884	+		PFLU_RS28760	0.37	-2.2
6,397,884	+		PFLU_RS28760	0.37	-3.1
6,397,911	+		PFLU_RS28760	0.40	+1.0
6,397,911	+		PFLU_RS28760	0.40	-0.8
6,397,911	+		PFLU_RS28760	0.40	+1.4
6,397,917	+		PFLU_RS28760	0.41	-0.4
6,397,917	+		PFLU_RS28760	0.41	-2.3
6,397,917	+		PFLU_RS28760	0.41	-1.1
6,397,918	-		PFLU_RS28760	0.41	-2.7
6,397,918	-		PFLU_RS28760	0.41	-2.2
6,397,918	-		PFLU_RS28760	0.41	+0.5
6,397,918	-		PFLU_RS28760	0.41	-0.3
6,397,918	-		PFLU_RS28760	0.41	-2.3
6,397,918	-		PFLU_RS28760	0.41	-1.8
6,397,931	-		PFLU_RS28760	0.42	-2.2
6,397,932	+		PFLU_RS28760	0.42	-2.3
6,397,932	+		PFLU_RS28760	0.42	+0.7
6,397,932	+		PFLU_RS28760	0.42	-2.8
6,397,932	+		PFLU_RS28760	0.42	+0.9
6,397,932	+		PFLU_RS28760	0.42	-1.8
6,397,932	+		PFLU_RS28760	0.42	-2.3
6,397,932	+		PFLU_RS28760	0.42	-2.3
6,397,932	+		PFLU_RS28760	0.42	-1.3
6,397,932	+		PFLU_RS28760	0.42	+0.1
6,397,932	+		PFLU_RS28760	0.42	-1.9
6,397,932	+		PFLU_RS28760	0.42	+0.0
6,397,932	+		PFLU_RS28760	0.42	-2.0
6,397,933	-		PFLU_RS28760	0.43	-2.5
6,397,933	-		PFLU_RS28760	0.43	-2.5
6,397,933	-		PFLU_RS28760	0.43	-1.2
6,397,933	-		PFLU_RS28760	0.43	-0.7
6,397,933	-		PFLU_RS28760	0.43	-2.0
6,397,933	-		PFLU_RS28760	0.43	-1.2
6,398,040	+		PFLU_RS28760	0.54	-1.5
6,398,040	+		PFLU_RS28760	0.54	-0.7
6,398,040	+		PFLU_RS28760	0.54	-2.5
6,398,041	-		PFLU_RS28760	0.54	-1.5
6,398,041	-		PFLU_RS28760	0.54	-1.3
6,398,041	-		PFLU_RS28760	0.54	-0.3
6,398,041	-		PFLU_RS28760	0.54	-2.3
6,398,041	-		PFLU_RS28760	0.54	-1.9
6,398,041	-		PFLU_RS28760	0.54	+1.3
6,398,041	-		PFLU_RS28760	0.54	-2.0
6,398,130	+		PFLU_RS28760	0.64	-3.0
6,398,131	-		PFLU_RS28760	0.64	-2.1
6,398,131	-		PFLU_RS28760	0.64	-2.4
6,398,131	-		PFLU_RS28760	0.64	-0.7
6,398,143	-		PFLU_RS28760	0.65	-2.2
6,398,211	+		PFLU_RS28760	0.73	-1.2
6,398,211	+		PFLU_RS28760	0.73	-0.5
6,398,211	+		PFLU_RS28760	0.73	-1.9
6,398,211	+		PFLU_RS28760	0.73	+0.5
6,398,211	+		PFLU_RS28760	0.73	-1.9
6,398,212	-		PFLU_RS28760	0.73	+0.1
6,398,212	-		PFLU_RS28760	0.73	-0.9
6,398,212	-		PFLU_RS28760	0.73	-0.6
6,398,212	-		PFLU_RS28760	0.73	+0.1
6,398,212	-		PFLU_RS28760	0.73	+0.7
6,398,212	-		PFLU_RS28760	0.73	-2.1
6,398,238	+		PFLU_RS28760	0.76	+1.0
6,398,238	+		PFLU_RS28760	0.76	-2.1
6,398,238	+		PFLU_RS28760	0.76	-0.8
6,398,238	+		PFLU_RS28760	0.76	-1.7
6,398,238	+		PFLU_RS28760	0.76	-2.5
6,398,238	+		PFLU_RS28760	0.76	-1.5
6,398,239	-		PFLU_RS28760	0.76	-3.3
6,398,239	-		PFLU_RS28760	0.76	-1.6
6,398,239	-		PFLU_RS28760	0.76	+0.5
6,398,239	-		PFLU_RS28760	0.76	-2.3
6,398,239	-		PFLU_RS28760	0.76	-1.0
6,398,239	-		PFLU_RS28760	0.76	-2.1
6,398,239	-		PFLU_RS28760	0.76	-3.3
6,398,239	-		PFLU_RS28760	0.76	-0.4
6,398,239	-		PFLU_RS28760	0.76	-1.6
6,398,239	-		PFLU_RS28760	0.76	-2.6
6,398,280	+		PFLU_RS28760	0.80	-2.1
6,398,280	+		PFLU_RS28760	0.80	+0.7
6,398,280	+		PFLU_RS28760	0.80	-0.8
6,398,280	+		PFLU_RS28760	0.80	-1.7
6,398,280	+		PFLU_RS28760	0.80	-3.2
6,398,280	+		PFLU_RS28760	0.80	+0.0
6,398,280	+		PFLU_RS28760	0.80	-1.0
6,398,280	+		PFLU_RS28760	0.80	-1.2
6,398,280	+		PFLU_RS28760	0.80	-3.3
6,398,280	+		PFLU_RS28760	0.80	-0.1
6,398,280	+		PFLU_RS28760	0.80	-1.4
6,398,280	+		PFLU_RS28760	0.80	-1.2
6,398,280	+		PFLU_RS28760	0.80	-1.6
6,398,280	+		PFLU_RS28760	0.80	-1.2
6,398,280	+		PFLU_RS28760	0.80	-2.2
6,398,280	+		PFLU_RS28760	0.80	-2.7
6,398,281	-		PFLU_RS28760	0.80	+1.4
6,398,281	-		PFLU_RS28760	0.80	+0.7
6,398,281	-		PFLU_RS28760	0.80	-3.3
6,398,281	-		PFLU_RS28760	0.80	-0.2
6,398,281	-		PFLU_RS28760	0.80	-1.9
6,398,281	-		PFLU_RS28760	0.80	+0.2
6,398,281	-		PFLU_RS28760	0.80	-3.4
6,398,281	-		PFLU_RS28760	0.80	-2.5
6,398,281	-		PFLU_RS28760	0.80	-2.2
6,398,281	-		PFLU_RS28760	0.80	-2.0
6,398,281	-		PFLU_RS28760	0.80	-1.9
6,398,281	-		PFLU_RS28760	0.80	-2.6
6,398,281	-		PFLU_RS28760	0.80	-2.0
6,398,281	-		PFLU_RS28760	0.80	-1.4
6,398,281	-		PFLU_RS28760	0.80	-3.5
6,398,281	-		PFLU_RS28760	0.80	-3.3
6,398,281	-		PFLU_RS28760	0.80	-0.6
6,398,281	-		PFLU_RS28760	0.80	-3.4
6,398,281	-		PFLU_RS28760	0.80	+1.0
6,398,281	-		PFLU_RS28760	0.80	-0.1
6,398,286	+		PFLU_RS28760	0.81	-0.8
6,398,286	+		PFLU_RS28760	0.81	-3.5
6,398,286	+		PFLU_RS28760	0.81	-0.7
6,398,286	+		PFLU_RS28760	0.81	-1.2
6,398,286	+		PFLU_RS28760	0.81	-1.2
6,398,286	+		PFLU_RS28760	0.81	+1.4
6,398,286	+		PFLU_RS28760	0.81	-1.6
6,398,286	+		PFLU_RS28760	0.81	-1.2
6,398,286	+		PFLU_RS28760	0.81	-3.0
6,398,287	-		PFLU_RS28760	0.81	-3.4
6,398,287	-		PFLU_RS28760	0.81	-1.9
6,398,287	-		PFLU_RS28760	0.81	-3.5
6,398,287	-		PFLU_RS28760	0.81	-1.3
6,398,287	-		PFLU_RS28760	0.81	-0.7
6,398,287	-		PFLU_RS28760	0.81	-1.9
6,398,287	-		PFLU_RS28760	0.81	-0.3
6,398,287	-		PFLU_RS28760	0.81	+0.4
6,398,287	-		PFLU_RS28760	0.81	-2.9
6,398,287	-		PFLU_RS28760	0.81	-2.6
6,398,287	-		PFLU_RS28760	0.81	-1.7
6,398,298	+		PFLU_RS28760	0.82	-1.7
6,398,299	-		PFLU_RS28760	0.82	-1.9
6,398,424	-				+0.6
6,398,424	-				-0.1
6,398,455	+				-2.3
6,398,455	+				-1.8
6,398,456	-				-1.8
6,398,456	-				-2.2
6,398,456	-				-0.7
6,398,456	-				-1.6
6,398,470	+				-1.3
6,398,471	-				-2.7
6,398,501	+				-0.3
6,398,501	+				-2.7
6,398,501	+				-3.3
6,398,501	+				-3.7
6,398,501	+				+0.7
6,398,502	-				-2.4
6,398,502	-				-4.4
6,398,502	-				-0.9
6,398,502	-				-1.6
6,398,502	-				+0.2
6,398,502	-				-2.5